RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 LAMA4Q16363 1823 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 ERICH2A1L162 156 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 F5H6K3 240 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 PRC1O43663 620 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 CPA1P15085 419 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 SLC4A3P48751 1232 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 KCNQ1P51787 676 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 KLRC3Q07444 240 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 ACVR2BQ13705 512 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 PPP4R3BQ5MIZ7 849 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 FAM83BQ5T0W9 1011 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 SLFN13Q68D06 897 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 CCSAPQ6IQ19 270 aaPredicted RBP15.55■□□□□ 0.08
CCDC40-205ENST00000571028 FAM126BQ8IXS8 530 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 MB21D2Q8IYB1 491 aaPredicted RBP15.55■□□□□ 0.08
CCDC40-205ENST00000571028 TEX13BQ9BXU2 312 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 LRRC2Q9BYS8 371 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 HIPK3Q9H422 1215 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 TCP11L1Q9NUJ3 509 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 ADAMTS5Q9UNA0 930 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 SLC4A7Q9Y6M7 1214 aa15.55■□□□□ 0.08
CCDC40-205ENST00000571028 ZBBXA8MT70 800 aa15.54■□□□□ 0.08
CCDC40-205ENST00000571028 EIF5BO60841 1220 aaKnown RBP15.54■□□□□ 0.08
CCDC40-205ENST00000571028 NDUFB10O96000 172 aa15.54■□□□□ 0.08
CCDC40-205ENST00000571028 TOP1P11387 765 aaKnown RBP15.54■□□□□ 0.08
CCDC40-205ENST00000571028 ANTXR2P58335 489 aa15.54■□□□□ 0.08
CCDC40-205ENST00000571028 KRT32Q14532 448 aa15.54■□□□□ 0.08
CCDC40-205ENST00000571028 CCDC178Q5BJE1 867 aa15.54■□□□□ 0.08
CCDC40-205ENST00000571028 TMEM67Q5HYA8 995 aa15.54■□□□□ 0.08
CCDC40-205ENST00000571028 SNRNP48Q6IEG0 339 aaKnown RBP15.54■□□□□ 0.08
CCDC40-205ENST00000571028 NOL8Q76FK4 1167 aaKnown RBP15.54■□□□□ 0.08
CCDC40-205ENST00000571028 LRFN3Q9BTN0 628 aa15.54■□□□□ 0.08
CCDC40-205ENST00000571028 KAT14Q9H8E8 782 aa15.54■□□□□ 0.08
CCDC40-205ENST00000571028 GPHNQ9NQX3 736 aaPredicted RBP15.54■□□□□ 0.08
CCDC40-205ENST00000571028 ZNF214Q9UL59 606 aaPredicted RBP15.54■□□□□ 0.08
CCDC40-205ENST00000571028 PLXNA1Q9UIW2 1896 aa15.53■□□□□ 0.08
CCDC40-205ENST00000571028 SNAI1O95863 264 aaPredicted RBP15.53■□□□□ 0.08
CCDC40-205ENST00000571028 MCM5P33992 734 aa15.53■□□□□ 0.08
CCDC40-205ENST00000571028 RABGGTBP53611 331 aa15.53■□□□□ 0.08
CCDC40-205ENST00000571028 GJA9P57773 515 aa15.53■□□□□ 0.08
CCDC40-205ENST00000571028 WTAPQ15007 396 aa15.53■□□□□ 0.08
CCDC40-205ENST00000571028 SART3Q15020 963 aaKnown RBP15.53■□□□□ 0.08
CCDC40-205ENST00000571028 CCDC96Q2M329 555 aa15.53■□□□□ 0.08
CCDC40-205ENST00000571028 CCDC144BQ3MJ40 725 aa15.53■□□□□ 0.08
CCDC40-205ENST00000571028 IFIT1BQ5T764 474 aaKnown RBP15.53■□□□□ 0.08
CCDC40-205ENST00000571028 RCSD1Q6JBY9 416 aa15.53■□□□□ 0.08
CCDC40-205ENST00000571028 MAMDC4Q6UXC1 1216 aa15.53■□□□□ 0.08
CCDC40-205ENST00000571028 NFXL1Q6ZNB6 911 aa15.53■□□□□ 0.08
CCDC40-205ENST00000571028 RASGRP2Q7LDG7 609 aa15.53■□□□□ 0.08
CCDC40-205ENST00000571028 DGKHQ86XP1 1220 aa15.53■□□□□ 0.08
CCDC40-205ENST00000571028 RPUSD2Q8IZ73 545 aaKnown RBP15.53■□□□□ 0.08
CCDC40-205ENST00000571028 ENAHQ8N8S7 591 aaPredicted RBP15.53■□□□□ 0.08
CCDC40-205ENST00000571028 MKL1Q969V6 931 aa15.53■□□□□ 0.08
CCDC40-205ENST00000571028 TTC14Q96N46 770 aa15.53■□□□□ 0.08
CCDC40-205ENST00000571028 ABHD16BQ9H3Z7 469 aa15.53■□□□□ 0.08
CCDC40-205ENST00000571028 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.53■□□□□ 0.08
CCDC40-205ENST00000571028 CHD9Q3L8U1 2897 aa15.52■□□□□ 0.08
CCDC40-205ENST00000571028 FRMPD2Q68DX3 1309 aaPredicted RBP15.52■□□□□ 0.08
CCDC40-205ENST00000571028 CASTP20810 708 aaKnown RBP15.52■□□□□ 0.08
CCDC40-205ENST00000571028 SLC1A4P43007 532 aa15.52■□□□□ 0.08
CCDC40-205ENST00000571028 CCL23P55773 120 aa15.52■□□□□ 0.08
CCDC40-205ENST00000571028 IRX5P78411 483 aaPredicted RBP15.52■□□□□ 0.08
CCDC40-205ENST00000571028 IKQ13123 557 aaPredicted RBP15.52■□□□□ 0.08
CCDC40-205ENST00000571028 TSGA10IPQ3SY00 556 aa15.52■□□□□ 0.08
CCDC40-205ENST00000571028 BLOC1S2Q6QNY1 142 aa15.52■□□□□ 0.08
CCDC40-205ENST00000571028 ZNF467Q7Z7K2 595 aaPredicted RBP15.52■□□□□ 0.08
CCDC40-205ENST00000571028 ANKRD35Q8N283 1001 aa15.52■□□□□ 0.08
CCDC40-205ENST00000571028 KCNB2Q92953 911 aa15.52■□□□□ 0.08
CCDC40-205ENST00000571028 SLF1Q9BQI6 1058 aa15.52■□□□□ 0.08
CCDC40-205ENST00000571028 UPF3AQ9H1J1 476 aaKnown RBP15.52■□□□□ 0.08
CCDC40-205ENST00000571028 EPHX3Q9H6B9 360 aa15.52■□□□□ 0.08
CCDC40-205ENST00000571028 SENP2Q9HC62 589 aa15.52■□□□□ 0.08
CCDC40-205ENST00000571028 GPCPD1Q9NPB8 672 aa15.52■□□□□ 0.08
CCDC40-205ENST00000571028 COG5Q9UP83 839 aa15.52■□□□□ 0.08
CCDC40-205ENST00000571028 PCDHA11Q9Y5I1 949 aa15.52■□□□□ 0.08
CCDC40-205ENST00000571028 EPB41L2O43491 1005 aaKnown RBP15.51■□□□□ 0.07
CCDC40-205ENST00000571028 ATP2A2P16615 1042 aaKnown RBP15.51■□□□□ 0.07
CCDC40-205ENST00000571028 PSMA5P28066 241 aa15.51■□□□□ 0.07
CCDC40-205ENST00000571028 NT5C2P49902 561 aa15.51■□□□□ 0.07
CCDC40-205ENST00000571028 FGD1P98174 961 aa15.51■□□□□ 0.07
CCDC40-205ENST00000571028 SEC23AQ15436 765 aa15.51■□□□□ 0.07
CCDC40-205ENST00000571028 KCTD1Q719H9 257 aa15.51■□□□□ 0.07
CCDC40-205ENST00000571028 DHX32Q7L7V1 743 aaKnown RBP15.51■□□□□ 0.07
CCDC40-205ENST00000571028 PNMA1Q8ND90 353 aa15.51■□□□□ 0.07
CCDC40-205ENST00000571028 GMCL1P1Q8NEA9 526 aa15.51■□□□□ 0.07
CCDC40-205ENST00000571028 NAP1L2Q9ULW6 460 aaPredicted RBP15.51■□□□□ 0.07
CCDC40-205ENST00000571028 GREB1LQ9C091 1923 aaPredicted RBP15.51■□□□□ 0.07
CCDC40-205ENST00000571028 XIRP2A4UGR9 3374 aa15.5■□□□□ 0.07
CCDC40-205ENST00000571028 TMEM232C9JQI7 657 aa15.5■□□□□ 0.07
CCDC40-205ENST00000571028 ZEB2O60315 1214 aa15.5■□□□□ 0.07
CCDC40-205ENST00000571028 ZBED4O75132 1171 aa15.5■□□□□ 0.07
CCDC40-205ENST00000571028 CABYRO75952 493 aa15.5■□□□□ 0.07
CCDC40-205ENST00000571028 CD4P01730 458 aa15.5■□□□□ 0.07
CCDC40-205ENST00000571028 BMP3P12645 472 aa15.5■□□□□ 0.07
CCDC40-205ENST00000571028 MYOGP15173 224 aa15.5■□□□□ 0.07
CCDC40-205ENST00000571028 ARMCX2Q7L311 632 aa15.5■□□□□ 0.07
CCDC40-205ENST00000571028 RAB11FIP4Q86YS3 637 aa15.5■□□□□ 0.07
CCDC40-205ENST00000571028 CPXCR1Q8N123 301 aa15.5■□□□□ 0.07
CCDC40-205ENST00000571028 REPS2Q8NFH8 660 aa15.5■□□□□ 0.07
CCDC40-205ENST00000571028 IGDCC4Q8TDY8 1250 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms