RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 GNEQ9Y223 722 aaKnown RBP16.84■□□□□ 0.29
CMTM3-215ENST00000568477 TAF6LQ9Y6J9 622 aa16.84■□□□□ 0.29
CMTM3-215ENST00000568477 ELP1O95163 1332 aa16.84■□□□□ 0.29
CMTM3-215ENST00000568477 ABCB11O95342 1321 aa16.84■□□□□ 0.29
CMTM3-215ENST00000568477 CTAGE5O15320 804 aa16.83■□□□□ 0.28
CMTM3-215ENST00000568477 CLTBP09497 229 aa16.83■□□□□ 0.28
CMTM3-215ENST00000568477 SMPD1P17405 629 aa16.83■□□□□ 0.28
CMTM3-215ENST00000568477 STOX1Q6ZVD7 989 aa16.83■□□□□ 0.28
CMTM3-215ENST00000568477 FBXO11Q86XK2 927 aa16.83■□□□□ 0.28
CMTM3-215ENST00000568477 DNERQ8NFT8 737 aa16.83■□□□□ 0.28
CMTM3-215ENST00000568477 VTI1AQ96AJ9 217 aa16.83■□□□□ 0.28
CMTM3-215ENST00000568477 MAF1Q9H063 256 aa16.83■□□□□ 0.28
CMTM3-215ENST00000568477 JMJD4Q9H9V9 463 aa16.83■□□□□ 0.28
CMTM3-215ENST00000568477 DCDC2CA8MYV0 355 aa16.82■□□□□ 0.28
CMTM3-215ENST00000568477 B4DLN1 442 aa16.82■□□□□ 0.28
CMTM3-215ENST00000568477 KLRF2D3W0D1 207 aa16.82■□□□□ 0.28
CMTM3-215ENST00000568477 DYNC1LI2O43237 492 aaPredicted RBP16.82■□□□□ 0.28
CMTM3-215ENST00000568477 MRPL12P52815 198 aaKnown RBP16.82■□□□□ 0.28
CMTM3-215ENST00000568477 BEX3Q00994 111 aa16.82■□□□□ 0.28
CMTM3-215ENST00000568477 PDE4DQ08499 809 aa16.82■□□□□ 0.28
CMTM3-215ENST00000568477 WTAPQ15007 396 aa16.82■□□□□ 0.28
CMTM3-215ENST00000568477 FSCN1Q16658 493 aaKnown RBP16.82■□□□□ 0.28
CMTM3-215ENST00000568477 LRIT3Q3SXY7 679 aa16.82■□□□□ 0.28
CMTM3-215ENST00000568477 BMP2KLQ5H9B9 411 aa16.82■□□□□ 0.28
CMTM3-215ENST00000568477 ANKRD33Q7Z3H0 272 aa16.82■□□□□ 0.28
CMTM3-215ENST00000568477 SH3RF1Q7Z6J0 888 aa16.82■□□□□ 0.28
CMTM3-215ENST00000568477 STAG2Q8N3U4 1231 aa16.82■□□□□ 0.28
CMTM3-215ENST00000568477 LRCH3Q96II8 777 aa16.82■□□□□ 0.28
CMTM3-215ENST00000568477 TOX2Q96NM4 488 aa16.82■□□□□ 0.28
CMTM3-215ENST00000568477 ESYT1Q9BSJ8 1104 aa16.82■□□□□ 0.28
CMTM3-215ENST00000568477 MRPL11Q9Y3B7 192 aaKnown RBP16.82■□□□□ 0.28
CMTM3-215ENST00000568477 Q9Y3F1 56 aa16.82■□□□□ 0.28
CMTM3-215ENST00000568477 LTBP2Q14767 1821 aa16.82■□□□□ 0.28
CMTM3-215ENST00000568477 LAMA3Q16787 3333 aa16.81■□□□□ 0.28
CMTM3-215ENST00000568477 MROH7Q68CQ1 1323 aa16.81■□□□□ 0.28
CMTM3-215ENST00000568477 A0A0U1RQG5 324 aaPredicted RBP16.81■□□□□ 0.28
CMTM3-215ENST00000568477 TRIM43BA6NCK2 446 aa16.81■□□□□ 0.28
CMTM3-215ENST00000568477 ZEB2O60315 1214 aa16.81■□□□□ 0.28
CMTM3-215ENST00000568477 GRM4Q14833 912 aa16.81■□□□□ 0.28
CMTM3-215ENST00000568477 TMEM67Q5HYA8 995 aa16.81■□□□□ 0.28
CMTM3-215ENST00000568477 MCF2L2Q86YR7 1114 aa16.81■□□□□ 0.28
CMTM3-215ENST00000568477 BADQ92934 168 aa16.81■□□□□ 0.28
CMTM3-215ENST00000568477 TRIM43Q96BQ3 446 aaPredicted RBP16.81■□□□□ 0.28
CMTM3-215ENST00000568477 LSG1Q9H089 658 aaKnown RBP16.81■□□□□ 0.28
CMTM3-215ENST00000568477 TMEM39AQ9NV64 488 aa16.81■□□□□ 0.28
CMTM3-215ENST00000568477 MAD2L2Q9UI95 211 aa16.81■□□□□ 0.28
CMTM3-215ENST00000568477 PALM3A6NDB9 673 aaPredicted RBP16.8■□□□□ 0.28
CMTM3-215ENST00000568477 KIAA0355O15063 1070 aa16.8■□□□□ 0.28
CMTM3-215ENST00000568477 CABYRO75952 493 aa16.8■□□□□ 0.28
CMTM3-215ENST00000568477 EDNRBP24530 442 aa16.8■□□□□ 0.28
CMTM3-215ENST00000568477 DUSP28Q4G0W2 176 aa16.8■□□□□ 0.28
CMTM3-215ENST00000568477 CHST3Q7LGC8 479 aa16.8■□□□□ 0.28
CMTM3-215ENST00000568477 SKAP1Q86WV1 359 aa16.8■□□□□ 0.28
CMTM3-215ENST00000568477 MB21D2Q8IYB1 491 aaPredicted RBP16.8■□□□□ 0.28
CMTM3-215ENST00000568477 SYTL5Q8TDW5 730 aaPredicted RBP16.8■□□□□ 0.28
CMTM3-215ENST00000568477 AMNQ9BXJ7 453 aa16.8■□□□□ 0.28
CMTM3-215ENST00000568477 WDR11Q9BZH6 1224 aa16.8■□□□□ 0.28
CMTM3-215ENST00000568477 SENP2Q9HC62 589 aa16.8■□□□□ 0.28
CMTM3-215ENST00000568477 MYH6P13533 1939 aa16.79■□□□□ 0.28
CMTM3-215ENST00000568477 RBM47A0AV96 593 aaKnown RBP16.79■□□□□ 0.28
CMTM3-215ENST00000568477 ARVCFO00192 962 aa16.79■□□□□ 0.28
CMTM3-215ENST00000568477 RAG1P15918 1043 aa16.79■□□□□ 0.28
CMTM3-215ENST00000568477 PTGS1P23219 599 aa16.79■□□□□ 0.28
CMTM3-215ENST00000568477 CDK7P50613 346 aa16.79■□□□□ 0.28
CMTM3-215ENST00000568477 ANTXR2P58335 489 aa16.79■□□□□ 0.28
CMTM3-215ENST00000568477 FAAP100Q0VG06 881 aa16.79■□□□□ 0.28
CMTM3-215ENST00000568477 TMEM63BQ5T3F8 832 aa16.79■□□□□ 0.28
CMTM3-215ENST00000568477 CXCL17Q6UXB2 119 aa16.79■□□□□ 0.28
CMTM3-215ENST00000568477 CATIPQ7Z7H3 387 aa16.79■□□□□ 0.28
CMTM3-215ENST00000568477 SCFD2Q8WU76 684 aa16.79■□□□□ 0.28
CMTM3-215ENST00000568477 TBC1D5Q92609 795 aa16.79■□□□□ 0.28
CMTM3-215ENST00000568477 MTMR8Q96EF0 704 aa16.79■□□□□ 0.28
CMTM3-215ENST00000568477 ANO2Q9NQ90 1003 aa16.79■□□□□ 0.28
CMTM3-215ENST00000568477 ZBTB5O15062 677 aa16.78■□□□□ 0.28
CMTM3-215ENST00000568477 TROAPQ12815 778 aa16.78■□□□□ 0.28
CMTM3-215ENST00000568477 TRAF1Q13077 416 aa16.78■□□□□ 0.28
CMTM3-215ENST00000568477 PPP2R5BQ15173 497 aa16.78■□□□□ 0.28
CMTM3-215ENST00000568477 GPR153Q6NV75 609 aa16.78■□□□□ 0.28
CMTM3-215ENST00000568477 CASC1Q6TDU7 716 aa16.78■□□□□ 0.28
CMTM3-215ENST00000568477 NSUN6Q8TEA1 469 aaKnown RBP16.78■□□□□ 0.28
CMTM3-215ENST00000568477 SZT2Q5T011 3432 aa16.78■□□□□ 0.28
CMTM3-215ENST00000568477 SLC27A2O14975 620 aa16.77■□□□□ 0.28
CMTM3-215ENST00000568477 NKRFO15226 690 aaKnown RBP eCLIP16.77■□□□□ 0.282e-6■■■■□ 19.6
CMTM3-215ENST00000568477 TLR3O15455 904 aaKnown RBP16.77■□□□□ 0.28
CMTM3-215ENST00000568477 ITGB8P26012 769 aa16.77■□□□□ 0.28
CMTM3-215ENST00000568477 CREB3L3Q68CJ9 461 aa16.77■□□□□ 0.28
CMTM3-215ENST00000568477 HOMER1Q86YM7 354 aa16.77■□□□□ 0.28
CMTM3-215ENST00000568477 OR6J1Q8NGC5 347 aa16.77■□□□□ 0.28
CMTM3-215ENST00000568477 IGDCC4Q8TDY8 1250 aa16.77■□□□□ 0.28
CMTM3-215ENST00000568477 TAAR1Q96RJ0 339 aa16.77■□□□□ 0.28
CMTM3-215ENST00000568477 RMDN3Q96TC7 470 aa16.77■□□□□ 0.28
CMTM3-215ENST00000568477 MTA3Q9BTC8 594 aa16.77■□□□□ 0.28
CMTM3-215ENST00000568477 RIOX1Q9H6W3 641 aa16.77■□□□□ 0.28
CMTM3-215ENST00000568477 COL20A1Q9P218 1284 aa16.77■□□□□ 0.28
CMTM3-215ENST00000568477 TBX21Q9UL17 535 aa16.77■□□□□ 0.28
CMTM3-215ENST00000568477 PRC1O43663 620 aa16.76■□□□□ 0.27
CMTM3-215ENST00000568477 PPP1R11O60927 126 aaPredicted RBP16.76■□□□□ 0.27
CMTM3-215ENST00000568477 DDAH1O94760 285 aa16.76■□□□□ 0.27
CMTM3-215ENST00000568477 CFBP00751 764 aa16.76■□□□□ 0.27
CMTM3-215ENST00000568477 MCM5P33992 734 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms