RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 USP17L19D6RCP7 530 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 USP17L20D6RJB6 530 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 H3BM21 787 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 MECOMQ03112 1051 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 EXOSC9Q06265 439 aaKnown RBP7.26□□□□□ -1.25
CDH13-212ENST00000569144 USP17L24Q0WX57 530 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 NFX1Q12986 1120 aaKnown RBP7.26□□□□□ -1.25
CDH13-212ENST00000569144 PTK7Q13308 1070 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 RASGRF1Q13972 1273 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 CCDC85BQ15834 202 aaPredicted RBP7.26□□□□□ -1.25
CDH13-212ENST00000569144 AAK1Q2M2I8 961 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 ANO1Q5XXA6 986 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 LBX2Q6XYB7 198 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 CCDC129Q6ZRS4 1044 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 ALYREFQ86V81 257 aaKnown RBP7.26□□□□□ -1.25
CDH13-212ENST00000569144 NPAS3Q8IXF0 933 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 SNX27Q96L92 541 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 C12orf42Q96LP6 360 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 EPHX3Q9H6B9 360 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 PI4KBQ9UBF8 816 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 PHF24Q9UPV7 400 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 MYH2Q9UKX2 1941 aa7.26□□□□□ -1.25
CDH13-212ENST00000569144 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.25□□□□□ -1.25
CDH13-212ENST00000569144 PQBP1O60828 265 aaKnown RBP7.25□□□□□ -1.25
CDH13-212ENST00000569144 WFS1O76024 890 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 CIAO1O76071 339 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 DKK1O94907 266 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 LDHCP07864 332 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 IGFBP4P22692 258 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 GSTO1P78417 241 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 JAG1P78504 1218 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 RAB30Q15771 203 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 C4orf17Q53FE4 359 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 FAM47AQ5JRC9 791 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 RASIP1Q5U651 963 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 CCDC174Q6PII3 467 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 TREML4Q6UXN2 200 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 ANKRD33Q7Z3H0 272 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 DPP9Q86TI2 863 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 METTL16Q86W50 562 aaKnown RBP7.25□□□□□ -1.25
CDH13-212ENST00000569144 SLC44A5Q8NCS7 719 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 RHBDD1Q8TEB9 315 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 ZNF384Q8TF68 577 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 TOX2Q96NM4 488 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.25□□□□□ -1.25
CDH13-212ENST00000569144 DHX36Q9H2U1 1008 aaKnown RBP7.25□□□□□ -1.25
CDH13-212ENST00000569144 DNAJC18Q9H819 358 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 TIMMDC1Q9NPL8 285 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 TMEM39AQ9NV64 488 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 ZBTB21Q9ULJ3 1066 aa7.25□□□□□ -1.25
CDH13-212ENST00000569144 XIRP2A4UGR9 3374 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 A0A1W2PQ45 241 aaPredicted RBP7.24□□□□□ -1.25
CDH13-212ENST00000569144 A0A1W2PQY0 241 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 GRXCR1A8MXD5 290 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 CDK2AP1O14519 115 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 STRNO43815 780 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 GDF11O95390 407 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 TIMP1P01033 207 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 ADORA2AP29274 412 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 FAAP100Q0VG06 881 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 DPYDQ12882 1025 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 PPIGQ13427 754 aaKnown RBP eCLIP7.24□□□□□ -1.25
CDH13-212ENST00000569144 WDR44Q5JSH3 913 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 TMEM240Q5SV17 173 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 MFSD5Q6N075 450 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 CATSPERGQ6ZRH7 1159 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 RNF180Q86T96 592 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 TEX11Q8IYF3 940 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 PRKRIP1Q9H875 184 aaPredicted RBP7.24□□□□□ -1.25
CDH13-212ENST00000569144 XPNPEP3Q9NQH7 507 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 SLC5A4Q9NY91 659 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 BTBD7Q9P203 1132 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 MSRAQ9UJ68 235 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 USP3Q9Y6I4 520 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 ZNF236Q9UL36 1845 aa7.24□□□□□ -1.25
CDH13-212ENST00000569144 DCDC2CA8MYV0 355 aa7.23□□□□□ -1.25
CDH13-212ENST00000569144 ERC2O15083 957 aa7.23□□□□□ -1.25
CDH13-212ENST00000569144 RARBP10826 455 aa7.23□□□□□ -1.25
CDH13-212ENST00000569144 ADORA1P30542 326 aa7.23□□□□□ -1.25
CDH13-212ENST00000569144 IL15P40933 162 aaPredicted RBP7.23□□□□□ -1.25
CDH13-212ENST00000569144 PLA2G4AP47712 749 aa7.23□□□□□ -1.25
CDH13-212ENST00000569144 KCNQ1P51787 676 aa7.23□□□□□ -1.25
CDH13-212ENST00000569144 USP14P54578 494 aa7.23□□□□□ -1.25
CDH13-212ENST00000569144 EPHA4P54764 986 aa7.23□□□□□ -1.25
CDH13-212ENST00000569144 SEC13P55735 322 aa7.23□□□□□ -1.25
CDH13-212ENST00000569144 TFF2Q03403 129 aa7.23□□□□□ -1.25
CDH13-212ENST00000569144 DDX10Q13206 875 aaKnown RBP7.23□□□□□ -1.25
CDH13-212ENST00000569144 SHROOM1Q2M3G4 852 aaPredicted RBP7.23□□□□□ -1.25
CDH13-212ENST00000569144 PSRC1Q6PGN9 363 aaPredicted RBP7.23□□□□□ -1.25
CDH13-212ENST00000569144 C16orf59Q7L2K0 433 aa7.23□□□□□ -1.25
CDH13-212ENST00000569144 ANKMY2Q8IV38 441 aa7.23□□□□□ -1.25
CDH13-212ENST00000569144 FOXP4Q8IVH2 680 aaPredicted RBP7.23□□□□□ -1.25
CDH13-212ENST00000569144 WDR63Q8IWG1 891 aa7.23□□□□□ -1.25
CDH13-212ENST00000569144 CRACR2BQ8N4Y2 399 aaPredicted RBP7.23□□□□□ -1.25
CDH13-212ENST00000569144 TSEN2Q8NCE0 465 aaKnown RBP7.23□□□□□ -1.25
CDH13-212ENST00000569144 NSUN4Q96CB9 384 aaKnown RBP7.23□□□□□ -1.25
CDH13-212ENST00000569144 NIFKQ9BYG3 293 aaKnown RBP7.23□□□□□ -1.25
CDH13-212ENST00000569144 USP44Q9H0E7 712 aa7.23□□□□□ -1.25
CDH13-212ENST00000569144 SIL1Q9H173 461 aa7.23□□□□□ -1.25
CDH13-212ENST00000569144 SLC28A3Q9HAS3 691 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms