RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 MOV10L1Q9BXT6 1211 aaKnown RBP18.47■□□□□ 0.55
USB1-215ENST00000569252 PAK6Q9NQU5 681 aaPredicted RBP18.47■□□□□ 0.55
USB1-215ENST00000569252 HOMER2Q9NSB8 354 aa18.47■□□□□ 0.55
USB1-215ENST00000569252 ZNF214Q9UL59 606 aaPredicted RBP18.47■□□□□ 0.55
USB1-215ENST00000569252 SMC3Q9UQE7 1217 aa18.47■□□□□ 0.55
USB1-215ENST00000569252 NR2E3Q9Y5X4 410 aa18.47■□□□□ 0.55
USB1-215ENST00000569252 CNTNAP5Q8WYK1 1306 aa18.47■□□□□ 0.55
USB1-215ENST00000569252 PLXNB2O15031 1838 aa18.46■□□□□ 0.55
USB1-215ENST00000569252 PPFIA3O75145 1194 aa18.46■□□□□ 0.55
USB1-215ENST00000569252 SCG2P13521 617 aa18.46■□□□□ 0.55
USB1-215ENST00000569252 ERCC3P19447 782 aa18.46■□□□□ 0.55
USB1-215ENST00000569252 FUT2Q10981 343 aa18.46■□□□□ 0.55
USB1-215ENST00000569252 TRIM29Q14134 588 aa18.46■□□□□ 0.55
USB1-215ENST00000569252 PFKFB3Q16875 520 aaPredicted RBP18.46■□□□□ 0.55
USB1-215ENST00000569252 COA7Q96BR5 231 aa18.46■□□□□ 0.55
USB1-215ENST00000569252 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.46■□□□□ 0.55
USB1-215ENST00000569252 ACAD9Q9H845 621 aa18.46■□□□□ 0.55
USB1-215ENST00000569252 CUL9Q8IWT3 2517 aa18.45■□□□□ 0.54
USB1-215ENST00000569252 PTPDC1A2A3K4 754 aa18.45■□□□□ 0.54
USB1-215ENST00000569252 STRNO43815 780 aa18.45■□□□□ 0.54
USB1-215ENST00000569252 NAPAP54920 295 aa18.45■□□□□ 0.54
USB1-215ENST00000569252 Q7L0L9 218 aa18.45■□□□□ 0.54
USB1-215ENST00000569252 ANKRD35Q8N283 1001 aa18.45■□□□□ 0.54
USB1-215ENST00000569252 SLC17A8Q8NDX2 589 aa18.45■□□□□ 0.54
USB1-215ENST00000569252 NSUN7Q8NE18 718 aaKnown RBP18.45■□□□□ 0.54
USB1-215ENST00000569252 CUL5Q93034 780 aa18.45■□□□□ 0.54
USB1-215ENST00000569252 GLT8D2Q9H1C3 349 aa18.45■□□□□ 0.54
USB1-215ENST00000569252 RNF146Q9NTX7 359 aa18.45■□□□□ 0.54
USB1-215ENST00000569252 ZNF536O15090 1300 aa18.45■□□□□ 0.54
USB1-215ENST00000569252 STK36Q9NRP7 1315 aa18.45■□□□□ 0.54
USB1-215ENST00000569252 DLL1O00548 723 aa18.44■□□□□ 0.54
USB1-215ENST00000569252 FCER1AP12319 257 aa18.44■□□□□ 0.54
USB1-215ENST00000569252 MNX1P50219 401 aaPredicted RBP18.44■□□□□ 0.54
USB1-215ENST00000569252 IRF5Q13568 498 aa18.44■□□□□ 0.54
USB1-215ENST00000569252 KCTD2Q14681 263 aa18.44■□□□□ 0.54
USB1-215ENST00000569252 PLEKHH3Q7Z736 793 aa18.44■□□□□ 0.54
USB1-215ENST00000569252 CCDC148Q8NFR7 591 aa18.44■□□□□ 0.54
USB1-215ENST00000569252 MMP19Q99542 508 aa18.44■□□□□ 0.54
USB1-215ENST00000569252 CRISPLD2Q9H0B8 497 aa18.44■□□□□ 0.54
USB1-215ENST00000569252 SLC5A4Q9NY91 659 aa18.44■□□□□ 0.54
USB1-215ENST00000569252 CTDNEP1O95476 244 aa18.43■□□□□ 0.54
USB1-215ENST00000569252 MRPL12P52815 198 aaKnown RBP18.43■□□□□ 0.54
USB1-215ENST00000569252 CUL4AQ13619 759 aa18.43■□□□□ 0.54
USB1-215ENST00000569252 SLC35G1Q2M3R5 365 aa18.43■□□□□ 0.54
USB1-215ENST00000569252 POTEEQ6S8J3 1075 aa18.43■□□□□ 0.54
USB1-215ENST00000569252 INTS4Q96HW7 963 aaKnown RBP18.43■□□□□ 0.54
USB1-215ENST00000569252 ALG1Q9BT22 464 aa18.43■□□□□ 0.54
USB1-215ENST00000569252 MAF1Q9H063 256 aa18.43■□□□□ 0.54
USB1-215ENST00000569252 C6orf50Q9HD87 102 aa18.43■□□□□ 0.54
USB1-215ENST00000569252 SH3GLB2Q9NR46 395 aa18.43■□□□□ 0.54
USB1-215ENST00000569252 BARHL2Q9NY43 387 aa18.43■□□□□ 0.54
USB1-215ENST00000569252 RIPK3Q9Y572 518 aa18.43■□□□□ 0.54
USB1-215ENST00000569252 JAK2O60674 1132 aa18.42■□□□□ 0.54
USB1-215ENST00000569252 GNA11P29992 359 aa18.42■□□□□ 0.54
USB1-215ENST00000569252 NLRP5P59047 1200 aa18.42■□□□□ 0.54
USB1-215ENST00000569252 PPP1R18Q6NYC8 613 aa18.42■□□□□ 0.54
USB1-215ENST00000569252 NSMFQ6X4W1 530 aa18.42■□□□□ 0.54
USB1-215ENST00000569252 SAMD3Q8N6K7 520 aa18.42■□□□□ 0.54
USB1-215ENST00000569252 RGS22Q8NE09 1264 aa18.42■□□□□ 0.54
USB1-215ENST00000569252 SMARCC2Q8TAQ2 1214 aa18.42■□□□□ 0.54
USB1-215ENST00000569252 BICD2Q8TD16 824 aa18.42■□□□□ 0.54
USB1-215ENST00000569252 PXYLP1Q8TE99 480 aa18.42■□□□□ 0.54
USB1-215ENST00000569252 TRIB2Q92519 343 aa18.42■□□□□ 0.54
USB1-215ENST00000569252 GPKOWQ92917 476 aaPredicted RBP eCLIP18.42■□□□□ 0.54
USB1-215ENST00000569252 PORCNQ9H237 461 aa18.42■□□□□ 0.54
USB1-215ENST00000569252 PSTPIP2Q9H939 334 aa18.42■□□□□ 0.54
USB1-215ENST00000569252 SMCO2A6NFE2 343 aa18.41■□□□□ 0.54
USB1-215ENST00000569252 GCOM1H8Y6P7 765 aaPredicted RBP18.41■□□□□ 0.54
USB1-215ENST00000569252 CFBP00751 764 aa18.41■□□□□ 0.54
USB1-215ENST00000569252 POLR2MP0CAP2 368 aa18.41■□□□□ 0.54
USB1-215ENST00000569252 CYP2B6P20813 491 aa18.41■□□□□ 0.54
USB1-215ENST00000569252 GJB2P29033 226 aa18.41■□□□□ 0.54
USB1-215ENST00000569252 PKN1Q16512 942 aa18.41■□□□□ 0.54
USB1-215ENST00000569252 WWC2Q6AWC2 1192 aa18.41■□□□□ 0.54
USB1-215ENST00000569252 RNF207Q6ZRF8 634 aa18.41■□□□□ 0.54
USB1-215ENST00000569252 GPR142Q7Z601 462 aa18.41■□□□□ 0.54
USB1-215ENST00000569252 DPP9Q86TI2 863 aa18.41■□□□□ 0.54
USB1-215ENST00000569252 FAM177A1Q8N128 213 aaPredicted RBP18.41■□□□□ 0.54
USB1-215ENST00000569252 BRMS1Q9HCU9 246 aa18.41■□□□□ 0.54
USB1-215ENST00000569252 MAP3K20Q9NYL2 800 aaKnown RBP18.41■□□□□ 0.54
USB1-215ENST00000569252 GJD2Q9UKL4 321 aa18.41■□□□□ 0.54
USB1-215ENST00000569252 PFASO15067 1338 aa18.41■□□□□ 0.54
USB1-215ENST00000569252 SLC15A5A6NIM6 579 aa18.4■□□□□ 0.54
USB1-215ENST00000569252 STXBP3O00186 592 aa18.4■□□□□ 0.54
USB1-215ENST00000569252 PPP1R11O60927 126 aaPredicted RBP18.4■□□□□ 0.54
USB1-215ENST00000569252 PTPREP23469 700 aa18.4■□□□□ 0.54
USB1-215ENST00000569252 CALML3P27482 149 aa18.4■□□□□ 0.54
USB1-215ENST00000569252 SAFBQ15424 915 aaKnown RBP eCLIP18.4■□□□□ 0.54
USB1-215ENST00000569252 ABRAQ8N0Z2 381 aa18.4■□□□□ 0.54
USB1-215ENST00000569252 C8orf76Q96K31 380 aa18.4■□□□□ 0.54
USB1-215ENST00000569252 MPHOSPH6Q99547 160 aaKnown RBP18.4■□□□□ 0.54
USB1-215ENST00000569252 NUDT12Q9BQG2 462 aa18.4■□□□□ 0.54
USB1-215ENST00000569252 FOXD4L1Q9NU39 408 aa18.4■□□□□ 0.54
USB1-215ENST00000569252 VPS54Q9P1Q0 977 aa18.4■□□□□ 0.54
USB1-215ENST00000569252 RLFQ13129 1914 aa18.39■□□□□ 0.53
USB1-215ENST00000569252 B4DLN1 442 aa18.39■□□□□ 0.53
USB1-215ENST00000569252 H3BQV1 296 aa18.39■□□□□ 0.53
USB1-215ENST00000569252 PDCP20941 246 aa18.39■□□□□ 0.53
USB1-215ENST00000569252 ADCY7P51828 1080 aa18.39■□□□□ 0.53
USB1-215ENST00000569252 ST3GAL1Q11201 340 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms