RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 VWA5AO00534 786 aa25.09■■□□□ 1.61
UBFD1-210ENST00000571064 RAD21O60216 631 aa25.09■■□□□ 1.61
UBFD1-210ENST00000571064 ACRP10323 421 aa25.09■■□□□ 1.61
UBFD1-210ENST00000571064 CSF2RAP15509 400 aa25.09■■□□□ 1.61
UBFD1-210ENST00000571064 PPIGQ13427 754 aaKnown RBP eCLIP25.09■■□□□ 1.616e-9■□□□□ 9.8
UBFD1-210ENST00000571064 RASIP1Q5U651 963 aa25.09■■□□□ 1.61
UBFD1-210ENST00000571064 RUFY3Q7L099 469 aa25.09■■□□□ 1.61
UBFD1-210ENST00000571064 UPF3BQ9BZI7 483 aaKnown RBP25.09■■□□□ 1.61
UBFD1-210ENST00000571064 ZNF214Q9UL59 606 aaPredicted RBP25.09■■□□□ 1.61
UBFD1-210ENST00000571064 SNAI1O95863 264 aaPredicted RBP25.08■■□□□ 1.61
UBFD1-210ENST00000571064 MRPS5P82675 430 aaKnown RBP25.08■■□□□ 1.61
UBFD1-210ENST00000571064 SART3Q15020 963 aaKnown RBP25.08■■□□□ 1.61
UBFD1-210ENST00000571064 FAM83BQ5T0W9 1011 aa25.08■■□□□ 1.61
UBFD1-210ENST00000571064 ZNF365Q70YC5 407 aa25.08■■□□□ 1.61
UBFD1-210ENST00000571064 PNMA1Q8ND90 353 aa25.08■■□□□ 1.61
UBFD1-210ENST00000571064 UHRF1Q96T88 793 aaPredicted RBP25.08■■□□□ 1.61
UBFD1-210ENST00000571064 KAT14Q9H8E8 782 aa25.08■■□□□ 1.61
UBFD1-210ENST00000571064 FAM184BQ9ULE4 1060 aa25.08■■□□□ 1.61
UBFD1-210ENST00000571064 MTMR7Q9Y216 660 aa25.08■■□□□ 1.61
UBFD1-210ENST00000571064 ERICH2A1L162 156 aa25.07■■□□□ 1.6
UBFD1-210ENST00000571064 IGFBP4P22692 258 aa25.07■■□□□ 1.6
UBFD1-210ENST00000571064 CDK7P50613 346 aa25.07■■□□□ 1.6
UBFD1-210ENST00000571064 Q6ZUG5 572 aa25.07■■□□□ 1.6
UBFD1-210ENST00000571064 REPS2Q8NFH8 660 aa25.07■■□□□ 1.6
UBFD1-210ENST00000571064 GMCL1Q96IK5 515 aa25.07■■□□□ 1.6
UBFD1-210ENST00000571064 GLT1D1Q96MS3 346 aa25.07■■□□□ 1.6
UBFD1-210ENST00000571064 PPP1R12CQ9BZL4 782 aa25.07■■□□□ 1.6
UBFD1-210ENST00000571064 ZHX1Q9UKY1 873 aaPredicted RBP25.07■■□□□ 1.6
UBFD1-210ENST00000571064 PPP1R9AQ9ULJ8 1098 aa25.07■■□□□ 1.6
UBFD1-210ENST00000571064 CYP46A1Q9Y6A2 500 aa25.07■■□□□ 1.6
UBFD1-210ENST00000571064 SNHG28P0DPA3 235 aa25.06■■□□□ 1.6
UBFD1-210ENST00000571064 PDHBP11177 359 aa25.06■■□□□ 1.6
UBFD1-210ENST00000571064 PLA2G5P39877 138 aa25.06■■□□□ 1.6
UBFD1-210ENST00000571064 LIFRP42702 1097 aa25.06■■□□□ 1.6
UBFD1-210ENST00000571064 CCDC174Q6PII3 467 aa25.06■■□□□ 1.6
UBFD1-210ENST00000571064 TBC1D32Q96NH3 1257 aa25.06■■□□□ 1.6
UBFD1-210ENST00000571064 MROH7Q68CQ1 1323 aa25.06■■□□□ 1.6
UBFD1-210ENST00000571064 TMEM199Q8N511 208 aa25.05■■□□□ 1.6
UBFD1-210ENST00000571064 VTI1AQ96AJ9 217 aa25.05■■□□□ 1.6
UBFD1-210ENST00000571064 AGXT2Q9BYV1 514 aa25.05■■□□□ 1.6
UBFD1-210ENST00000571064 UPF2Q9HAU5 1272 aaKnown RBP25.05■■□□□ 1.6
UBFD1-210ENST00000571064 ELP1O95163 1332 aa25.05■■□□□ 1.6
UBFD1-210ENST00000571064 ADCY6O43306 1168 aa25.04■■□□□ 1.6
UBFD1-210ENST00000571064 DUSP11O75319 330 aaKnown RBP25.04■■□□□ 1.6
UBFD1-210ENST00000571064 ASGR1P07306 291 aa25.04■■□□□ 1.6
UBFD1-210ENST00000571064 C6orf222P0C671 652 aaPredicted RBP25.04■■□□□ 1.6
UBFD1-210ENST00000571064 BMP3P12645 472 aa25.04■■□□□ 1.6
UBFD1-210ENST00000571064 KCTD1Q719H9 257 aa25.04■■□□□ 1.6
UBFD1-210ENST00000571064 SGMS1Q86VZ5 419 aa25.04■■□□□ 1.6
UBFD1-210ENST00000571064 FBXL16Q8N461 479 aa25.04■■□□□ 1.6
UBFD1-210ENST00000571064 MSL3Q8N5Y2 521 aaKnown RBP25.04■■□□□ 1.6
UBFD1-210ENST00000571064 DCAF4Q8WV16 495 aa25.04■■□□□ 1.6
UBFD1-210ENST00000571064 BRPF3Q9ULD4 1205 aa25.04■■□□□ 1.6
UBFD1-210ENST00000571064 SYNGAP1Q96PV0 1343 aa25.04■■□□□ 1.6
UBFD1-210ENST00000571064 COPB2P35606 906 aa25.03■■□□□ 1.6
UBFD1-210ENST00000571064 TROAPQ12815 778 aa25.03■■□□□ 1.6
UBFD1-210ENST00000571064 TOB2Q14106 344 aaPredicted RBP25.03■■□□□ 1.6
UBFD1-210ENST00000571064 PSRC1Q6PGN9 363 aaPredicted RBP25.03■■□□□ 1.6
UBFD1-210ENST00000571064 MAMDC4Q6UXC1 1216 aa25.03■■□□□ 1.6
UBFD1-210ENST00000571064 FAM122AQ96E09 287 aa25.03■■□□□ 1.6
UBFD1-210ENST00000571064 DDX11Q96FC9 970 aa25.03■■□□□ 1.6
UBFD1-210ENST00000571064 NKX2-4Q9H2Z4 354 aa25.03■■□□□ 1.6
UBFD1-210ENST00000571064 CXXC1Q9P0U4 656 aaPredicted RBP25.03■■□□□ 1.6
UBFD1-210ENST00000571064 MSRAQ9UJ68 235 aa25.03■■□□□ 1.6
UBFD1-210ENST00000571064 RIPK3Q9Y572 518 aa25.03■■□□□ 1.6
UBFD1-210ENST00000571064 CHD9Q3L8U1 2897 aa25.02■■□□□ 1.6
UBFD1-210ENST00000571064 ARVCFO00192 962 aa25.02■■□□□ 1.6
UBFD1-210ENST00000571064 CST5P28325 142 aaPredicted RBP25.02■■□□□ 1.6
UBFD1-210ENST00000571064 CYP2C18P33260 490 aa25.02■■□□□ 1.6
UBFD1-210ENST00000571064 SLC1A4P43007 532 aa25.02■■□□□ 1.6
UBFD1-210ENST00000571064 RAB30Q15771 203 aa25.02■■□□□ 1.6
UBFD1-210ENST00000571064 TTBK2Q6IQ55 1244 aa25.02■■□□□ 1.6
UBFD1-210ENST00000571064 FAM126BQ8IXS8 530 aa25.02■■□□□ 1.6
UBFD1-210ENST00000571064 ZNF654Q8IZM8 581 aa25.02■■□□□ 1.6
UBFD1-210ENST00000571064 TMTC2Q8N394 836 aa25.02■■□□□ 1.6
UBFD1-210ENST00000571064 PCSK9Q8NBP7 692 aaKnown RBP25.02■■□□□ 1.6
UBFD1-210ENST00000571064 IL27Q8NEV9 243 aa25.02■■□□□ 1.6
UBFD1-210ENST00000571064 NECAB3Q96P71 396 aaPredicted RBP25.02■■□□□ 1.6
UBFD1-210ENST00000571064 MYL10Q9BUA6 226 aa25.02■■□□□ 1.6
UBFD1-210ENST00000571064 PDRG1Q9NUG6 133 aa25.02■■□□□ 1.6
UBFD1-210ENST00000571064 FRMPD2Q68DX3 1309 aaPredicted RBP25.02■■□□□ 1.6
UBFD1-210ENST00000571064 DNAJC25-GNG10A0A024R161 153 aa25.01■■□□□ 1.59
UBFD1-210ENST00000571064 A0A0U1RQG5 324 aaPredicted RBP25.01■■□□□ 1.59
UBFD1-210ENST00000571064 ZNF543Q08ER8 600 aa25.01■■□□□ 1.59
UBFD1-210ENST00000571064 ACVR2BQ13705 512 aa25.01■■□□□ 1.59
UBFD1-210ENST00000571064 SNRNP48Q6IEG0 339 aaKnown RBP25.01■■□□□ 1.59
UBFD1-210ENST00000571064 NFXL1Q6ZNB6 911 aa25.01■■□□□ 1.59
UBFD1-210ENST00000571064 BRF1Q92994 677 aa25.01■■□□□ 1.59
UBFD1-210ENST00000571064 YBX2Q9Y2T7 364 aaKnown RBP25.01■■□□□ 1.59
UBFD1-210ENST00000571064 CCDC69A6NI79 296 aa25■■□□□ 1.59
UBFD1-210ENST00000571064 GOLGA8HP0CJ92 632 aa25■■□□□ 1.59
UBFD1-210ENST00000571064 SLC4A3P48751 1232 aa25■■□□□ 1.59
UBFD1-210ENST00000571064 APOBRQ0VD83 1088 aa25■■□□□ 1.59
UBFD1-210ENST00000571064 CCDC96Q2M329 555 aa25■■□□□ 1.59
UBFD1-210ENST00000571064 CATIPQ7Z7H3 387 aa25■■□□□ 1.59
UBFD1-210ENST00000571064 RAB11FIP4Q86YS3 637 aa25■■□□□ 1.59
UBFD1-210ENST00000571064 HERVK_113Q902F9 699 aa25■■□□□ 1.59
UBFD1-210ENST00000571064 TEX13BQ9BXU2 312 aa25■■□□□ 1.59
UBFD1-210ENST00000571064 ALDH8A1Q9H2A2 487 aaPredicted RBP25■■□□□ 1.59
UBFD1-210ENST00000571064 GPCPD1Q9NPB8 672 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms