RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 TROAPQ12815 778 aa29.45■■■□□ 2.31
CCNF-205ENST00000569093 RGS22Q8NE09 1264 aa29.45■■■□□ 2.31
CCNF-205ENST00000569093 GNEQ9Y223 722 aaKnown RBP29.45■■■□□ 2.31
CCNF-205ENST00000569093 PRC1O43663 620 aa29.44■■■□□ 2.3
CCNF-205ENST00000569093 CDC45O75419 566 aa29.44■■■□□ 2.3
CCNF-205ENST00000569093 MDM2Q00987 491 aaPredicted RBP29.44■■■□□ 2.3
CCNF-205ENST00000569093 BEX3Q00994 111 aa29.44■■■□□ 2.3
CCNF-205ENST00000569093 GNASQ5JWF2 1037 aa29.44■■■□□ 2.3
CCNF-205ENST00000569093 SPC25Q9HBM1 224 aa29.44■■■□□ 2.3
CCNF-205ENST00000569093 VTA1Q9NP79 307 aa29.44■■■□□ 2.3
CCNF-205ENST00000569093 PPP1R11O60927 126 aaPredicted RBP29.43■■■□□ 2.3
CCNF-205ENST00000569093 CST5P28325 142 aaPredicted RBP29.43■■■□□ 2.3
CCNF-205ENST00000569093 BMP8BP34820 402 aa29.43■■■□□ 2.3
CCNF-205ENST00000569093 TLE2Q04725 743 aa29.43■■■□□ 2.3
CCNF-205ENST00000569093 C1orf53Q5VUE5 145 aa29.43■■■□□ 2.3
CCNF-205ENST00000569093 IQSEC1Q6DN90 963 aa29.43■■■□□ 2.3
CCNF-205ENST00000569093 CATIPQ7Z7H3 387 aa29.43■■■□□ 2.3
CCNF-205ENST00000569093 MTMR8Q96EF0 704 aa29.43■■■□□ 2.3
CCNF-205ENST00000569093 LY9Q9HBG7 655 aa29.43■■■□□ 2.3
CCNF-205ENST00000569093 MOXD2PA6NHM9 499 aa29.42■■■□□ 2.3
CCNF-205ENST00000569093 NEFLP07196 543 aa29.42■■■□□ 2.3
CCNF-205ENST00000569093 ASGR1P07306 291 aa29.42■■■□□ 2.3
CCNF-205ENST00000569093 STARD7Q9NQZ5 370 aa29.42■■■□□ 2.3
CCNF-205ENST00000569093 COL20A1Q9P218 1284 aa29.42■■■□□ 2.3
CCNF-205ENST00000569093 MRPL11Q9Y3B7 192 aaKnown RBP29.42■■■□□ 2.3
CCNF-205ENST00000569093 LOC102724159A0A0B4J2E5 919 aa29.41■■■□□ 2.3
CCNF-205ENST00000569093 ZBTB5O15062 677 aa29.41■■■□□ 2.3
CCNF-205ENST00000569093 DYNC1LI2O43237 492 aaPredicted RBP29.41■■■□□ 2.3
CCNF-205ENST00000569093 MCM5P33992 734 aa29.41■■■□□ 2.3
CCNF-205ENST00000569093 PWP2Q15269 919 aaKnown RBP29.41■■■□□ 2.3
CCNF-205ENST00000569093 CASC1Q6TDU7 716 aa29.41■■■□□ 2.3
CCNF-205ENST00000569093 SH3RF1Q7Z6J0 888 aa29.41■■■□□ 2.3
CCNF-205ENST00000569093 TLK2Q86UE8 772 aa29.41■■■□□ 2.3
CCNF-205ENST00000569093 HOMER1Q86YM7 354 aa29.41■■■□□ 2.3
CCNF-205ENST00000569093 PCSK9Q8NBP7 692 aaKnown RBP29.41■■■□□ 2.3
CCNF-205ENST00000569093 DNERQ8NFT8 737 aa29.41■■■□□ 2.3
CCNF-205ENST00000569093 SYTL5Q8TDW5 730 aaPredicted RBP29.41■■■□□ 2.3
CCNF-205ENST00000569093 NUP133Q8WUM0 1156 aa29.41■■■□□ 2.3
CCNF-205ENST00000569093 TAAR1Q96RJ0 339 aa29.41■■■□□ 2.3
CCNF-205ENST00000569093 PIGSQ96S52 555 aa29.41■■■□□ 2.3
CCNF-205ENST00000569093 MYL10Q9BUA6 226 aa29.41■■■□□ 2.3
CCNF-205ENST00000569093 AMNQ9BXJ7 453 aa29.41■■■□□ 2.3
CCNF-205ENST00000569093 RIOX1Q9H6W3 641 aa29.41■■■□□ 2.3
CCNF-205ENST00000569093 PRDM5Q9NQX1 630 aaPredicted RBP29.41■■■□□ 2.3
CCNF-205ENST00000569093 CYTH3O43739 400 aa29.4■■■□□ 2.3
CCNF-205ENST00000569093 NKX3-2P78367 333 aa29.4■■■□□ 2.3
CCNF-205ENST00000569093 PDE4DQ08499 809 aa29.4■■■□□ 2.3
CCNF-205ENST00000569093 UBE2OQ9C0C9 1292 aaKnown RBP29.4■■■□□ 2.3
CCNF-205ENST00000569093 PRKAG2Q9UGJ0 569 aa29.4■■■□□ 2.3
CCNF-205ENST00000569093 SH2B2O14492 632 aaPredicted RBP29.39■■■□□ 2.3
CCNF-205ENST00000569093 EDNRBP24530 442 aa29.39■■■□□ 2.3
CCNF-205ENST00000569093 MCF2L2Q86YR7 1114 aa29.39■■■□□ 2.3
CCNF-205ENST00000569093 ZNF654Q8IZM8 581 aa29.39■■■□□ 2.3
CCNF-205ENST00000569093 AP5M1Q9H0R1 490 aa29.39■■■□□ 2.3
CCNF-205ENST00000569093 PDLIM7Q9NR12 457 aa29.39■■■□□ 2.3
CCNF-205ENST00000569093 A0A1W2PPC1 479 aa29.38■■■□□ 2.29
CCNF-205ENST00000569093 OPLAHO14841 1288 aa29.38■■■□□ 2.29
CCNF-205ENST00000569093 PQBP1O60828 265 aaKnown RBP29.38■■■□□ 2.29
CCNF-205ENST00000569093 VTI1AQ96AJ9 217 aa29.38■■■□□ 2.29
CCNF-205ENST00000569093 GLT1D1Q96MS3 346 aa29.38■■■□□ 2.29
CCNF-205ENST00000569093 LRRC2Q9BYS8 371 aa29.38■■■□□ 2.29
CCNF-205ENST00000569093 WDR11Q9BZH6 1224 aa29.38■■■□□ 2.29
CCNF-205ENST00000569093 PCDHA1Q9Y5I3 950 aa29.38■■■□□ 2.29
CCNF-205ENST00000569093 RBM47A0AV96 593 aaKnown RBP29.37■■■□□ 2.29
CCNF-205ENST00000569093 TRIM43BA6NCK2 446 aa29.37■■■□□ 2.29
CCNF-205ENST00000569093 CFBP00751 764 aa29.37■■■□□ 2.29
CCNF-205ENST00000569093 FSCN1Q16658 493 aaKnown RBP29.37■■■□□ 2.29
CCNF-205ENST00000569093 DUSP28Q4G0W2 176 aa29.37■■■□□ 2.29
CCNF-205ENST00000569093 PIBF1Q8WXW3 757 aa29.37■■■□□ 2.29
CCNF-205ENST00000569093 TRIM43Q96BQ3 446 aaPredicted RBP29.37■■■□□ 2.29
CCNF-205ENST00000569093 TMEM87BQ96K49 555 aa29.37■■■□□ 2.29
CCNF-205ENST00000569093 LBHD1Q9BQE6 289 aaPredicted RBP29.37■■■□□ 2.29
CCNF-205ENST00000569093 MTA3Q9BTC8 594 aa29.37■■■□□ 2.29
CCNF-205ENST00000569093 RNF20Q5VTR2 975 aa29.36■■■□□ 2.29
CCNF-205ENST00000569093 CXCL17Q6UXB2 119 aa29.36■■■□□ 2.29
CCNF-205ENST00000569093 NFXL1Q6ZNB6 911 aa29.36■■■□□ 2.29
CCNF-205ENST00000569093 RASEFQ8IZ41 740 aa29.36■■■□□ 2.29
CCNF-205ENST00000569093 MPHOSPH6Q99547 160 aaKnown RBP29.36■■■□□ 2.29
CCNF-205ENST00000569093 MAF1Q9H063 256 aa29.36■■■□□ 2.29
CCNF-205ENST00000569093 Q9Y3F1 56 aa29.36■■■□□ 2.29
CCNF-205ENST00000569093 ELP1O95163 1332 aa29.36■■■□□ 2.29
CCNF-205ENST00000569093 LTBP2Q14767 1821 aa29.36■■■□□ 2.29
CCNF-205ENST00000569093 RMDN3Q96TC7 470 aa29.35■■■□□ 2.29
CCNF-205ENST00000569093 CCDC69A6NI79 296 aa29.34■■■□□ 2.29
CCNF-205ENST00000569093 DDAH1O94760 285 aa29.34■■■□□ 2.29
CCNF-205ENST00000569093 CLTBP09497 229 aa29.34■■■□□ 2.29
CCNF-205ENST00000569093 RXRAP19793 462 aa29.34■■■□□ 2.29
CCNF-205ENST00000569093 RAB11FIP4Q86YS3 637 aa29.34■■■□□ 2.29
CCNF-205ENST00000569093 TMTC2Q8N394 836 aa29.34■■■□□ 2.29
CCNF-205ENST00000569093 NSUN6Q8TEA1 469 aaKnown RBP29.34■■■□□ 2.29
CCNF-205ENST00000569093 MAP3K14Q99558 947 aa29.34■■■□□ 2.29
CCNF-205ENST00000569093 PNMA6FA0A0J9YX94 578 aa29.33■■■□□ 2.29
CCNF-205ENST00000569093 B4DLN1 442 aa29.33■■■□□ 2.29
CCNF-205ENST00000569093 SOX1O00570 391 aaPredicted RBP29.33■■■□□ 2.29
CCNF-205ENST00000569093 ITGB8P26012 769 aa29.33■■■□□ 2.29
CCNF-205ENST00000569093 CDK7P50613 346 aa29.33■■■□□ 2.29
CCNF-205ENST00000569093 HSD17B4P51659 736 aa29.33■■■□□ 2.29
CCNF-205ENST00000569093 MRPL12P52815 198 aaKnown RBP29.33■■■□□ 2.29
CCNF-205ENST00000569093 FAAP100Q0VG06 881 aa29.33■■■□□ 2.29
CCNF-205ENST00000569093 ANKRD33Q7Z3H0 272 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms