RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 ZSWIM6Q9HCJ5 1215 aa16.14■□□□□ 0.17
RPAIN-211ENST00000572174 VTA1Q9NP79 307 aa16.14■□□□□ 0.17
RPAIN-211ENST00000572174 GPHNQ9NQX3 736 aaPredicted RBP16.14■□□□□ 0.17
RPAIN-211ENST00000572174 FAM184BQ9ULE4 1060 aa16.14■□□□□ 0.17
RPAIN-211ENST00000572174 NAP1L2Q9ULW6 460 aaPredicted RBP16.14■□□□□ 0.17
RPAIN-211ENST00000572174 NID2Q14112 1375 aa16.13■□□□□ 0.17
RPAIN-211ENST00000572174 KBTBD13C9JR72 458 aa16.13■□□□□ 0.17
RPAIN-211ENST00000572174 METAP2P50579 478 aaKnown RBP eCLIP16.13■□□□□ 0.17
RPAIN-211ENST00000572174 ALDH5A1P51649 535 aaPredicted RBP16.13■□□□□ 0.17
RPAIN-211ENST00000572174 CNTN2Q02246 1040 aa16.13■□□□□ 0.17
RPAIN-211ENST00000572174 ACVR2BQ13705 512 aa16.13■□□□□ 0.17
RPAIN-211ENST00000572174 TMTC3Q6ZXV5 915 aa16.13■□□□□ 0.17
RPAIN-211ENST00000572174 CCDC144CPQ8IYA2 1237 aa16.13■□□□□ 0.17
RPAIN-211ENST00000572174 NSUN6Q8TEA1 469 aaKnown RBP16.13■□□□□ 0.17
RPAIN-211ENST00000572174 CUL5Q93034 780 aa16.13■□□□□ 0.17
RPAIN-211ENST00000572174 TCEANC2Q96MN5 208 aa16.13■□□□□ 0.17
RPAIN-211ENST00000572174 AGXT2Q9BYV1 514 aa16.13■□□□□ 0.17
RPAIN-211ENST00000572174 SPC25Q9HBM1 224 aa16.13■□□□□ 0.17
RPAIN-211ENST00000572174 ZHX1Q9UKY1 873 aaPredicted RBP16.13■□□□□ 0.17
RPAIN-211ENST00000572174 DNM1LO00429 736 aa16.12■□□□□ 0.17
RPAIN-211ENST00000572174 CYTH3O43739 400 aa16.12■□□□□ 0.17
RPAIN-211ENST00000572174 SNAI1O95863 264 aaPredicted RBP16.12■□□□□ 0.17
RPAIN-211ENST00000572174 ZNF865P0CJ78 1059 aaPredicted RBP16.12■□□□□ 0.17
RPAIN-211ENST00000572174 GHRHRQ02643 423 aa16.12■□□□□ 0.17
RPAIN-211ENST00000572174 PDE4DQ08499 809 aa16.12■□□□□ 0.17
RPAIN-211ENST00000572174 LHX8Q68G74 356 aa16.12■□□□□ 0.17
RPAIN-211ENST00000572174 SLC30A10Q6XR72 485 aa16.12■□□□□ 0.17
RPAIN-211ENST00000572174 MORC4Q8TE76 937 aa16.12■□□□□ 0.17
RPAIN-211ENST00000572174 BRF1Q92994 677 aa16.12■□□□□ 0.17
RPAIN-211ENST00000572174 FGD4Q96M96 766 aa16.12■□□□□ 0.17
RPAIN-211ENST00000572174 IWS1Q96ST2 819 aa16.12■□□□□ 0.17
RPAIN-211ENST00000572174 ALPK3Q96L96 1907 aa16.11■□□□□ 0.17
RPAIN-211ENST00000572174 SOWAHBA6NEL2 793 aa16.11■□□□□ 0.17
RPAIN-211ENST00000572174 CFBP00751 764 aa16.11■□□□□ 0.17
RPAIN-211ENST00000572174 HSD17B4P51659 736 aa16.11■□□□□ 0.17
RPAIN-211ENST00000572174 ANKRD1Q15327 319 aa16.11■□□□□ 0.17
RPAIN-211ENST00000572174 UBE2Q1Q7Z7E8 422 aa16.11■□□□□ 0.17
RPAIN-211ENST00000572174 RNF180Q86T96 592 aa16.11■□□□□ 0.17
RPAIN-211ENST00000572174 TRPV1Q8NER1 839 aa16.11■□□□□ 0.17
RPAIN-211ENST00000572174 UPF2Q9HAU5 1272 aaKnown RBP16.11■□□□□ 0.17
RPAIN-211ENST00000572174 XPNPEP3Q9NQH7 507 aa16.11■□□□□ 0.17
RPAIN-211ENST00000572174 MYH7BA7E2Y1 1941 aa16.1■□□□□ 0.17
RPAIN-211ENST00000572174 GCOM1H8Y6P7 765 aaPredicted RBP16.1■□□□□ 0.17
RPAIN-211ENST00000572174 DUSP11O75319 330 aaKnown RBP16.1■□□□□ 0.17
RPAIN-211ENST00000572174 PLEKHA8P1O95397 391 aa16.1■□□□□ 0.17
RPAIN-211ENST00000572174 POLR2MP0CAP2 368 aa16.1■□□□□ 0.17
RPAIN-211ENST00000572174 RXRAP19793 462 aa16.1■□□□□ 0.17
RPAIN-211ENST00000572174 PRAMEF19Q5SWL8 479 aa16.1■□□□□ 0.17
RPAIN-211ENST00000572174 SRBD1Q8N5C6 995 aaKnown RBP16.1■□□□□ 0.17
RPAIN-211ENST00000572174 GLT8D2Q9H1C3 349 aa16.1■□□□□ 0.17
RPAIN-211ENST00000572174 C11orf49Q9H6J7 331 aa16.1■□□□□ 0.17
RPAIN-211ENST00000572174 CNTNAP5Q8WYK1 1306 aa16.1■□□□□ 0.17
RPAIN-211ENST00000572174 EVCP57679 992 aa16.09■□□□□ 0.17
RPAIN-211ENST00000572174 AKAP17AQ02040 695 aaKnown RBP16.09■□□□□ 0.17
RPAIN-211ENST00000572174 APOBRQ0VD83 1088 aa16.09■□□□□ 0.17
RPAIN-211ENST00000572174 CCDC144BQ3MJ40 725 aa16.09■□□□□ 0.17
RPAIN-211ENST00000572174 ARHGEF16Q5VV41 709 aa16.09■□□□□ 0.17
RPAIN-211ENST00000572174 IQSEC1Q6DN90 963 aa16.09■□□□□ 0.17
RPAIN-211ENST00000572174 PPP1R18Q6NYC8 613 aa16.09■□□□□ 0.17
RPAIN-211ENST00000572174 CPLX2Q6PUV4 134 aaKnown RBP16.09■□□□□ 0.17
RPAIN-211ENST00000572174 IL27Q8NEV9 243 aa16.09■□□□□ 0.17
RPAIN-211ENST00000572174 SYTL5Q8TDW5 730 aaPredicted RBP16.09■□□□□ 0.17
RPAIN-211ENST00000572174 CCDC12Q8WUD4 166 aaPredicted RBP16.09■□□□□ 0.17
RPAIN-211ENST00000572174 IL17RAQ96F46 866 aa16.09■□□□□ 0.17
RPAIN-211ENST00000572174 RMDN3Q96TC7 470 aa16.09■□□□□ 0.17
RPAIN-211ENST00000572174 PDRG1Q9NUG6 133 aa16.09■□□□□ 0.17
RPAIN-211ENST00000572174 BRPF3Q9ULD4 1205 aa16.09■□□□□ 0.17
RPAIN-211ENST00000572174 Q9Y3F1 56 aa16.09■□□□□ 0.17
RPAIN-211ENST00000572174 NKRFO15226 690 aaKnown RBP eCLIP16.08■□□□□ 0.16
RPAIN-211ENST00000572174 PPP1R11O60927 126 aaPredicted RBP16.08■□□□□ 0.16
RPAIN-211ENST00000572174 CPA1P15085 419 aa16.08■□□□□ 0.16
RPAIN-211ENST00000572174 TAL1P17542 331 aaPredicted RBP16.08■□□□□ 0.16
RPAIN-211ENST00000572174 EDNRBP24530 442 aa16.08■□□□□ 0.16
RPAIN-211ENST00000572174 STXBP2Q15833 593 aa16.08■□□□□ 0.16
RPAIN-211ENST00000572174 PCSK9Q8NBP7 692 aaKnown RBP16.08■□□□□ 0.16
RPAIN-211ENST00000572174 SCFD2Q8WU76 684 aa16.08■□□□□ 0.16
RPAIN-211ENST00000572174 ZNF274Q96GC6 653 aaPredicted RBP16.08■□□□□ 0.16
RPAIN-211ENST00000572174 PAWRQ96IZ0 340 aaKnown RBP16.08■□□□□ 0.16
RPAIN-211ENST00000572174 TSEN34Q9BSV6 310 aaKnown RBP16.08■□□□□ 0.16
RPAIN-211ENST00000572174 EHMT1Q9H9B1 1298 aa16.08■□□□□ 0.16
RPAIN-211ENST00000572174 PIK3CDO00329 1044 aa16.07■□□□□ 0.16
RPAIN-211ENST00000572174 ZEB2O60315 1214 aa16.07■□□□□ 0.16
RPAIN-211ENST00000572174 STAM2O75886 525 aa16.07■□□□□ 0.16
RPAIN-211ENST00000572174 TNFAIP2Q03169 654 aa16.07■□□□□ 0.16
RPAIN-211ENST00000572174 COL9A3Q14050 684 aaPredicted RBP16.07■□□□□ 0.16
RPAIN-211ENST00000572174 SLC35G1Q2M3R5 365 aa16.07■□□□□ 0.16
RPAIN-211ENST00000572174 BRDTQ58F21 947 aaPredicted RBP16.07■□□□□ 0.16
RPAIN-211ENST00000572174 NOL8Q76FK4 1167 aaKnown RBP16.07■□□□□ 0.16
RPAIN-211ENST00000572174 HEATR3Q7Z4Q2 680 aa16.07■□□□□ 0.16
RPAIN-211ENST00000572174 RAB11FIP4Q86YS3 637 aa16.07■□□□□ 0.16
RPAIN-211ENST00000572174 TRIM22Q8IYM9 498 aa16.07■□□□□ 0.16
RPAIN-211ENST00000572174 SMARCC2Q8TAQ2 1214 aa16.07■□□□□ 0.16
RPAIN-211ENST00000572174 PIBF1Q8WXW3 757 aa16.07■□□□□ 0.16
RPAIN-211ENST00000572174 UPF3BQ9BZI7 483 aaKnown RBP16.07■□□□□ 0.16
RPAIN-211ENST00000572174 ALDH8A1Q9H2A2 487 aaPredicted RBP16.07■□□□□ 0.16
RPAIN-211ENST00000572174 PXMP2Q9NR77 195 aa16.07■□□□□ 0.16
RPAIN-211ENST00000572174 NR2E3Q9Y5X4 410 aa16.07■□□□□ 0.16
RPAIN-211ENST00000572174 ASTN1O14525 1302 aa16.06■□□□□ 0.16
RPAIN-211ENST00000572174 SYNRGQ9UMZ2 1314 aa16.06■□□□□ 0.16
RPAIN-211ENST00000572174 MOXD2PA6NHM9 499 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms