RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 PCSK9Q8NBP7 692 aaKnown RBP34.24■■■■□ 3.07
RAB40C-211ENST00000568586 ATP11BQ9Y2G3 1177 aa34.24■■■■□ 3.07
RAB40C-211ENST00000568586 Q9Y3F1 56 aa34.24■■■■□ 3.07
RAB40C-211ENST00000568586 RBM47A0AV96 593 aaKnown RBP34.23■■■■□ 3.07
RAB40C-211ENST00000568586 SLC35G1Q2M3R5 365 aa34.23■■■■□ 3.07
RAB40C-211ENST00000568586 NUP133Q8WUM0 1156 aa34.23■■■■□ 3.07
RAB40C-211ENST00000568586 RIOX1Q9H6W3 641 aa34.23■■■■□ 3.07
RAB40C-211ENST00000568586 VAT1LQ9HCJ6 419 aa34.23■■■■□ 3.07
RAB40C-211ENST00000568586 ANO2Q9NQ90 1003 aa34.23■■■■□ 3.07
RAB40C-211ENST00000568586 PDGFCQ9NRA1 345 aa34.23■■■■□ 3.07
RAB40C-211ENST00000568586 C6orf222P0C671 652 aaPredicted RBP34.22■■■■□ 3.07
RAB40C-211ENST00000568586 SMPD1P17405 629 aa34.22■■■■□ 3.07
RAB40C-211ENST00000568586 IRX5P78411 483 aaPredicted RBP34.22■■■■□ 3.07
RAB40C-211ENST00000568586 GHRHRQ02643 423 aa34.22■■■■□ 3.07
RAB40C-211ENST00000568586 FBXO16Q8IX29 292 aaPredicted RBP34.22■■■■□ 3.07
RAB40C-211ENST00000568586 MAP3K14Q99558 947 aa34.22■■■■□ 3.07
RAB40C-211ENST00000568586 LY9Q9HBG7 655 aa34.22■■■■□ 3.07
RAB40C-211ENST00000568586 MRPL11Q9Y3B7 192 aaKnown RBP34.22■■■■□ 3.07
RAB40C-211ENST00000568586 ELP1O95163 1332 aa34.22■■■■□ 3.07
RAB40C-211ENST00000568586 SZT2Q5T011 3432 aa34.21■■■■□ 3.07
RAB40C-211ENST00000568586 ZBTB5O15062 677 aa34.21■■■■□ 3.07
RAB40C-211ENST00000568586 DHX16O60231 1041 aaKnown RBP34.21■■■■□ 3.07
RAB40C-211ENST00000568586 MCF2L2Q86YR7 1114 aa34.21■■■■□ 3.07
RAB40C-211ENST00000568586 AMNQ9BXJ7 453 aa34.21■■■■□ 3.07
RAB40C-211ENST00000568586 CDC45O75419 566 aa34.2■■■■□ 3.07
RAB40C-211ENST00000568586 MCM5P33992 734 aa34.2■■■■□ 3.07
RAB40C-211ENST00000568586 TLE2Q04725 743 aa34.2■■■■□ 3.07
RAB40C-211ENST00000568586 GNASQ5JWF2 1037 aa34.2■■■■□ 3.07
RAB40C-211ENST00000568586 EEPD1Q7L9B9 569 aa34.2■■■■□ 3.07
RAB40C-211ENST00000568586 CATIPQ7Z7H3 387 aa34.2■■■■□ 3.07
RAB40C-211ENST00000568586 TBC1D5Q92609 795 aa34.2■■■■□ 3.07
RAB40C-211ENST00000568586 ASGR1P07306 291 aa34.19■■■■□ 3.06
RAB40C-211ENST00000568586 ANKRD33Q7Z3H0 272 aa34.19■■■■□ 3.06
RAB40C-211ENST00000568586 SYTL5Q8TDW5 730 aaPredicted RBP34.19■■■■□ 3.06
RAB40C-211ENST00000568586 TMEM87BQ96K49 555 aa34.19■■■■□ 3.06
RAB40C-211ENST00000568586 TOX2Q96NM4 488 aa34.19■■■■□ 3.06
RAB40C-211ENST00000568586 MPHOSPH6Q99547 160 aaKnown RBP34.19■■■■□ 3.06
RAB40C-211ENST00000568586 STARD7Q9NQZ5 370 aa34.19■■■■□ 3.06
RAB40C-211ENST00000568586 PRC1O43663 620 aa34.18■■■■□ 3.06
RAB40C-211ENST00000568586 PPP1R11O60927 126 aaPredicted RBP34.18■■■■□ 3.06
RAB40C-211ENST00000568586 COL9A3Q14050 684 aaPredicted RBP34.18■■■■□ 3.06
RAB40C-211ENST00000568586 DUSP28Q4G0W2 176 aa34.18■■■■□ 3.06
RAB40C-211ENST00000568586 CASC1Q6TDU7 716 aa34.18■■■■□ 3.06
RAB40C-211ENST00000568586 TLK2Q86UE8 772 aa34.18■■■■□ 3.06
RAB40C-211ENST00000568586 TMTC2Q8N394 836 aa34.18■■■■□ 3.06
RAB40C-211ENST00000568586 PDLIM7Q9NR12 457 aa34.18■■■■□ 3.06
RAB40C-211ENST00000568586 B4DLN1 442 aa34.17■■■■□ 3.06
RAB40C-211ENST00000568586 OPLAHO14841 1288 aa34.17■■■■□ 3.06
RAB40C-211ENST00000568586 CYTH3O43739 400 aa34.17■■■■□ 3.06
RAB40C-211ENST00000568586 MRPL12P52815 198 aaKnown RBP34.17■■■■□ 3.06
RAB40C-211ENST00000568586 GLT1D1Q96MS3 346 aa34.17■■■■□ 3.06
RAB40C-211ENST00000568586 GPHNQ9NQX3 736 aaPredicted RBP34.17■■■■□ 3.06
RAB40C-211ENST00000568586 PRKAG2Q9UGJ0 569 aa34.17■■■■□ 3.06
RAB40C-211ENST00000568586 DDAH1O94760 285 aa34.16■■■■□ 3.06
RAB40C-211ENST00000568586 LIFRP42702 1097 aa34.16■■■■□ 3.06
RAB40C-211ENST00000568586 CDK7P50613 346 aa34.16■■■■□ 3.06
RAB40C-211ENST00000568586 TSGA10IPQ3SY00 556 aa34.16■■■■□ 3.06
RAB40C-211ENST00000568586 TMEM63BQ5T3F8 832 aa34.16■■■■□ 3.06
RAB40C-211ENST00000568586 NOL8Q76FK4 1167 aaKnown RBP34.16■■■■□ 3.06
RAB40C-211ENST00000568586 MAP3K20Q9NYL2 800 aaKnown RBP34.16■■■■□ 3.06
RAB40C-211ENST00000568586 COL20A1Q9P218 1284 aa34.16■■■■□ 3.06
RAB40C-211ENST00000568586 SH2B2O14492 632 aaPredicted RBP34.15■■■■□ 3.06
RAB40C-211ENST00000568586 HSD17B4P51659 736 aa34.15■■■■□ 3.06
RAB40C-211ENST00000568586 PDE4DQ08499 809 aa34.15■■■■□ 3.06
RAB40C-211ENST00000568586 TRAF1Q13077 416 aa34.15■■■■□ 3.06
RAB40C-211ENST00000568586 FSCN1Q16658 493 aaKnown RBP34.15■■■■□ 3.06
RAB40C-211ENST00000568586 RNF20Q5VTR2 975 aa34.15■■■■□ 3.06
RAB40C-211ENST00000568586 ZNF654Q8IZM8 581 aa34.15■■■■□ 3.06
RAB40C-211ENST00000568586 SAMD3Q8N6K7 520 aa34.15■■■■□ 3.06
RAB40C-211ENST00000568586 WDR11Q9BZH6 1224 aa34.15■■■■□ 3.06
RAB40C-211ENST00000568586 AP5M1Q9H0R1 490 aa34.15■■■■□ 3.06
RAB40C-211ENST00000568586 MYH6P13533 1939 aa34.14■■■■□ 3.06
RAB40C-211ENST00000568586 DYNC1LI2O43237 492 aaPredicted RBP34.14■■■■□ 3.06
RAB40C-211ENST00000568586 SMARCA1P28370 1054 aa34.14■■■■□ 3.06
RAB40C-211ENST00000568586 MDM2Q00987 491 aaPredicted RBP34.14■■■■□ 3.06
RAB40C-211ENST00000568586 NSUN6Q8TEA1 469 aaKnown RBP34.14■■■■□ 3.06
RAB40C-211ENST00000568586 TAAR1Q96RJ0 339 aa34.14■■■■□ 3.06
RAB40C-211ENST00000568586 IWS1Q96ST2 819 aa34.14■■■■□ 3.06
RAB40C-211ENST00000568586 LBHD1Q9BQE6 289 aaPredicted RBP34.14■■■■□ 3.06
RAB40C-211ENST00000568586 UBE2OQ9C0C9 1292 aaKnown RBP34.14■■■■□ 3.06
RAB40C-211ENST00000568586 PCDH10Q9P2E7 1040 aa34.14■■■■□ 3.06
RAB40C-211ENST00000568586 PCDHA1Q9Y5I3 950 aa34.14■■■■□ 3.06
RAB40C-211ENST00000568586 TRIM43BA6NCK2 446 aa34.13■■■■□ 3.05
RAB40C-211ENST00000568586 BEX3Q00994 111 aa34.13■■■■□ 3.05
RAB40C-211ENST00000568586 TDHQ8IZJ6 230 aa34.13■■■■□ 3.05
RAB40C-211ENST00000568586 TRIM43Q96BQ3 446 aaPredicted RBP34.13■■■■□ 3.05
RAB40C-211ENST00000568586 PIGSQ96S52 555 aa34.13■■■■□ 3.05
RAB40C-211ENST00000568586 PNMA6FA0A0J9YX94 578 aa34.12■■■■□ 3.05
RAB40C-211ENST00000568586 KIAA0355O15063 1070 aa34.12■■■■□ 3.05
RAB40C-211ENST00000568586 CABYRO75952 493 aa34.12■■■■□ 3.05
RAB40C-211ENST00000568586 CLTBP09497 229 aa34.12■■■■□ 3.05
RAB40C-211ENST00000568586 PTGS1P23219 599 aa34.12■■■■□ 3.05
RAB40C-211ENST00000568586 SH3RF1Q7Z6J0 888 aa34.12■■■■□ 3.05
RAB40C-211ENST00000568586 SCFD2Q8WU76 684 aa34.12■■■■□ 3.05
RAB40C-211ENST00000568586 SLC43A3Q8NBI5 491 aa34.11■■■■□ 3.05
RAB40C-211ENST00000568586 SPZ1Q9BXG8 430 aa34.11■■■■□ 3.05
RAB40C-211ENST00000568586 LTBP2Q14767 1821 aa34.11■■■■□ 3.05
RAB40C-211ENST00000568586 BAZ2BQ9UIF8 2168 aaKnown RBP34.11■■■■□ 3.05
RAB40C-211ENST00000568586 MROH7Q68CQ1 1323 aa34.1■■■■□ 3.05
RAB40C-211ENST00000568586 A0A0U1RQG5 324 aaPredicted RBP34.1■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms