RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 TMEM192Q8IY95 271 aa8.15□□□□□ -1.1
HERPUD1-217ENST00000569429 RPGRIP1Q96KN7 1286 aa8.15□□□□□ -1.1
HERPUD1-217ENST00000569429 FGD4Q96M96 766 aa8.15□□□□□ -1.1
HERPUD1-217ENST00000569429 HINFPQ9BQA5 517 aa8.15□□□□□ -1.1
HERPUD1-217ENST00000569429 AP5M1Q9H0R1 490 aa8.15□□□□□ -1.1
HERPUD1-217ENST00000569429 EHD4Q9H223 541 aa8.15□□□□□ -1.1
HERPUD1-217ENST00000569429 CLEC1BQ9P126 229 aa8.15□□□□□ -1.1
HERPUD1-217ENST00000569429 FBXO3Q9UK99 471 aa8.15□□□□□ -1.1
HERPUD1-217ENST00000569429 LOC400499M0QZD8 3231 aa8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 LINC01565O15544 149 aa8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 DYNC1LI2O43237 492 aaPredicted RBP8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 GTF2F1P35269 517 aaKnown RBP eCLIP8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 MCAMP43121 646 aa8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 RFX5P48382 616 aaPredicted RBP8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 NDUFV1P49821 464 aa8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 COL9A3Q14050 684 aaPredicted RBP8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 IKBKEQ14164 716 aa8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 FAM117BQ6P1L5 589 aa8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 NFRKBQ6P4R8 1299 aa8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 NOL8Q76FK4 1167 aaKnown RBP8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 CCDC105Q8IYK2 499 aa8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 DCLK2Q8N568 766 aa8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 REPS2Q8NFH8 660 aa8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 CAGE1Q8TC20 777 aa8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 AFAP1L1Q8TED9 768 aa8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 NOL10Q9BSC4 688 aaKnown RBP8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 RTKNQ9BST9 563 aa8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 AATFQ9NY61 560 aaKnown RBP eCLIP8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 CEP126Q9P2H0 1117 aa8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 SERPINB13Q9UIV8 391 aa8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 USP15Q9Y4E8 981 aaPredicted RBP8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 USP9XQ93008 2570 aaPredicted RBP8.14□□□□□ -1.11
HERPUD1-217ENST00000569429 PRR5-ARHGAP8B1AHC4 643 aa8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 C5orf67F2Z3F1 127 aa8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 VWA5AO00534 786 aa8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 WDR46O15213 610 aaKnown RBP8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 RB1P06400 928 aa8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 ADORA1P30542 326 aa8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 ARHGAP8P85298 464 aa8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 PTPN11Q06124 597 aaPredicted RBP8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 SEPT2Q15019 361 aa8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 TCTN1Q2MV58 587 aa8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 ZBTB33Q86T24 672 aa8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 CCDC144CPQ8IYA2 1237 aa8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 GPR161Q8N6U8 529 aaKnown RBP8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 SRCIN1Q9C0H9 1055 aa8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 IGFLR1Q9H665 355 aa8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 INCENPQ9NQS7 918 aa8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 POLR3EQ9NVU0 708 aa8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 SAP30BPQ9UHR5 308 aaKnown RBP8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 WDFY3Q8IZQ1 3526 aa8.13□□□□□ -1.11
HERPUD1-217ENST00000569429 MYH7BA7E2Y1 1941 aa8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 NBNO60934 754 aa8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 CIAO1O76071 339 aa8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 SELPP16109 830 aa8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 SMPD1P17405 629 aa8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 PURAQ00577 322 aaKnown RBP8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 MTMR3Q13615 1198 aa8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 CWF19L1Q69YN2 538 aaKnown RBP8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 IQSEC1Q6DN90 963 aa8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 CCDC155Q8N6L0 562 aa8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 KREMEN2Q8NCW0 462 aa8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 SUSD6Q92537 303 aa8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 TSR2Q969E8 191 aaKnown RBP8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 RAI14Q9P0K7 980 aa8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 PPP1R9AQ9ULJ8 1098 aa8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 SORCS3Q9UPU3 1222 aa8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 DMXL2Q8TDJ6 3036 aa8.12□□□□□ -1.11
HERPUD1-217ENST00000569429 LAMA5O15230 3695 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 DCDC2BA2VCK2 349 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 GRM6O15303 877 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 BRD1O95696 1058 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 AMHP03971 560 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 AOC1P19801 751 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 PTGS1P23219 599 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 SHMT1P34896 483 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 RBL2Q08999 1139 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 FAM47CQ5HY64 1035 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 ZC3H14Q6PJT7 736 aaKnown RBP8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 TBC1D9Q6ZT07 1266 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 LRRC8DQ7L1W4 858 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 CRIPAKQ8N1N5 446 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 EFHBQ8N7U6 833 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 DTWD2Q8NBA8 298 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 PPP2R3CQ969Q6 453 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 MTG1Q9BT17 334 aaPredicted RBP8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 C11orf84Q9BUA3 381 aaPredicted RBP8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 TEX13BQ9BXU2 312 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 MFSD1Q9H3U5 465 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 VCPKMTQ9H867 229 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 HMG20BQ9P0W2 317 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 CDV3Q9UKY7 258 aaKnown RBP8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 ADAMTS8Q9UP79 889 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 TMX2Q9Y320 296 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 RIPK3Q9Y572 518 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 R4GN57 208 aa8.11□□□□□ -1.11
HERPUD1-217ENST00000569429 TTC3P53804 2025 aa8.1□□□□□ -1.11
HERPUD1-217ENST00000569429 ASXL3Q9C0F0 2248 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms