RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 EDIL3O43854 480 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 SERPINC1P01008 464 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 KCNA3P22001 575 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 GTF2F1P35269 517 aaKnown RBP eCLIP6.08□□□□□ -1.44
SF3B3-213ENST00000569687 TXLNAP40222 546 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 UBA7P41226 1012 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 MRPL12P52815 198 aaKnown RBP6.08□□□□□ -1.44
SF3B3-213ENST00000569687 TGFB2P61812 414 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 NFIAQ12857 509 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 PICALMQ13492 652 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 INF2Q27J81 1249 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 CERKLQ49MI3 558 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-213ENST00000569687 NAALADL2Q58DX5 795 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 ZNF658Q5TYW1 1059 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-213ENST00000569687 CDKAL1Q5VV42 579 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 FKBP1CQ5VVH2 108 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 RRAGBQ5VZM2 374 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 PPP4R3AQ6IN85 833 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 ARMCX5Q6P1M9 558 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 SH3BP5LQ7L8J4 393 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 FILIP1Q7Z7B0 1213 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 NEK8Q86SG6 692 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 GRAMD1CQ8IYS0 662 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 C17orf53Q8N3J3 647 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-213ENST00000569687 GMCL1P1Q8NEA9 526 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 MYRIPQ8NFW9 859 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 SPIRE2Q8WWL2 714 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 FBXW7Q969H0 707 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 GMLQ99445 158 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 PSMD1Q99460 953 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 MTRQ99707 1265 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 NAP1L4Q99733 375 aaKnown RBP6.08□□□□□ -1.44
SF3B3-213ENST00000569687 C7orf25Q9BPX7 421 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 UBA5Q9GZZ9 404 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 DBNDD1Q9H9R9 158 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 VAT1LQ9HCJ6 419 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 RIC8AQ9NPQ8 531 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 RWDD2AQ9UIY3 292 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 NFE2L3Q9Y4A8 694 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 PAXBP1Q9Y5B6 917 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 NAV1Q8NEY1 1877 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 SLX4Q8IY92 1834 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 COL2A1P02458 1487 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-213ENST00000569687 MYH6P13533 1939 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 CYP3A7-CYP3A51PA0A087WV96 503 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 A0A1B0GTH6 734 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 DDTLA6NHG4 134 aaPredicted RBP6.07□□□□□ -1.44
SF3B3-213ENST00000569687 H7C1D1 291 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 KIF2AO00139 706 aaPredicted RBP6.07□□□□□ -1.44
SF3B3-213ENST00000569687 DYNC1I1O14576 645 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 ZBTB5O15062 677 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 NRDCO43847 1150 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 RPN1P04843 607 aaKnown RBP6.07□□□□□ -1.44
SF3B3-213ENST00000569687 VIL1P09327 827 aaKnown RBP6.07□□□□□ -1.44
SF3B3-213ENST00000569687 OR52Z1P0C646 297 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 DPEP1P16444 411 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 CDK11BP21127 795 aaKnown RBP6.07□□□□□ -1.44
SF3B3-213ENST00000569687 CYP3A7P24462 503 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 AFMP43652 599 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 USP11P51784 963 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 ADCY7P51828 1080 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 ARID5BQ14865 1188 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 COBLL1Q53SF7 1204 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 CNNM4Q6P4Q7 775 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 BTNL9Q6UXG8 535 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 NYAP1Q6ZVC0 841 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 TMEM179Q6ZVK1 233 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 APTXQ7Z2E3 356 aaKnown RBP6.07□□□□□ -1.44
SF3B3-213ENST00000569687 TMC6Q7Z403 805 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 KIAA0825Q8IV33 1275 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 ADGRF4Q8IZF3 695 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 CCAR2Q8N163 923 aaKnown RBP6.07□□□□□ -1.44
SF3B3-213ENST00000569687 REXO1Q8N1G1 1221 aaKnown RBP6.07□□□□□ -1.44
SF3B3-213ENST00000569687 TTLL6Q8N841 843 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 IGSF22Q8N9C0 903 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 TTC13Q8NBP0 860 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 CCDC112Q8NEF3 446 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 RASGRP4Q8TDF6 673 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 DPF2Q92785 391 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 GMCL1Q96IK5 515 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 PRMT6Q96LA8 375 aaPredicted RBP6.07□□□□□ -1.44
SF3B3-213ENST00000569687 MBOAT7Q96N66 472 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 CTAGE1Q96RT6 745 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 CPVLQ9H3G5 476 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 DNAJC18Q9H819 358 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 DISC1Q9NRI5 854 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 INTS13Q9NVM9 706 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 LIMA1Q9UHB6 759 aaKnown RBP6.07□□□□□ -1.44
SF3B3-213ENST00000569687 CDK5RAP2Q96SN8 1893 aa6.07□□□□□ -1.44
SF3B3-213ENST00000569687 FOCADQ5VW36 1801 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 MYH1P12882 1939 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 YDJCA8MPS7 323 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 SPTLC1O15269 473 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 CCP110O43303 1012 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 C21orf2O43822 256 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 KLRC4O43908 158 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 CCNT1O60563 726 aaKnown RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 PLA2G6O60733 806 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 PPP1R11O60927 126 aaPredicted RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 RHOBTB3O94955 611 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms