RNA–Protein interactions for RNA: ENST00000568750.1

TNRC6A-213, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 609 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-213ENST00000568750 TIMP1P01033 207 aa12.06□□□□□ -0.48
TNRC6A-213ENST00000568750 MYL3P08590 195 aa12.06□□□□□ -0.48
TNRC6A-213ENST00000568750 PARP1P09874 1014 aaKnown RBP12.06□□□□□ -0.48
TNRC6A-213ENST00000568750 SNHG28P0DPA3 235 aa12.06□□□□□ -0.48
TNRC6A-213ENST00000568750 ACRP10323 421 aa12.06□□□□□ -0.48
TNRC6A-213ENST00000568750 CDK7P50613 346 aa12.06□□□□□ -0.48
TNRC6A-213ENST00000568750 CHMP4BP1P59074 171 aa12.06□□□□□ -0.48
TNRC6A-213ENST00000568750 IFIT1BQ5T764 474 aaKnown RBP12.06□□□□□ -0.48
TNRC6A-213ENST00000568750 ENAHQ8N8S7 591 aaPredicted RBP12.06□□□□□ -0.48
TNRC6A-213ENST00000568750 OR6J1Q8NGC5 347 aa12.06□□□□□ -0.48
TNRC6A-213ENST00000568750 MPHOSPH6Q99547 160 aaKnown RBP12.06□□□□□ -0.48
TNRC6A-213ENST00000568750 PNMA2Q9UL42 364 aa12.06□□□□□ -0.48
TNRC6A-213ENST00000568750 CABYRO75952 493 aa12.05□□□□□ -0.48
TNRC6A-213ENST00000568750 CYP2C18P33260 490 aa12.05□□□□□ -0.48
TNRC6A-213ENST00000568750 TRDNQ13061 729 aa12.05□□□□□ -0.48
TNRC6A-213ENST00000568750 ITGA7Q13683 1181 aa12.05□□□□□ -0.48
TNRC6A-213ENST00000568750 FAM126BQ8IXS8 530 aa12.05□□□□□ -0.48
TNRC6A-213ENST00000568750 ADGRF4Q8IZF3 695 aa12.05□□□□□ -0.48
TNRC6A-213ENST00000568750 PPP1R13LQ8WUF5 828 aa12.05□□□□□ -0.48
TNRC6A-213ENST00000568750 RUFY2Q8WXA3 655 aa12.05□□□□□ -0.48
TNRC6A-213ENST00000568750 TBC1D5Q92609 795 aa12.05□□□□□ -0.48
TNRC6A-213ENST00000568750 GUCD1Q96NT3 240 aa12.05□□□□□ -0.48
TNRC6A-213ENST00000568750 CNNM2Q9H8M5 875 aa12.05□□□□□ -0.48
TNRC6A-213ENST00000568750 GPHNQ9NQX3 736 aaPredicted RBP12.05□□□□□ -0.48
TNRC6A-213ENST00000568750 TBX21Q9UL17 535 aa12.05□□□□□ -0.48
TNRC6A-213ENST00000568750 STXBP5LQ9Y2K9 1186 aa12.05□□□□□ -0.48
TNRC6A-213ENST00000568750 PLXNA1Q9UIW2 1896 aa12.05□□□□□ -0.48
TNRC6A-213ENST00000568750 WDR19Q8NEZ3 1342 aa12.05□□□□□ -0.48
TNRC6A-213ENST00000568750 CSF2RAP15509 400 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 CCL23P55773 120 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 PTH1RQ03431 593 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 PPIGQ13427 754 aaKnown RBP eCLIP12.04□□□□□ -0.484e-10■□□□□ 8.7
TNRC6A-213ENST00000568750 PPP2R5BQ15173 497 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 QRICH1Q2TAL8 776 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 DUSP28Q4G0W2 176 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 ASPRV1Q53RT3 343 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 FAM47CQ5HY64 1035 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 MFSD5Q6N075 450 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 CYB5R4Q7L1T6 521 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 FBXO11Q86XK2 927 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 TMEM199Q8N511 208 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 MORC4Q8TE76 937 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 COPS5Q92905 334 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.04□□□□□ -0.481e-16■□□□□ 8.4
TNRC6A-213ENST00000568750 TRPV6Q9H1D0 765 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 Q9Y3F1 56 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 ABCB11O95342 1321 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 LAMA3Q16787 3333 aa12.04□□□□□ -0.48
TNRC6A-213ENST00000568750 B4DLN1 442 aa12.03□□□□□ -0.48
TNRC6A-213ENST00000568750 CHMLP26374 656 aa12.03□□□□□ -0.48
TNRC6A-213ENST00000568750 NT5C2P49902 561 aa12.03□□□□□ -0.48
TNRC6A-213ENST00000568750 MRPL12P52815 198 aaKnown RBP12.03□□□□□ -0.48
TNRC6A-213ENST00000568750 SMAD3P84022 425 aaKnown RBP12.03□□□□□ -0.48
TNRC6A-213ENST00000568750 FAM109BQ6ICB4 259 aaPredicted RBP12.03□□□□□ -0.48
TNRC6A-213ENST00000568750 SEPT14Q6ZU15 432 aa12.03□□□□□ -0.48
TNRC6A-213ENST00000568750 CHST3Q7LGC8 479 aa12.03□□□□□ -0.48
TNRC6A-213ENST00000568750 STAG2Q8N3U4 1231 aa12.03□□□□□ -0.48
TNRC6A-213ENST00000568750 ANKS1AQ92625 1134 aa12.03□□□□□ -0.48
TNRC6A-213ENST00000568750 TAAR1Q96RJ0 339 aa12.03□□□□□ -0.48
TNRC6A-213ENST00000568750 SEMA6BQ9H3T3 888 aa12.03□□□□□ -0.48
TNRC6A-213ENST00000568750 HIPK3Q9H422 1215 aa12.03□□□□□ -0.48
TNRC6A-213ENST00000568750 JMJD4Q9H9V9 463 aa12.03□□□□□ -0.48
TNRC6A-213ENST00000568750 ERICH2A1L162 156 aa12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 IFIT3O14879 490 aaKnown RBP12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 CFBP00751 764 aa12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 TXNP10599 105 aaKnown RBP12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 EIF2AK2P19525 551 aaKnown RBP12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 CPT1AP50416 773 aa12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 NKX3-2P78367 333 aa12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 BRDTQ58F21 947 aaPredicted RBP12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 ARHGEF16Q5VV41 709 aa12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 ZNF365Q70YC5 407 aa12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 RALYLQ86SE5 291 aaKnown RBP12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 HOMER1Q86YM7 354 aa12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 MCF2L2Q86YR7 1114 aa12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 DNERQ8NFT8 737 aa12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 SYTL5Q8TDW5 730 aaPredicted RBP12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 SCFD2Q8WU76 684 aa12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 PIBF1Q8WXW3 757 aa12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 MYLIPQ8WY64 445 aa12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 CDX2Q99626 313 aaPredicted RBP12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 POLR3EQ9NVU0 708 aa12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 MRPL11Q9Y3B7 192 aaKnown RBP12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 U3KPZ7 1027 aaPredicted RBP12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 GRIN2DO15399 1336 aa12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 UMODL1Q5DID0 1318 aa12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 RAD50Q92878 1312 aa12.02□□□□□ -0.49
TNRC6A-213ENST00000568750 LOC102724159A0A0B4J2E5 919 aa12.01□□□□□ -0.49
TNRC6A-213ENST00000568750 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.01□□□□□ -0.49
TNRC6A-213ENST00000568750 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.01□□□□□ -0.49
TNRC6A-213ENST00000568750 RBM47A0AV96 593 aaKnown RBP12.01□□□□□ -0.49
TNRC6A-213ENST00000568750 GRXCR1A8MXD5 290 aa12.01□□□□□ -0.49
TNRC6A-213ENST00000568750 KLRF2D3W0D1 207 aa12.01□□□□□ -0.49
TNRC6A-213ENST00000568750 DLL1O00548 723 aa12.01□□□□□ -0.49
TNRC6A-213ENST00000568750 B4GALT4O60513 344 aa12.01□□□□□ -0.49
TNRC6A-213ENST00000568750 ARIH2O95376 493 aa12.01□□□□□ -0.49
TNRC6A-213ENST00000568750 CD4P01730 458 aa12.01□□□□□ -0.49
TNRC6A-213ENST00000568750 CYP21A2P08686 494 aa12.01□□□□□ -0.49
TNRC6A-213ENST00000568750 CYP2C9P11712 490 aa12.01□□□□□ -0.49
TNRC6A-213ENST00000568750 TTLL4Q14679 1199 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms