RNA–Protein interactions for RNA: ENST00000570270.1

TAF1C-223, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

TSL 3

Gene TAF1C, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-223	ENST00000570270	VAT1L	Q9HCJ6	419 aa		15.95	■□□□□ 0.14
TAF1C-223	ENST00000570270	ANO2	Q9NQ90	1003 aa		15.95	■□□□□ 0.14
TAF1C-223	ENST00000570270	NKRF	O15226	690 aa	Known RBP eCLIP	15.94	■□□□□ 0.14
TAF1C-223	ENST00000570270	KIF5B	P33176	963 aa		15.94	■□□□□ 0.14
TAF1C-223	ENST00000570270	GNAQ	P50148	359 aa		15.94	■□□□□ 0.14
TAF1C-223	ENST00000570270	FXR1	P51114	621 aa	Known RBP eCLIP	15.94	■□□□□ 0.14
TAF1C-223	ENST00000570270	NKX3-2	P78367	333 aa		15.94	■□□□□ 0.14
TAF1C-223	ENST00000570270	QRICH1	Q2TAL8	776 aa		15.94	■□□□□ 0.14
TAF1C-223	ENST00000570270	TMEM87B	Q96K49	555 aa		15.94	■□□□□ 0.14
TAF1C-223	ENST00000570270	KATNBL1	Q9H079	304 aa		15.94	■□□□□ 0.14
TAF1C-223	ENST00000570270	JMJD4	Q9H9V9	463 aa		15.94	■□□□□ 0.14
TAF1C-223	ENST00000570270		A0A0U1RQG5	324 aa	Predicted RBP	15.93	■□□□□ 0.14
TAF1C-223	ENST00000570270	PALM3	A6NDB9	673 aa	Predicted RBP	15.93	■□□□□ 0.14
TAF1C-223	ENST00000570270	ZBTB5	O15062	677 aa		15.93	■□□□□ 0.14
TAF1C-223	ENST00000570270	CDC45	O75419	566 aa		15.93	■□□□□ 0.14
TAF1C-223	ENST00000570270	ASGR1	P07306	291 aa		15.93	■□□□□ 0.14
TAF1C-223	ENST00000570270	GRM4	Q14833	912 aa		15.93	■□□□□ 0.14
TAF1C-223	ENST00000570270	TRIM60	Q495X7	471 aa		15.93	■□□□□ 0.14
TAF1C-223	ENST00000570270	TLK2	Q86UE8	772 aa		15.93	■□□□□ 0.14
TAF1C-223	ENST00000570270	TDH	Q8IZJ6	230 aa		15.93	■□□□□ 0.14
TAF1C-223	ENST00000570270	CTCFL	Q8NI51	663 aa	Predicted RBP	15.93	■□□□□ 0.14
TAF1C-223	ENST00000570270	NSUN6	Q8TEA1	469 aa	Known RBP	15.93	■□□□□ 0.14
TAF1C-223	ENST00000570270	IWS1	Q96ST2	819 aa		15.93	■□□□□ 0.14
TAF1C-223	ENST00000570270	LZTS2	Q9BRK4	669 aa		15.93	■□□□□ 0.14
TAF1C-223	ENST00000570270	LSG1	Q9H089	658 aa	Known RBP	15.93	■□□□□ 0.14
TAF1C-223	ENST00000570270	PRDM5	Q9NQX1	630 aa	Predicted RBP	15.93	■□□□□ 0.14
TAF1C-223	ENST00000570270	MAD2L2	Q9UI95	211 aa		15.93	■□□□□ 0.14
TAF1C-223	ENST00000570270	CCDC69	A6NI79	296 aa		15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	TLR3	O15455	904 aa	Known RBP	15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	DYNC1LI2	O43237	492 aa	Predicted RBP	15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	CLTB	P09497	229 aa		15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	CALM1	P0DP23	149 aa		15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	CALM2	P0DP24	149 aa		15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	CALM3	P0DP25	149 aa		15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	TLE2	Q04725	743 aa		15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	DUSP28	Q4G0W2	176 aa		15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	TAPT1	Q6NXT6	567 aa		15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	SLC30A10	Q6XR72	485 aa		15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	NFXL1	Q6ZNB6	911 aa		15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	EEPD1	Q7L9B9	569 aa		15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	FBXO16	Q8IX29	292 aa	Predicted RBP	15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	MB21D2	Q8IYB1	491 aa	Predicted RBP	15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	SCFD2	Q8WU76	684 aa		15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	LENG1	Q96BZ8	264 aa	Predicted RBP	15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	WDR11	Q9BZH6	1224 aa		15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	PCDH10	Q9P2E7	1040 aa		15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	GNE	Q9Y223	722 aa	Known RBP	15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	MYH6	P13533	1939 aa		15.92	■□□□□ 0.14
TAF1C-223	ENST00000570270	SLC27A2	O14975	620 aa		15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	DDAH1	O94760	285 aa		15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	SMARCA1	P28370	1054 aa		15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	CPT1A	P50416	773 aa		15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	MDM2	Q00987	491 aa	Predicted RBP	15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	KRT32	Q14532	448 aa		15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	TTLL4	Q14679	1199 aa		15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	FSCN1	Q16658	493 aa	Known RBP	15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	CREB3L3	Q68CJ9	461 aa		15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	CCSAP	Q6IQ19	270 aa	Predicted RBP	15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	SYNE3	Q6ZMZ3	975 aa		15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	ANKRD33	Q7Z3H0	272 aa		15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	STAG2	Q8N3U4	1231 aa		15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	IGDCC4	Q8TDY8	1250 aa		15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	CPVL	Q9H3G5	476 aa		15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	RIOX1	Q9H6W3	641 aa		15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	GPHN	Q9NQX3	736 aa	Predicted RBP	15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	POLR3E	Q9NVU0	708 aa		15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	PCDHA1	Q9Y5I3	950 aa		15.91	■□□□□ 0.14
TAF1C-223	ENST00000570270	PNMA6F	A0A0J9YX94	578 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	RBM47	A0AV96	593 aa	Known RBP	15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	ARVCF	O00192	962 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	PRC1	O43663	620 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	KPNA6	O60684	536 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	PQBP1	O60828	265 aa	Known RBP	15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	RAG1	P15918	1043 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	SMPD1	P17405	629 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	EDNRB	P24530	442 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	LIFR	P42702	1097 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	TROAP	Q12815	778 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	PPP2R5B	Q15173	497 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	NECTIN1	Q15223	517 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	STXBP2	Q15833	593 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	ARHGEF16	Q5VV41	709 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	GPR153	Q6NV75	609 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	STOX1	Q6ZVD7	989 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	MTMR8	Q96EF0	704 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	RMDN3	Q96TC7	470 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	TMEM39A	Q9NV64	488 aa		15.9	■□□□□ 0.14
TAF1C-223	ENST00000570270	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	15.89	■□□□□ 0.13
TAF1C-223	ENST00000570270	CFB	P00751	764 aa		15.89	■□□□□ 0.13
TAF1C-223	ENST00000570270	LRIT3	Q3SXY7	679 aa		15.89	■□□□□ 0.13
TAF1C-223	ENST00000570270	CHST3	Q7LGC8	479 aa		15.89	■□□□□ 0.13
TAF1C-223	ENST00000570270	SYTL5	Q8TDW5	730 aa	Predicted RBP	15.89	■□□□□ 0.13
TAF1C-223	ENST00000570270	PDLIM7	Q9NR12	457 aa		15.89	■□□□□ 0.13
TAF1C-223	ENST00000570270	PDGFC	Q9NRA1	345 aa		15.89	■□□□□ 0.13
TAF1C-223	ENST00000570270	SEC63	Q9UGP8	760 aa	Known RBP	15.89	■□□□□ 0.13
TAF1C-223	ENST00000570270	ASTN1	O14525	1302 aa		15.89	■□□□□ 0.13
TAF1C-223	ENST00000570270	KIAA0355	O15063	1070 aa		15.88	■□□□□ 0.13
TAF1C-223	ENST00000570270	HMGB1	P09429	215 aa	Known RBP	15.88	■□□□□ 0.13
TAF1C-223	ENST00000570270	KCNV1	Q6PIU1	500 aa		15.88	■□□□□ 0.13
TAF1C-223	ENST00000570270	HOMER1	Q86YM7	354 aa		15.88	■□□□□ 0.13

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms