RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 DSC3Q14574 896 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 RABL6Q3YEC7 729 aaPredicted RBP4.04□□□□□ -1.76
SMG6-208ENST00000570874 ERFEQ4G0M1 354 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 LRRC24Q50LG9 513 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 COBLL1Q53SF7 1204 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 CT47A1Q5JQC4 288 aaPredicted RBP4.04□□□□□ -1.76
SMG6-208ENST00000570874 WWC2Q6AWC2 1192 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 HIBCHQ6NVY1 386 aaPredicted RBP4.04□□□□□ -1.76
SMG6-208ENST00000570874 LVRNQ6Q4G3 990 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 KIF6Q6ZMV9 814 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 TOGARAM2Q6ZUX3 1019 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 CATSPER4Q7RTX7 472 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 AACSQ86V21 672 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 SYNPOQ8N3V7 929 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 MAGEB6Q8N7X4 407 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 TEKT1Q969V4 418 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 RILPL2Q969X0 211 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 EAF2Q96CJ1 260 aaPredicted RBP4.04□□□□□ -1.76
SMG6-208ENST00000570874 ZBTB10Q96DT7 871 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 KIF1BPQ96EK5 621 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 EDC3Q96F86 508 aaKnown RBP4.04□□□□□ -1.76
SMG6-208ENST00000570874 FAM89AQ96GI7 184 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 DMRTB1Q96MA1 342 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 CITED4Q96RK1 184 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 NELL2Q99435 816 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 DNAJC7Q99615 494 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 MRPL9Q9BYD2 267 aaKnown RBP4.04□□□□□ -1.76
SMG6-208ENST00000570874 PUS3Q9BZE2 481 aaKnown RBP4.04□□□□□ -1.76
SMG6-208ENST00000570874 OSBPL3Q9H4L5 887 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 RMI1Q9H9A7 625 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 PLCB1Q9NQ66 1216 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 GINM1Q9NU53 330 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 CCDC87Q9NVE4 849 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 RABL2AQ9UBK7 228 aaPredicted RBP4.04□□□□□ -1.76
SMG6-208ENST00000570874 STAP2Q9UGK3 403 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 TSKSQ9UJT2 592 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 PPP1R9AQ9ULJ8 1098 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 LUC7L2Q9Y383 392 aaKnown RBP4.04□□□□□ -1.76
SMG6-208ENST00000570874 R3HCC1Q9Y3T6 440 aaKnown RBP4.04□□□□□ -1.76
SMG6-208ENST00000570874 NAV1Q8NEY1 1877 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 DLEC1Q9Y238 1755 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 LRRC37AA6NMS7 1700 aa4.04□□□□□ -1.76
SMG6-208ENST00000570874 PSME4Q14997 1843 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 SLX4Q8IY92 1834 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 ANO9A1A5B4 782 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 TRIM64A6NGJ6 449 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 MOXD2PA6NHM9 499 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 TRIM64BA6NI03 449 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 TOR1BO14657 336 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 ZBTB24O43167 697 aaPredicted RBP4.03□□□□□ -1.76
SMG6-208ENST00000570874 BBOX1O75936 387 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 CAMTA2O94983 1202 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 KIF20AO95235 890 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 STARD3NLO95772 234 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 GRK2P25098 689 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 CHMLP26374 656 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 GNA15P30679 374 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 SOX5P35711 763 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 IL6STP40189 918 aaPredicted RBP4.03□□□□□ -1.76
SMG6-208ENST00000570874 STAT3P40763 770 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 STT3AP46977 705 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 PLA2G4AP47712 749 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 DGKGP49619 791 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 RENBPP51606 427 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 GUCY2FP51841 1108 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 UBASH3AP57075 661 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 CLDN10P78369 228 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 CCT2P78371 535 aaKnown RBP4.03□□□□□ -1.76
SMG6-208ENST00000570874 DMTNQ08495 405 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 CHAF1AQ13111 956 aaPredicted RBP4.03□□□□□ -1.76
SMG6-208ENST00000570874 G3BP1Q13283 466 aaKnown RBP eCLIP4.03□□□□□ -1.76
SMG6-208ENST00000570874 SQSTM1Q13501 440 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 MTMR3Q13615 1198 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 DSG2Q14126 1118 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 WTAPQ15007 396 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 PPP2R5BQ15173 497 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 OCLNQ16625 522 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 DALRD3Q5D0E6 543 aaKnown RBP4.03□□□□□ -1.76
SMG6-208ENST00000570874 RILPL1Q5EBL4 403 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 ARMC4Q5T2S8 1044 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 AGAP9Q5VTM2 703 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 SUSD4Q5VX71 490 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 CCDC129Q6ZRS4 1044 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 C1orf122Q6ZSJ8 110 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 ATG9AQ7Z3C6 839 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 SLC51AQ86UW1 340 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 NLRP10Q86W26 655 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 SEPT12Q8IYM1 358 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 CCAR2Q8N163 923 aaKnown RBP4.03□□□□□ -1.76
SMG6-208ENST00000570874 DEPDC4Q8N2C3 294 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 STAG2Q8N3U4 1231 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 CCDC24Q8N4L8 307 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 PJA1Q8NG27 643 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 NUP133Q8WUM0 1156 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 HNRNPLLQ8WVV9 542 aaKnown RBP4.03□□□□□ -1.76
SMG6-208ENST00000570874 NLRP7Q8WX94 980 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 DDX12PQ92771 950 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 ERCC4Q92889 916 aaPredicted RBP4.03□□□□□ -1.76
SMG6-208ENST00000570874 GSDMAQ96QA5 445 aa4.03□□□□□ -1.76
SMG6-208ENST00000570874 UIMC1Q96RL1 719 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms