RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 STK11IPQ8N1F8 1099 aa12.5□□□□□ -0.41
CTDNEP1-202ENST00000570380 NEK9Q8TD19 979 aa12.5□□□□□ -0.41
CTDNEP1-202ENST00000570380 PURBQ96QR8 312 aaKnown RBP12.5□□□□□ -0.41
CTDNEP1-202ENST00000570380 MTG1Q9BT17 334 aaPredicted RBP12.5□□□□□ -0.41
CTDNEP1-202ENST00000570380 ZBED2Q9BTP6 218 aa12.5□□□□□ -0.41
CTDNEP1-202ENST00000570380 SLC4A4Q9Y6R1 1079 aa12.5□□□□□ -0.41
CTDNEP1-202ENST00000570380 NLRC5Q86WI3 1866 aa12.5□□□□□ -0.41
CTDNEP1-202ENST00000570380 ATG2AQ2TAZ0 1938 aa12.5□□□□□ -0.41
CTDNEP1-202ENST00000570380 TECTAO75443 2155 aa12.5□□□□□ -0.41
CTDNEP1-202ENST00000570380 IGKV6D-41A0A0C4DH26 115 aa12.49□□□□□ -0.41
CTDNEP1-202ENST00000570380 LINC01553A4QN01 128 aa12.49□□□□□ -0.41
CTDNEP1-202ENST00000570380 BFSP2Q13515 415 aa12.49□□□□□ -0.41
CTDNEP1-202ENST00000570380 PUS10Q3MIT2 529 aaKnown RBP12.49□□□□□ -0.41
CTDNEP1-202ENST00000570380 NFRKBQ6P4R8 1299 aa12.49□□□□□ -0.41
CTDNEP1-202ENST00000570380 MORC4Q8TE76 937 aa12.49□□□□□ -0.41
CTDNEP1-202ENST00000570380 MKL1Q969V6 931 aa12.49□□□□□ -0.41
CTDNEP1-202ENST00000570380 DDRGK1Q96HY6 314 aa12.49□□□□□ -0.41
CTDNEP1-202ENST00000570380 TRERF1Q96PN7 1200 aa12.49□□□□□ -0.41
CTDNEP1-202ENST00000570380 TGS1Q96RS0 853 aaKnown RBP12.49□□□□□ -0.41
CTDNEP1-202ENST00000570380 VTA1Q9NP79 307 aa12.49□□□□□ -0.41
CTDNEP1-202ENST00000570380 MYO7AQ13402 2215 aa12.49□□□□□ -0.41
CTDNEP1-202ENST00000570380 MICAL3Q7RTP6 2002 aa12.49□□□□□ -0.41
CTDNEP1-202ENST00000570380 C19orf67A6NJJ6 358 aa12.48□□□□□ -0.41
CTDNEP1-202ENST00000570380 H3BQ06 376 aaPredicted RBP12.48□□□□□ -0.41
CTDNEP1-202ENST00000570380 GJB5O95377 273 aa12.48□□□□□ -0.41
CTDNEP1-202ENST00000570380 FDX1P10109 184 aa12.48□□□□□ -0.41
CTDNEP1-202ENST00000570380 CPT1AP50416 773 aa12.48□□□□□ -0.41
CTDNEP1-202ENST00000570380 ZP2Q05996 745 aa12.48□□□□□ -0.41
CTDNEP1-202ENST00000570380 MUM1L1Q5H9M0 696 aa12.48□□□□□ -0.41
CTDNEP1-202ENST00000570380 ERC1Q8IUD2 1116 aa12.48□□□□□ -0.41
CTDNEP1-202ENST00000570380 LRRC47Q8N1G4 583 aaKnown RBP12.48□□□□□ -0.41
CTDNEP1-202ENST00000570380 RAD9AQ99638 391 aa12.48□□□□□ -0.41
CTDNEP1-202ENST00000570380 WDR11Q9BZH6 1224 aa12.48□□□□□ -0.41
CTDNEP1-202ENST00000570380 MKNK2Q9HBH9 465 aa12.48□□□□□ -0.41
CTDNEP1-202ENST00000570380 PAG1Q9NWQ8 432 aa12.48□□□□□ -0.41
CTDNEP1-202ENST00000570380 CYP39A1Q9NYL5 469 aa12.48□□□□□ -0.41
CTDNEP1-202ENST00000570380 ARPP21Q9UBL0 812 aaPredicted RBP12.48□□□□□ -0.41
CTDNEP1-202ENST00000570380 TMEM232C9JQI7 657 aa12.47□□□□□ -0.41
CTDNEP1-202ENST00000570380 RBAK-RBAKDNI3L0D1 243 aa12.47□□□□□ -0.41
CTDNEP1-202ENST00000570380 BMP3P12645 472 aa12.47□□□□□ -0.41
CTDNEP1-202ENST00000570380 ALAS1P13196 640 aa12.47□□□□□ -0.41
CTDNEP1-202ENST00000570380 TCTN1Q2MV58 587 aa12.47□□□□□ -0.41
CTDNEP1-202ENST00000570380 TKFCQ3LXA3 575 aa12.47□□□□□ -0.41
CTDNEP1-202ENST00000570380 SLFN13Q68D06 897 aa12.47□□□□□ -0.41
CTDNEP1-202ENST00000570380 RPAP2Q8IXW5 612 aaPredicted RBP12.47□□□□□ -0.41
CTDNEP1-202ENST00000570380 GMCL1P1Q8NEA9 526 aa12.47□□□□□ -0.41
CTDNEP1-202ENST00000570380 RHPN1Q8TCX5 695 aa12.47□□□□□ -0.41
CTDNEP1-202ENST00000570380 CEP95Q96GE4 821 aa12.47□□□□□ -0.41
CTDNEP1-202ENST00000570380 MFSD14AQ96MC6 490 aa12.47□□□□□ -0.41
CTDNEP1-202ENST00000570380 GPHNQ9NQX3 736 aaPredicted RBP12.47□□□□□ -0.41
CTDNEP1-202ENST00000570380 MTMR4Q9NYA4 1195 aa12.47□□□□□ -0.41
CTDNEP1-202ENST00000570380 KMT2EQ8IZD2 1858 aa12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 ZDBF2Q9HCK1 2354 aa12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 RBM47A0AV96 593 aaKnown RBP12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 ST18O60284 1047 aa12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 STAT2P52630 851 aa12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 PTPN11Q06124 597 aaPredicted RBP12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 UBE3CQ15386 1083 aa12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 LRRFIP1Q32MZ4 808 aaKnown RBP12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 SBK1Q52WX2 424 aa12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 CEP85Q6P2H3 762 aa12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 CNKSR3Q6P9H4 555 aa12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 PRSS33Q8NF86 280 aa12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 OR6J1Q8NGC5 347 aa12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 AFAP1L1Q8TED9 768 aa12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 CTAGE1Q96RT6 745 aa12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 C17orf80Q9BSJ5 609 aa12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.46□□□□□ -0.414e-6■□□□□ 11.1
CTDNEP1-202ENST00000570380 PUS7LQ9H0K6 701 aaKnown RBP12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 PRKAG3Q9UGI9 489 aa12.46□□□□□ -0.41
CTDNEP1-202ENST00000570380 MINDY4BA8MYZ0 360 aa12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 NBNO60934 754 aa12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 TTLL1O95922 423 aa12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 IRS1P35568 1242 aa12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 SNAP25P60880 206 aa12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 PTGISQ16647 500 aa12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 ZKSCAN2Q63HK3 967 aa12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 FAM117BQ6P1L5 589 aa12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 NSMFQ6X4W1 530 aa12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 FBXO22Q8NEZ5 403 aa12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 CHURC1Q8WUH1 139 aa12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 STAG1Q8WVM7 1258 aa12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 CHMP4CQ96CF2 233 aa12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 MRPL38Q96DV4 380 aaKnown RBP12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 BOLA2Q9H3K6 86 aa12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 SYNPO2Q9UMS6 1093 aa12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 NOD1Q9Y239 953 aa12.45□□□□□ -0.42
CTDNEP1-202ENST00000570380 RALGAPA2Q2PPJ7 1873 aa12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 ABHD14A-ACY1A0A1B0GW23 586 aa12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 A6NJR5 290 aa12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 GSG1L2A8MUP6 293 aa12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 KPNA6O60684 536 aa12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 PRDM1O75626 825 aa12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 CXCL10P02778 98 aa12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 SELPP16109 830 aa12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 ALDH5A1P51649 535 aaPredicted RBP12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 IER5LQ5T953 404 aa12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 LRRC8DQ7L1W4 858 aa12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 FAM160B2Q86V87 743 aa12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 ADHFE1Q8IWW8 467 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms