RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 LDHDQ86WU2 507 aa12.4□□□□□ -0.42
PDXDC1-216ENST00000569715 GJA10Q969M2 543 aa12.4□□□□□ -0.42
PDXDC1-216ENST00000569715 TAF1DQ9H5J8 278 aaPredicted RBP12.4□□□□□ -0.42
PDXDC1-216ENST00000569715 AS3MTQ9HBK9 375 aa12.4□□□□□ -0.42
PDXDC1-216ENST00000569715 MDM2Q00987 491 aaPredicted RBP12.4□□□□□ -0.42
PDXDC1-216ENST00000569715 CDCA5Q96FF9 252 aa12.4□□□□□ -0.42
PDXDC1-216ENST00000569715 UIMC1Q96RL1 719 aa12.4□□□□□ -0.42
PDXDC1-216ENST00000569715 GLT8D2Q9H1C3 349 aa12.4□□□□□ -0.42
PDXDC1-216ENST00000569715 POTEIP0CG38 1075 aa12.4□□□□□ -0.43
PDXDC1-216ENST00000569715 POTEJP0CG39 1038 aa12.4□□□□□ -0.43
PDXDC1-216ENST00000569715 LONP1P36776 959 aaKnown RBP12.4□□□□□ -0.43
PDXDC1-216ENST00000569715 PRPHP41219 470 aa12.4□□□□□ -0.43
PDXDC1-216ENST00000569715 USP14P54578 494 aa12.4□□□□□ -0.43
PDXDC1-216ENST00000569715 PRPF38AQ8NAV1 312 aaKnown RBP12.4□□□□□ -0.43
PDXDC1-216ENST00000569715 MTMR9Q96QG7 549 aa12.4□□□□□ -0.43
PDXDC1-216ENST00000569715 ZC3H4Q9UPT8 1303 aaKnown RBP12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 LAD1O00515 517 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 STX1AQ16623 288 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 ISM2Q6H9L7 571 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 LUZP1Q86V48 1076 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 CBX8Q9HC52 389 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 CFBP00751 764 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 AP3B2Q13367 1082 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 KARSQ15046 597 aaKnown RBP12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 E2F4Q16254 413 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 CALCRLQ16602 461 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 DPCR1Q3MIW9 517 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 FAM200AQ8TCP9 573 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 CRYGNQ8WXF5 182 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 PPP1R9AQ9ULJ8 1098 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 AFG3L2Q9Y4W6 797 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 CASP1P29466 404 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 MAP3K9P80192 1104 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 FCHSD1Q86WN1 690 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 CPXCR1Q8N123 301 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 DDX25Q9UHL0 483 aaKnown RBP12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 CCPG1Q9ULG6 757 aa12.39□□□□□ -0.43
PDXDC1-216ENST00000569715 ICAM1P05362 532 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 TECP42680 631 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 TXKP42681 527 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 ARHGAP4P98171 946 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 LRRC15Q8TF66 581 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 ATG4CQ96DT6 458 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 CLMNQ96JQ2 1002 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 SLC38A10Q9HBR0 1119 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 RAVER2Q9HCJ3 691 aaKnown RBP12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 TUBE1Q9UJT0 475 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 POSTNQ15063 836 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 PPP4R3AQ6IN85 833 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 STAMQ92783 540 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 PCDHA5Q9Y5H7 936 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 RBBP6Q7Z6E9 1792 aaKnown RBP12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 SPDYE3A6NKU9 549 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 PIK3CDO00329 1044 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 AFMP43652 599 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 ORC2Q13416 577 aaPredicted RBP12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 ZC3H15Q8WU90 426 aaKnown RBP12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 HAS1Q92839 578 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 C12orf42Q96LP6 360 aa12.38□□□□□ -0.43
PDXDC1-216ENST00000569715 NFIBO00712 420 aa12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 PPP1R12BO60237 982 aaPredicted RBP12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 SLFN14P0C7P3 912 aa12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 ZNF165P49910 485 aa12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 PLIN2Q99541 437 aa12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 HOMER2Q9NSB8 354 aa12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 ABCB11O95342 1321 aa12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 SREBF1P36956 1147 aa12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 FMR1Q06787 632 aaKnown RBP eCLIP12.37□□□□□ -0.435e-6■□□□□ 10.1
PDXDC1-216ENST00000569715 PDXDC2PQ6P474 469 aa12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 ELP3Q9H9T3 547 aa12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 USP25Q9UHP3 1055 aa12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 MRPL11Q9Y3B7 192 aaKnown RBP12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 POTEMA6NI47 508 aa12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 AP5Z1O43299 807 aa12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 UBXN2AP68543 259 aa12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 ZRSR1Q15695 479 aaKnown RBP12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 PAGE5Q96GU1 130 aa12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 MTRQ99707 1265 aa12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 ANO10Q9NW15 660 aa12.37□□□□□ -0.43
PDXDC1-216ENST00000569715 GCOM1H8Y6P7 765 aaPredicted RBP12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 VWA5AO00534 786 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 POLR2MP0CAP2 368 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 NAALADL2Q58DX5 795 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 MUM1L1Q5H9M0 696 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 SH3RF1Q7Z6J0 888 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 IGSF22Q8N9C0 903 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 CLEC4DQ8WXI8 215 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 CSADQ9Y600 493 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 IQCA1LA6NCM1 817 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 C19orf81C9J6K1 198 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 FAM86B1E9PN63 330 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 FAM86B2P0C5J1 330 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 ALAS1P13196 640 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 BMP6P22004 513 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 USP11P51784 963 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 ELOA2Q8IYF1 753 aaPredicted RBP12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 CYP2W1Q8TAV3 490 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 MMTAG2Q9BU76 263 aaKnown RBP12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 DISC1Q9NRI5 854 aa12.36□□□□□ -0.43
PDXDC1-216ENST00000569715 FOSP01100 380 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms