RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 EHBP1Q8NDI1 1231 aa22.68■■□□□ 1.22
SCRT1-201ENST00000569446 KIAA1024Q9UPX6 916 aa22.68■■□□□ 1.22
SCRT1-201ENST00000569446 RNF187Q5TA31 235 aaPredicted RBP22.68■■□□□ 1.22
SCRT1-201ENST00000569446 TRIM14Q14142 442 aa22.68■■□□□ 1.22
SCRT1-201ENST00000569446 LACRTQ9GZZ8 138 aa22.68■■□□□ 1.22
SCRT1-201ENST00000569446 PCDHA6Q9UN73 950 aa22.68■■□□□ 1.22
SCRT1-201ENST00000569446 BCS1LQ9Y276 419 aa22.68■■□□□ 1.22
SCRT1-201ENST00000569446 PCDHA8Q9Y5H6 950 aa22.68■■□□□ 1.22
SCRT1-201ENST00000569446 COL5A2P05997 1499 aaPredicted RBP22.68■■□□□ 1.22
SCRT1-201ENST00000569446 USP17L15C9J2P7 530 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 USP17L13C9JLJ4 530 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 USP17L11C9JVI0 530 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 USP17L18D6R9N7 530 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 USP17L22D6RA61 530 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 USP17L17D6RBQ6 530 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 USP17L19D6RCP7 530 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 USP17L20D6RJB6 530 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 USP17L24Q0WX57 530 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 CCDC93Q567U6 631 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 USP17L6PQ6QN14 398 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 CEP89Q96ST8 783 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 PCDHB13Q9Y5F0 798 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 H3BQF6 201 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 SARSP49591 514 aaKnown RBP22.67■■□□□ 1.22
SCRT1-201ENST00000569446 EHHADHQ08426 723 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 ARHGEF1Q92888 912 aaKnown RBP22.67■■□□□ 1.22
SCRT1-201ENST00000569446 CCDC51Q96ER9 411 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 LUC7LQ9NQ29 371 aaKnown RBP22.67■■□□□ 1.22
SCRT1-201ENST00000569446 PCDHA12Q9UN75 941 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 UBAP1LF5GYI3 381 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 NAA35Q5VZE5 725 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 MSL1Q68DK7 614 aa22.67■■□□□ 1.22
SCRT1-201ENST00000569446 GOLGA6BA6NDN3 693 aa22.66■■□□□ 1.22
SCRT1-201ENST00000569446 SFI1A8K8P3 1242 aa22.66■■□□□ 1.22
SCRT1-201ENST00000569446 FGFR1OPO95684 399 aaKnown RBP22.66■■□□□ 1.22
SCRT1-201ENST00000569446 IL17AQ16552 155 aa22.66■■□□□ 1.22
SCRT1-201ENST00000569446 WHAMMP3Q1A5X7 153 aa22.66■■□□□ 1.22
SCRT1-201ENST00000569446 TTBK2Q6IQ55 1244 aa22.66■■□□□ 1.22
SCRT1-201ENST00000569446 C8orf74Q6P047 294 aa22.66■■□□□ 1.22
SCRT1-201ENST00000569446 TAX1BP1Q86VP1 789 aa22.66■■□□□ 1.22
SCRT1-201ENST00000569446 TMEM139Q8IV31 216 aa22.66■■□□□ 1.22
SCRT1-201ENST00000569446 USP40Q9NVE5 1235 aa22.66■■□□□ 1.22
SCRT1-201ENST00000569446 PRR16Q569H4 304 aa22.66■■□□□ 1.22
SCRT1-201ENST00000569446 CT47A1Q5JQC4 288 aaPredicted RBP22.66■■□□□ 1.22
SCRT1-201ENST00000569446 NFRKBQ6P4R8 1299 aa22.66■■□□□ 1.22
SCRT1-201ENST00000569446 FNBP4Q8N3X1 1017 aaPredicted RBP22.66■■□□□ 1.22
SCRT1-201ENST00000569446 LSM14BQ9BX40 385 aaKnown RBP22.66■■□□□ 1.22
SCRT1-201ENST00000569446 TMEM110-MUSTN1A8MSY1 372 aa22.66■■□□□ 1.22
SCRT1-201ENST00000569446 TRIM66O15016 1216 aa22.66■■□□□ 1.22
SCRT1-201ENST00000569446 RNF40O75150 1001 aa22.66■■□□□ 1.22
SCRT1-201ENST00000569446 PABPC4Q13310 644 aaKnown RBP eCLIP22.66■■□□□ 1.22
SCRT1-201ENST00000569446 AFAP1L1Q8TED9 768 aa22.66■■□□□ 1.22
SCRT1-201ENST00000569446 SHISA4Q96DD7 197 aa22.66■■□□□ 1.22
SCRT1-201ENST00000569446 PPP1R1BQ9UD71 204 aaPredicted RBP22.66■■□□□ 1.22
SCRT1-201ENST00000569446 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.66■■□□□ 1.22
SCRT1-201ENST00000569446 DDX39AO00148 427 aaKnown RBP22.65■■□□□ 1.22
SCRT1-201ENST00000569446 SLC1A4P43007 532 aa22.65■■□□□ 1.22
SCRT1-201ENST00000569446 LGALS16A8MUM7 142 aa22.65■■□□□ 1.22
SCRT1-201ENST00000569446 GFPT1Q06210 699 aaPredicted RBP22.65■■□□□ 1.22
SCRT1-201ENST00000569446 LARP4BQ92615 738 aaKnown RBP22.65■■□□□ 1.22
SCRT1-201ENST00000569446 GOLGA6L10A6NI86 522 aa22.65■■□□□ 1.22
SCRT1-201ENST00000569446 APBA1Q02410 837 aa22.65■■□□□ 1.22
SCRT1-201ENST00000569446 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.64■■□□□ 1.22
SCRT1-201ENST00000569446 GOLGA6CA6NDK9 693 aa22.64■■□□□ 1.22
SCRT1-201ENST00000569446 GOLGA6DP0CG33 693 aa22.64■■□□□ 1.22
SCRT1-201ENST00000569446 MICALL1Q8N3F8 863 aa22.64■■□□□ 1.22
SCRT1-201ENST00000569446 MTRQ99707 1265 aa22.64■■□□□ 1.22
SCRT1-201ENST00000569446 GOLPH3Q9H4A6 298 aa22.64■■□□□ 1.22
SCRT1-201ENST00000569446 GOLGA6AQ9NYA3 693 aa22.64■■□□□ 1.22
SCRT1-201ENST00000569446 SAMM50Q9Y512 469 aa22.64■■□□□ 1.22
SCRT1-201ENST00000569446 TRAPPC10P48553 1259 aa22.64■■□□□ 1.21
SCRT1-201ENST00000569446 C12orf60Q5U649 245 aa22.64■■□□□ 1.21
SCRT1-201ENST00000569446 ADAMTS1Q9UHI8 967 aa22.64■■□□□ 1.21
SCRT1-201ENST00000569446 NPHP3-ACAD11A0A0J9YXS1 232 aa22.64■■□□□ 1.21
SCRT1-201ENST00000569446 HLA-DOAP06340 250 aa22.64■■□□□ 1.21
SCRT1-201ENST00000569446 GPBP1Q86WP2 473 aa22.64■■□□□ 1.21
SCRT1-201ENST00000569446 FUT8Q9BYC5 575 aa22.64■■□□□ 1.21
SCRT1-201ENST00000569446 IL17RBQ9NRM6 502 aa22.64■■□□□ 1.21
SCRT1-201ENST00000569446 CCNE1P24864 410 aa22.63■■□□□ 1.21
SCRT1-201ENST00000569446 TBX2Q13207 712 aaPredicted RBP22.63■■□□□ 1.21
SCRT1-201ENST00000569446 TICAM2Q86XR7 235 aa22.63■■□□□ 1.21
SCRT1-201ENST00000569446 KLHL30Q0D2K2 578 aa22.63■■□□□ 1.21
SCRT1-201ENST00000569446 NDST4Q9H3R1 872 aa22.63■■□□□ 1.21
SCRT1-201ENST00000569446 E9PMD0 336 aa22.63■■□□□ 1.21
SCRT1-201ENST00000569446 ABCB4P21439 1286 aa22.63■■□□□ 1.21
SCRT1-201ENST00000569446 STAT3P40763 770 aa22.63■■□□□ 1.21
SCRT1-201ENST00000569446 SLC30A10Q6XR72 485 aa22.63■■□□□ 1.21
SCRT1-201ENST00000569446 ADSSL1Q8N142 457 aa22.63■■□□□ 1.21
SCRT1-201ENST00000569446 DDX12PQ92771 950 aa22.63■■□□□ 1.21
SCRT1-201ENST00000569446 PSTPIP2Q9H939 334 aa22.63■■□□□ 1.21
SCRT1-201ENST00000569446 HSF2BPO75031 334 aa22.62■■□□□ 1.21
SCRT1-201ENST00000569446 TAL1P17542 331 aaPredicted RBP22.62■■□□□ 1.21
SCRT1-201ENST00000569446 KIAA0753Q2KHM9 967 aa22.62■■□□□ 1.21
SCRT1-201ENST00000569446 KIFC2Q96AC6 838 aa22.62■■□□□ 1.21
SCRT1-201ENST00000569446 DDX25Q9UHL0 483 aaKnown RBP22.62■■□□□ 1.21
SCRT1-201ENST00000569446 MED1Q15648 1581 aaPredicted RBP22.62■■□□□ 1.21
SCRT1-201ENST00000569446 CLIC2O15247 247 aa22.62■■□□□ 1.21
SCRT1-201ENST00000569446 CEP104O60308 925 aa22.62■■□□□ 1.21
SCRT1-201ENST00000569446 FAM76AQ8TAV0 307 aa22.62■■□□□ 1.21
SCRT1-201ENST00000569446 MS4A14Q96JA4 679 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 254 ms