RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 MSL3P1P0C860 447 aa9.33□□□□□ -0.92
CDC27-212ENST00000570818 VIPR1P32241 457 aa9.33□□□□□ -0.92
CDC27-212ENST00000570818 RAB33AQ14088 237 aa9.33□□□□□ -0.92
CDC27-212ENST00000570818 CBX2Q14781 532 aaPredicted RBP9.33□□□□□ -0.92
CDC27-212ENST00000570818 KCNA10Q16322 511 aa9.33□□□□□ -0.92
CDC27-212ENST00000570818 ZC3H14Q6PJT7 736 aaKnown RBP9.33□□□□□ -0.92
CDC27-212ENST00000570818 CPNE8Q86YQ8 564 aa9.33□□□□□ -0.92
CDC27-212ENST00000570818 LZTR1Q8N653 840 aa9.33□□□□□ -0.92
CDC27-212ENST00000570818 USP33Q8TEY7 942 aa9.33□□□□□ -0.92
CDC27-212ENST00000570818 BTN2A2Q8WVV5 523 aa9.33□□□□□ -0.92
CDC27-212ENST00000570818 MMP19Q99542 508 aa9.33□□□□□ -0.92
CDC27-212ENST00000570818 CLEC1BQ9P126 229 aa9.33□□□□□ -0.92
CDC27-212ENST00000570818 KLHL14Q9P2G3 628 aa9.33□□□□□ -0.92
CDC27-212ENST00000570818 SNRPB2P08579 225 aaKnown RBP9.32□□□□□ -0.92
CDC27-212ENST00000570818 PLS3P13797 630 aa9.32□□□□□ -0.92
CDC27-212ENST00000570818 TACR1P25103 407 aa9.32□□□□□ -0.92
CDC27-212ENST00000570818 MAPKAPK2P49137 400 aa9.32□□□□□ -0.92
CDC27-212ENST00000570818 TMC6Q7Z403 805 aa9.32□□□□□ -0.92
CDC27-212ENST00000570818 CELF2-AS1Q8N7Q2 184 aa9.32□□□□□ -0.92
CDC27-212ENST00000570818 CD320Q9NPF0 282 aa9.32□□□□□ -0.92
CDC27-212ENST00000570818 GPRC5CQ9NQ84 441 aa9.32□□□□□ -0.92
CDC27-212ENST00000570818 NUDT5Q9UKK9 219 aa9.32□□□□□ -0.92
CDC27-212ENST00000570818 SMG5Q9UPR3 1016 aaKnown RBP9.32□□□□□ -0.92
CDC27-212ENST00000570818 NPIPB6E9PJ23 425 aa9.31□□□□□ -0.92
CDC27-212ENST00000570818 RFXAPO00287 272 aa9.31□□□□□ -0.92
CDC27-212ENST00000570818 KRT1P04264 644 aa9.31□□□□□ -0.92
CDC27-212ENST00000570818 THBDP07204 575 aa9.31□□□□□ -0.92
CDC27-212ENST00000570818 DBHP09172 617 aa9.31□□□□□ -0.92
CDC27-212ENST00000570818 KCNJ6P48051 423 aa9.31□□□□□ -0.92
CDC27-212ENST00000570818 SLC10A6Q3KNW5 377 aa9.31□□□□□ -0.92
CDC27-212ENST00000570818 NBPF6Q5VWK0 638 aa9.31□□□□□ -0.92
CDC27-212ENST00000570818 E4F1Q66K89 784 aaPredicted RBP9.31□□□□□ -0.92
CDC27-212ENST00000570818 CIAPIN1Q6FI81 312 aa9.31□□□□□ -0.92
CDC27-212ENST00000570818 RPTNQ6XPR3 784 aa9.31□□□□□ -0.92
CDC27-212ENST00000570818 NBPF4Q96M43 638 aa9.31□□□□□ -0.92
CDC27-212ENST00000570818 HIRIP3Q9BW71 556 aaPredicted RBP9.31□□□□□ -0.92
CDC27-212ENST00000570818 MBD1Q9UIS9 605 aaPredicted RBP9.31□□□□□ -0.92
CDC27-212ENST00000570818 JAG1P78504 1218 aa9.3□□□□□ -0.92
CDC27-212ENST00000570818 FZD5Q13467 585 aa9.3□□□□□ -0.92
CDC27-212ENST00000570818 LCE3BQ5TA77 95 aa9.3□□□□□ -0.92
CDC27-212ENST00000570818 ST13P5Q8NFI4 369 aaPredicted RBP9.3□□□□□ -0.92
CDC27-212ENST00000570818 ARMC5Q96C12 935 aa9.3□□□□□ -0.92
CDC27-212ENST00000570818 SGPP1Q9BX95 441 aa9.3□□□□□ -0.92
CDC27-212ENST00000570818 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.3□□□□□ -0.928e-7■■□□□ 12.7
CDC27-212ENST00000570818 CNOT6Q9ULM6 557 aaKnown RBP9.3□□□□□ -0.92
CDC27-212ENST00000570818 RWDD3Q9Y3V2 267 aa9.3□□□□□ -0.92
CDC27-212ENST00000570818 N4BP3O15049 544 aa9.29□□□□□ -0.92
CDC27-212ENST00000570818 MEFVO15553 781 aaPredicted RBP9.29□□□□□ -0.92
CDC27-212ENST00000570818 MYO1BO43795 1136 aa9.29□□□□□ -0.92
CDC27-212ENST00000570818 ECI1P42126 302 aa9.29□□□□□ -0.92
CDC27-212ENST00000570818 KCNAB2Q13303 367 aa9.29□□□□□ -0.92
CDC27-212ENST00000570818 SF3A1Q15459 793 aaKnown RBP9.29□□□□□ -0.92
CDC27-212ENST00000570818 KRTAP19-4Q3LI73 84 aa9.29□□□□□ -0.92
CDC27-212ENST00000570818 PLEKHN1Q494U1 663 aaPredicted RBP9.29□□□□□ -0.92
CDC27-212ENST00000570818 SGSM3Q96HU1 749 aa9.29□□□□□ -0.92
CDC27-212ENST00000570818 LGR4Q9BXB1 951 aa9.29□□□□□ -0.92
CDC27-212ENST00000570818 GULP1Q9UBP9 304 aa9.29□□□□□ -0.92
CDC27-212ENST00000570818 IRAK3Q9Y616 596 aa9.29□□□□□ -0.92
CDC27-212ENST00000570818 C7orf72A4D263 438 aa9.28□□□□□ -0.92
CDC27-212ENST00000570818 F8W031 263 aaPredicted RBP9.28□□□□□ -0.92
CDC27-212ENST00000570818 SCG5P05408 212 aa9.28□□□□□ -0.92
CDC27-212ENST00000570818 GTF2F1P35269 517 aaKnown RBP eCLIP9.28□□□□□ -0.92
CDC27-212ENST00000570818 GTF2A2P52657 109 aa9.28□□□□□ -0.92
CDC27-212ENST00000570818 LINC00310P59036 64 aa9.28□□□□□ -0.92
CDC27-212ENST00000570818 HSP90AA2PQ14568 343 aaPredicted RBP9.28□□□□□ -0.92
CDC27-212ENST00000570818 ZNF385BQ569K4 471 aa9.28□□□□□ -0.92
CDC27-212ENST00000570818 LRRC56Q8IYG6 542 aaPredicted RBP9.28□□□□□ -0.92
CDC27-212ENST00000570818 NETO2Q8NC67 525 aa9.28□□□□□ -0.92
CDC27-212ENST00000570818 DIO2Q92813 273 aa9.28□□□□□ -0.92
CDC27-212ENST00000570818 SIGLEC10Q96LC7 697 aa9.28□□□□□ -0.92
CDC27-212ENST00000570818 CNTD2Q9H8S5 307 aa9.28□□□□□ -0.92
CDC27-212ENST00000570818 GCM1Q9NP62 436 aa9.28□□□□□ -0.92
CDC27-212ENST00000570818 NUAK1O60285 661 aa9.27□□□□□ -0.93
CDC27-212ENST00000570818 TARBP2Q15633 366 aaKnown RBP9.27□□□□□ -0.93
CDC27-212ENST00000570818 NPLOC4Q8TAT6 608 aa9.27□□□□□ -0.93
CDC27-212ENST00000570818 FRS2Q8WU20 508 aa9.27□□□□□ -0.93
CDC27-212ENST00000570818 KCTD13Q8WZ19 329 aa9.27□□□□□ -0.93
CDC27-212ENST00000570818 PEX11GQ96HA9 241 aa9.27□□□□□ -0.93
CDC27-212ENST00000570818 TBX1O43435 398 aa9.26□□□□□ -0.93
CDC27-212ENST00000570818 GLI4P10075 376 aa9.26□□□□□ -0.93
CDC27-212ENST00000570818 PFKLP17858 780 aa9.26□□□□□ -0.93
CDC27-212ENST00000570818 RPL11P62913 178 aaKnown RBP9.26□□□□□ -0.93
CDC27-212ENST00000570818 PPP2R2AP63151 447 aa9.26□□□□□ -0.93
CDC27-212ENST00000570818 ACBD5Q5T8D3 534 aaPredicted RBP9.26□□□□□ -0.93
CDC27-212ENST00000570818 LRRC47Q8N1G4 583 aaKnown RBP9.26□□□□□ -0.93
CDC27-212ENST00000570818 MZB1Q8WU39 189 aa9.26□□□□□ -0.93
CDC27-212ENST00000570818 ZNF669Q96BR6 464 aaPredicted RBP9.26□□□□□ -0.93
CDC27-212ENST00000570818 TIMM13Q9Y5L4 95 aaPredicted RBP9.26□□□□□ -0.93
CDC27-212ENST00000570818 FUCA1P04066 466 aa9.25□□□□□ -0.93
CDC27-212ENST00000570818 GFRA1P56159 465 aa9.25□□□□□ -0.93
CDC27-212ENST00000570818 SLC9A5Q14940 896 aa9.25□□□□□ -0.93
CDC27-212ENST00000570818 WWC2Q6AWC2 1192 aa9.25□□□□□ -0.93
CDC27-212ENST00000570818 LDHDQ86WU2 507 aa9.25□□□□□ -0.93
CDC27-212ENST00000570818 TMEM151BQ8IW70 566 aa9.25□□□□□ -0.93
CDC27-212ENST00000570818 PPIL6Q8IXY8 311 aa9.25□□□□□ -0.93
CDC27-212ENST00000570818 MTA3Q9BTC8 594 aa9.25□□□□□ -0.93
CDC27-212ENST00000570818 BTG4Q9NY30 223 aa9.25□□□□□ -0.93
CDC27-212ENST00000570818 MARCH2Q9P0N8 246 aa9.25□□□□□ -0.93
CDC27-212ENST00000570818 SIRPGQ9P1W8 387 aa9.25□□□□□ -0.93
CDC27-212ENST00000570818 A0A1W2PQU0 124 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms