RNA–Protein interactions for RNA: ENST00000568799.1

GGA2-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 1,403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-212ENST00000568799 CATIPQ7Z7H3 387 aa24.58■■□□□ 1.53
GGA2-212ENST00000568799 TLK2Q86UE8 772 aa24.58■■□□□ 1.53
GGA2-212ENST00000568799 DNERQ8NFT8 737 aa24.58■■□□□ 1.53
GGA2-212ENST00000568799 MORC4Q8TE76 937 aa24.58■■□□□ 1.53
GGA2-212ENST00000568799 LSG1Q9H089 658 aaKnown RBP24.58■■□□□ 1.53
GGA2-212ENST00000568799 JMJD4Q9H9V9 463 aa24.58■■□□□ 1.53
GGA2-212ENST00000568799 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.57■■□□□ 1.52
GGA2-212ENST00000568799 MYADML2A6NDP7 307 aa24.57■■□□□ 1.52
GGA2-212ENST00000568799 TLE2Q04725 743 aa24.57■■□□□ 1.52
GGA2-212ENST00000568799 STAG2Q8N3U4 1231 aa24.57■■□□□ 1.52
GGA2-212ENST00000568799 AMNQ9BXJ7 453 aa24.57■■□□□ 1.52
GGA2-212ENST00000568799 MAD2L2Q9UI95 211 aa24.57■■□□□ 1.52
GGA2-212ENST00000568799 TAF6LQ9Y6J9 622 aa24.57■■□□□ 1.52
GGA2-212ENST00000568799 DDX49Q9Y6V7 483 aaKnown RBP24.57■■□□□ 1.52
GGA2-212ENST00000568799 ZEB2O60315 1214 aa24.56■■□□□ 1.52
GGA2-212ENST00000568799 PQBP1O60828 265 aaKnown RBP24.56■■□□□ 1.52
GGA2-212ENST00000568799 ASGR1P07306 291 aa24.56■■□□□ 1.52
GGA2-212ENST00000568799 CCSAPQ6IQ19 270 aaPredicted RBP24.56■■□□□ 1.52
GGA2-212ENST00000568799 SKAP1Q86WV1 359 aa24.56■■□□□ 1.52
GGA2-212ENST00000568799 TDHQ8IZJ6 230 aa24.56■■□□□ 1.52
GGA2-212ENST00000568799 PDGFCQ9NRA1 345 aa24.56■■□□□ 1.52
GGA2-212ENST00000568799 ELP1O95163 1332 aa24.56■■□□□ 1.52
GGA2-212ENST00000568799 SMPD1P17405 629 aa24.55■■□□□ 1.52
GGA2-212ENST00000568799 TRAF1Q13077 416 aa24.55■■□□□ 1.52
GGA2-212ENST00000568799 GRM4Q14833 912 aa24.55■■□□□ 1.52
GGA2-212ENST00000568799 RNF20Q5VTR2 975 aa24.55■■□□□ 1.52
GGA2-212ENST00000568799 TAPT1Q6NXT6 567 aa24.55■■□□□ 1.52
GGA2-212ENST00000568799 MB21D2Q8IYB1 491 aaPredicted RBP24.55■■□□□ 1.52
GGA2-212ENST00000568799 GNEQ9Y223 722 aaKnown RBP24.55■■□□□ 1.52
GGA2-212ENST00000568799 Q9Y3F1 56 aa24.55■■□□□ 1.52
GGA2-212ENST00000568799 MROH7Q68CQ1 1323 aa24.55■■□□□ 1.52
GGA2-212ENST00000568799 PALM3A6NDB9 673 aaPredicted RBP24.54■■□□□ 1.52
GGA2-212ENST00000568799 DCDC2CA8MYV0 355 aa24.54■■□□□ 1.52
GGA2-212ENST00000568799 DYNC1LI2O43237 492 aaPredicted RBP24.54■■□□□ 1.52
GGA2-212ENST00000568799 CLTBP09497 229 aa24.54■■□□□ 1.52
GGA2-212ENST00000568799 MCM5P33992 734 aa24.54■■□□□ 1.52
GGA2-212ENST00000568799 MTA3Q9BTC8 594 aa24.54■■□□□ 1.52
GGA2-212ENST00000568799 PDLIM7Q9NR12 457 aa24.54■■□□□ 1.52
GGA2-212ENST00000568799 SLC27A2O14975 620 aa24.53■■□□□ 1.52
GGA2-212ENST00000568799 ZBTB5O15062 677 aa24.53■■□□□ 1.52
GGA2-212ENST00000568799 BEX3Q00994 111 aa24.53■■□□□ 1.52
GGA2-212ENST00000568799 FSCN1Q16658 493 aaKnown RBP24.53■■□□□ 1.52
GGA2-212ENST00000568799 HOMER1Q86YM7 354 aa24.53■■□□□ 1.52
GGA2-212ENST00000568799 WDR11Q9BZH6 1224 aa24.53■■□□□ 1.52
GGA2-212ENST00000568799 A0A0U1RQG5 324 aaPredicted RBP24.52■■□□□ 1.52
GGA2-212ENST00000568799 PRC1O43663 620 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 CDC45O75419 566 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 ANTXR2P58335 489 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 NKX3-2P78367 333 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 IRX5P78411 483 aaPredicted RBP24.52■■□□□ 1.52
GGA2-212ENST00000568799 DUSP28Q4G0W2 176 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 CREB3L3Q68CJ9 461 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 NFXL1Q6ZNB6 911 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 TMTC2Q8N394 836 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 CTCFLQ8NI51 663 aaPredicted RBP24.52■■□□□ 1.52
GGA2-212ENST00000568799 TOX2Q96NM4 488 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 CABYRO75952 493 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 TROAPQ12815 778 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 ANKRD33Q7Z3H0 272 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 IGDCC4Q8TDY8 1250 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 NSUN6Q8TEA1 469 aaKnown RBP24.52■■□□□ 1.52
GGA2-212ENST00000568799 TMEM87BQ96K49 555 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 SENP2Q9HC62 589 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 TMEM39AQ9NV64 488 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 PCDH10Q9P2E7 1040 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 PCDHA1Q9Y5I3 950 aa24.52■■□□□ 1.52
GGA2-212ENST00000568799 LAMA3Q16787 3333 aa24.51■■□□□ 1.51
GGA2-212ENST00000568799 CCDC69A6NI79 296 aa24.51■■□□□ 1.51
GGA2-212ENST00000568799 CFBP00751 764 aa24.51■■□□□ 1.51
GGA2-212ENST00000568799 EDNRBP24530 442 aa24.51■■□□□ 1.51
GGA2-212ENST00000568799 KIF5BP33176 963 aa24.51■■□□□ 1.51
GGA2-212ENST00000568799 PPP2R5BQ15173 497 aa24.51■■□□□ 1.51
GGA2-212ENST00000568799 BRDTQ58F21 947 aaPredicted RBP24.51■■□□□ 1.51
GGA2-212ENST00000568799 SYTL5Q8TDW5 730 aaPredicted RBP24.51■■□□□ 1.51
GGA2-212ENST00000568799 SCFD2Q8WU76 684 aa24.51■■□□□ 1.51
GGA2-212ENST00000568799 LCTP09848 1927 aa24.5■■□□□ 1.51
GGA2-212ENST00000568799 DDAH1O94760 285 aa24.5■■□□□ 1.51
GGA2-212ENST00000568799 RAG1P15918 1043 aa24.5■■□□□ 1.51
GGA2-212ENST00000568799 NECTIN1Q15223 517 aa24.5■■□□□ 1.51
GGA2-212ENST00000568799 ARHGEF16Q5VV41 709 aa24.5■■□□□ 1.51
GGA2-212ENST00000568799 MTMR8Q96EF0 704 aa24.5■■□□□ 1.51
GGA2-212ENST00000568799 RMDN3Q96TC7 470 aa24.5■■□□□ 1.51
GGA2-212ENST00000568799 LY9Q9HBG7 655 aa24.5■■□□□ 1.51
GGA2-212ENST00000568799 LRRC37A2A6NM11 1700 aa24.5■■□□□ 1.51
GGA2-212ENST00000568799 TRIM43BA6NCK2 446 aa24.49■■□□□ 1.51
GGA2-212ENST00000568799 NKRFO15226 690 aaKnown RBP eCLIP24.49■■□□□ 1.51
GGA2-212ENST00000568799 CTAGE5O15320 804 aa24.49■■□□□ 1.51
GGA2-212ENST00000568799 CPT1AP50416 773 aa24.49■■□□□ 1.51
GGA2-212ENST00000568799 CXCL17Q6UXB2 119 aa24.49■■□□□ 1.51
GGA2-212ENST00000568799 SH3RF1Q7Z6J0 888 aa24.49■■□□□ 1.51
GGA2-212ENST00000568799 ZNF654Q8IZM8 581 aa24.49■■□□□ 1.51
GGA2-212ENST00000568799 TBC1D5Q92609 795 aa24.49■■□□□ 1.51
GGA2-212ENST00000568799 BADQ92934 168 aa24.49■■□□□ 1.51
GGA2-212ENST00000568799 TRIM43Q96BQ3 446 aaPredicted RBP24.49■■□□□ 1.51
GGA2-212ENST00000568799 PIGSQ96S52 555 aa24.49■■□□□ 1.51
GGA2-212ENST00000568799 IWS1Q96ST2 819 aa24.49■■□□□ 1.51
GGA2-212ENST00000568799 MAP3K14Q99558 947 aa24.49■■□□□ 1.51
GGA2-212ENST00000568799 RIOX1Q9H6W3 641 aa24.49■■□□□ 1.51
GGA2-212ENST00000568799 RBM47A0AV96 593 aaKnown RBP24.48■■□□□ 1.51
GGA2-212ENST00000568799 ARVCFO00192 962 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms