RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 PPP2R5CQ13362 524 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 ZNF460Q14592 562 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 TLR1Q15399 786 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 PARP10Q53GL7 1025 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 HSP90AB3PQ58FF7 597 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 SLC45A4Q5BKX6 768 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 CDCA2Q69YH5 1023 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 NBPF10Q6P3W6 841 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 DSTYKQ6XUX3 929 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 LRRC69Q6ZNQ3 347 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 NEK10Q6ZWH5 1172 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 BRAPQ7Z569 592 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 TTC30AQ86WT1 665 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 KIF18BQ86Y91 864 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 SAMD14Q8IZD0 417 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 C1orf127Q8N9H9 656 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 ZNF511Q8NB15 262 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 C1orf162Q8NEQ5 155 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 AHCYL2Q96HN2 611 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 LRCH3Q96II8 777 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 NECAB3Q96P71 396 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 TBCBQ99426 244 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 TREX2Q9BQ50 279 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 VPS11Q9H270 941 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 LRRC4BQ9NT99 713 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 ATP8A2Q9NTI2 1148 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 DCAF16Q9NXF7 216 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 CABP1Q9NZU7 370 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 CCDC39Q9UFE4 941 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 GIMAP2Q9UG22 337 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 RABL2BQ9UNT1 228 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 BCS1LQ9Y276 419 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 RRP7AQ9Y3A4 280 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 A6NNZ2 444 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 MEIS3P2A8K0S8 358 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 ENC1O14682 589 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 PPEF1O14829 653 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 DKC1O60832 514 aaKnown RBP eCLIP5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 ULK1O75385 1050 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 NAT2P11245 290 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 FGFR1P11362 822 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 PPM1AP35813 382 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 IL6STP40189 918 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 ZNF143P52747 638 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 ATXN1P54253 815 aaKnown RBP5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 CENPCQ03188 943 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 BLMHQ13867 455 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 ODF1Q14990 250 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 TAF12Q16514 161 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 CCDC38Q502W7 563 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 GPATCH4Q5T3I0 446 aaKnown RBP5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 YOD1Q5VVQ6 348 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 KIAA1211LQ6NV74 962 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 PGM2L1Q6PCE3 622 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 CCDC149Q6ZUS6 474 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 CATSPER4Q7RTX7 472 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 WAPLQ7Z5K2 1190 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 SDCCAG8Q86SQ7 713 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 TEX11Q8IYF3 940 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 CEP57L1Q8IYX8 460 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 CCDC24Q8N4L8 307 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 FAM160A2Q8N612 972 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 OR2C3Q8N628 320 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 PCYOX1LQ8NBM8 494 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 SLC7A14Q8TBB6 771 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 ADAMTS18Q8TE60 1221 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 CENPIQ92674 756 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 TRERF1Q96PN7 1200 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 ORAI3Q9BRQ5 295 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 TTLL2Q9BWV7 592 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 MKS1Q9NXB0 559 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 NDOR1Q9UHB4 597 aa5.79□□□□□ -1.48
TOPBP1-210ENST00000572787 H3BRJ5 948 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 MASP2O00187 686 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 FRS3O43559 492 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 ATP6V1B1P15313 513 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 CES1P23141 567 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 ATP6V1E1P36543 226 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 IDH3AP50213 366 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 ARSDP51689 593 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 IL2P60568 153 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 GABREP78334 506 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 ICA1Q05084 483 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 SEMA5AQ13591 1074 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 PPP2R5DQ14738 602 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 TRIP4Q15650 581 aaPredicted RBP5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 SV2CQ496J9 727 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 CFAP58Q5T655 872 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 IER5Q5VY09 327 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 SLC6A19Q695T7 634 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 KLHL10Q6JEL2 608 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 RTL10Q7L3V2 364 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 MAP4K3Q8IVH8 894 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 CMTR1Q8N1G2 835 aaKnown RBP5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 FAM156AQ8NDB6 213 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 GSTCDQ8NEC7 633 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 LTV1Q96GA3 475 aaPredicted RBP5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 ZSCAN31Q96LW9 406 aaPredicted RBP5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 RIPOR3Q96MK2 946 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 CHCHD6Q9BRQ6 235 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms