RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 RAD50Q92878 1312 aa10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 TIMP1P01033 207 aa10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 PDE4AP27815 886 aa10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 RPS6P62753 249 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 CDC37Q16543 378 aaPredicted RBP10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 C9orf50Q5SZB4 431 aa10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 TAPT1Q6NXT6 567 aa10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 SLC30A10Q6XR72 485 aa10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 RALYLQ86SE5 291 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 MCF2L2Q86YR7 1114 aa10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 TMEM199Q8N511 208 aa10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 ENAHQ8N8S7 591 aaPredicted RBP10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 SLC17A8Q8NDX2 589 aa10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 FAM161BQ96MY7 647 aa10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 CPVLQ9H3G5 476 aa10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 DDX49Q9Y6V7 483 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 U3KPZ7 1027 aaPredicted RBP10.43□□□□□ -0.74
NPLOC4-204ENST00000570324 ABCB11O95342 1321 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 MYL3P08590 195 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 GSPT1P15170 499 aaKnown RBP10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 CPT1AP50416 773 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 CDK7P50613 346 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 PPIGQ13427 754 aaKnown RBP eCLIP10.42□□□□□ -0.746e-7■■□□□ 12.3
NPLOC4-204ENST00000570324 ITGA7Q13683 1181 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 SART3Q15020 963 aaKnown RBP10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 PPP2R5BQ15173 497 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 DUSP28Q4G0W2 176 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 MFSD5Q6N075 450 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 FBXO11Q86XK2 927 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 ADGRF4Q8IZF3 695 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 RGS22Q8NE09 1264 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 DNERQ8NFT8 737 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 OR6J1Q8NGC5 347 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 MORC4Q8TE76 937 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 CLEC4DQ8WXI8 215 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 ANKS1AQ92625 1134 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 SEZ6LQ9BYH1 1024 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 PPP1R12CQ9BZL4 782 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 POLR3EQ9NVU0 708 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 MTMR10Q9NXD2 777 aa10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 GNEQ9Y223 722 aaKnown RBP10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 MRPL11Q9Y3B7 192 aaKnown RBP10.42□□□□□ -0.74
NPLOC4-204ENST00000570324 ASTN1O14525 1302 aa10.41□□□□□ -0.74
NPLOC4-204ENST00000570324 IFIT3O14879 490 aaKnown RBP10.41□□□□□ -0.74
NPLOC4-204ENST00000570324 NKRFO15226 690 aaKnown RBP eCLIP10.41□□□□□ -0.74
NPLOC4-204ENST00000570324 CTAGE5O15320 804 aa10.41□□□□□ -0.74
NPLOC4-204ENST00000570324 ITGB8P26012 769 aa10.41□□□□□ -0.74
NPLOC4-204ENST00000570324 CHMLP26374 656 aa10.41□□□□□ -0.74
NPLOC4-204ENST00000570324 NKX3-2P78367 333 aa10.41□□□□□ -0.74
NPLOC4-204ENST00000570324 FAM109BQ6ICB4 259 aaPredicted RBP10.41□□□□□ -0.74
NPLOC4-204ENST00000570324 SCFD2Q8WU76 684 aa10.41□□□□□ -0.74
NPLOC4-204ENST00000570324 TBX21Q9UL17 535 aa10.41□□□□□ -0.74
NPLOC4-204ENST00000570324 STXBP5LQ9Y2K9 1186 aa10.41□□□□□ -0.74
NPLOC4-204ENST00000570324 KLRF2D3W0D1 207 aa10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 CFBP00751 764 aa10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 TXNP10599 105 aaKnown RBP10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 SMAD3P84022 425 aaKnown RBP10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 TRAF1Q13077 416 aa10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 TTLL4Q14679 1199 aa10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 QRICH1Q2TAL8 776 aa10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 FAM47CQ5HY64 1035 aa10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 TMEM63BQ5T3F8 832 aa10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 ARHGEF16Q5VV41 709 aa10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 FAM126BQ8IXS8 530 aa10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 NCOA7Q8NI08 942 aa10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 NSUN6Q8TEA1 469 aaKnown RBP10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 AMNQ9BXJ7 453 aa10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 MAF1Q9H063 256 aa10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 JMJD4Q9H9V9 463 aa10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 LRRC37A2A6NM11 1700 aa10.4□□□□□ -0.74
NPLOC4-204ENST00000570324 MYH6P13533 1939 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 RBM47A0AV96 593 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 KPNA6O60684 536 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 CYP21A2P08686 494 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 SUPT20HL2P0C7V6 817 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 CSF2RAP15509 400 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 PTGS1P23219 599 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 CYP2C18P33260 490 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 EPHB4P54760 987 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 CHMP4BP1P59074 171 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 PSMC6P62333 389 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 PTH1RQ03431 593 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 WTAPQ15007 396 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 STXBP2Q15833 593 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 PSRC1Q6PGN9 363 aaPredicted RBP10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 SEPT14Q6ZU15 432 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 CYB5R4Q7L1T6 521 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 HOMER1Q86YM7 354 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 TAAR1Q96RJ0 339 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 RMDN3Q96TC7 470 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 MTG1Q9BT17 334 aaPredicted RBP10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 IL25Q9H293 177 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 MTIF3Q9H2K0 278 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 HIPK3Q9H422 1215 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 LCTP09848 1927 aa10.39□□□□□ -0.75
NPLOC4-204ENST00000570324 E7EWF7 191 aa10.38□□□□□ -0.75
NPLOC4-204ENST00000570324 SGSM2O43147 1006 aa10.38□□□□□ -0.75
NPLOC4-204ENST00000570324 CD4P01730 458 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms