RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 A0A0U1RQG5 324 aaPredicted RBP15.05■□□□□ -0
TSC2-220ENST00000568238 CTAGE5O15320 804 aa15.05■□□□□ -0
TSC2-220ENST00000568238 RAG1P15918 1043 aa15.05■□□□□ -0
TSC2-220ENST00000568238 SMPD1P17405 629 aa15.05■□□□□ -0
TSC2-220ENST00000568238 ITGB8P26012 769 aa15.05■□□□□ -0
TSC2-220ENST00000568238 CALML3P27482 149 aa15.05■□□□□ -0
TSC2-220ENST00000568238 BEX3Q00994 111 aa15.05■□□□□ -0
TSC2-220ENST00000568238 FAAP100Q0VG06 881 aa15.05■□□□□ -0
TSC2-220ENST00000568238 FSCN1Q16658 493 aaKnown RBP15.05■□□□□ -0
TSC2-220ENST00000568238 USH1GQ495M9 461 aa15.05■□□□□ -0
TSC2-220ENST00000568238 IQSEC1Q6DN90 963 aa15.05■□□□□ -0
TSC2-220ENST00000568238 TAPT1Q6NXT6 567 aa15.05■□□□□ -0
TSC2-220ENST00000568238 RNF207Q6ZRF8 634 aa15.05■□□□□ -0
TSC2-220ENST00000568238 KIAA1211Q6ZU35 1233 aa15.05■□□□□ -0
TSC2-220ENST00000568238 Q7L0L9 218 aa15.05■□□□□ -0
TSC2-220ENST00000568238 AP5M1Q9H0R1 490 aa15.05■□□□□ -0
TSC2-220ENST00000568238 CPVLQ9H3G5 476 aa15.05■□□□□ -0
TSC2-220ENST00000568238 ANO2Q9NQ90 1003 aa15.05■□□□□ -0
TSC2-220ENST00000568238 PDGFCQ9NRA1 345 aa15.05■□□□□ -0
TSC2-220ENST00000568238 ZSWIM5Q9P217 1185 aa15.05■□□□□ -0
TSC2-220ENST00000568238 SHHQ15465 462 aa15.04■□□□□ -0
TSC2-220ENST00000568238 CDC37Q16543 378 aaPredicted RBP15.04■□□□□ -0
TSC2-220ENST00000568238 C9orf50Q5SZB4 431 aa15.04■□□□□ -0
TSC2-220ENST00000568238 MPHOSPH6Q99547 160 aaKnown RBP15.04■□□□□ -0
TSC2-220ENST00000568238 UBA5Q9GZZ9 404 aa15.04■□□□□ -0
TSC2-220ENST00000568238 TBX21Q9UL17 535 aa15.04■□□□□ -0
TSC2-220ENST00000568238 ARVCFO00192 962 aa15.03■□□□□ -0
TSC2-220ENST00000568238 DYNC1LI2O43237 492 aaPredicted RBP15.03■□□□□ -0
TSC2-220ENST00000568238 ZEB2O60315 1214 aa15.03■□□□□ -0
TSC2-220ENST00000568238 PARP1P09874 1014 aaKnown RBP15.03■□□□□ -0
TSC2-220ENST00000568238 PTGS1P23219 599 aa15.03■□□□□ -0
TSC2-220ENST00000568238 CDK7P50613 346 aa15.03■□□□□ -0
TSC2-220ENST00000568238 RPS6P62753 249 aaKnown RBP15.03■□□□□ -0
TSC2-220ENST00000568238 FPGSQ05932 587 aa15.03■□□□□ -0
TSC2-220ENST00000568238 IFIT1BQ5T764 474 aaKnown RBP15.03■□□□□ -0
TSC2-220ENST00000568238 CXCL17Q6UXB2 119 aa15.03■□□□□ -0
TSC2-220ENST00000568238 LSG1Q9H089 658 aaKnown RBP15.03■□□□□ -0
TSC2-220ENST00000568238 Q9Y3F1 56 aa15.03■□□□□ -0
TSC2-220ENST00000568238 U3KPZ7 1027 aaPredicted RBP15.03■□□□□ -0
TSC2-220ENST00000568238 KIAA1217Q5T5P2 1943 aa15.03■□□□□ -0
TSC2-220ENST00000568238 ABCB11O95342 1321 aa15.02■□□□□ -0
TSC2-220ENST00000568238 TLR3O15455 904 aaKnown RBP15.02■□□□□ -0
TSC2-220ENST00000568238 DHX16O60231 1041 aaKnown RBP15.02■□□□□ -0
TSC2-220ENST00000568238 CABYRO75952 493 aa15.02■□□□□ -0
TSC2-220ENST00000568238 PDE4DQ08499 809 aa15.02■□□□□ -0
TSC2-220ENST00000568238 TRDNQ13061 729 aa15.02■□□□□ -0
TSC2-220ENST00000568238 DUSP28Q4G0W2 176 aa15.02■□□□□ -0
TSC2-220ENST00000568238 FAM126BQ8IXS8 530 aa15.02■□□□□ -0
TSC2-220ENST00000568238 ADGRF4Q8IZF3 695 aa15.02■□□□□ -0
TSC2-220ENST00000568238 DNERQ8NFT8 737 aa15.02■□□□□ -0
TSC2-220ENST00000568238 RBM8AQ9Y5S9 174 aaKnown RBP15.02■□□□□ -0
TSC2-220ENST00000568238 PRUNE2Q8WUY3 3088 aa15.01□□□□□ -0.01
TSC2-220ENST00000568238 B4DLN1 442 aa15.01□□□□□ -0.01
TSC2-220ENST00000568238 TIMP1P01033 207 aa15.01□□□□□ -0.01
TSC2-220ENST00000568238 CYP21A2P08686 494 aa15.01□□□□□ -0.01
TSC2-220ENST00000568238 EDNRBP24530 442 aa15.01□□□□□ -0.01
TSC2-220ENST00000568238 MRPL12P52815 198 aaKnown RBP15.01□□□□□ -0.01
TSC2-220ENST00000568238 SEC23AQ15436 765 aa15.01□□□□□ -0.01
TSC2-220ENST00000568238 QRICH1Q2TAL8 776 aa15.01□□□□□ -0.01
TSC2-220ENST00000568238 TMEM63BQ5T3F8 832 aa15.01□□□□□ -0.01
TSC2-220ENST00000568238 RGS22Q8NE09 1264 aa15.01□□□□□ -0.01
TSC2-220ENST00000568238 RNPC3Q96LT9 517 aaKnown RBP15.01□□□□□ -0.01
TSC2-220ENST00000568238 WDR11Q9BZH6 1224 aa15.01□□□□□ -0.01
TSC2-220ENST00000568238 MTMR10Q9NXD2 777 aa15.01□□□□□ -0.01
TSC2-220ENST00000568238 SCN10AQ9Y5Y9 1956 aa15□□□□□ -0.01
TSC2-220ENST00000568238 RBM47A0AV96 593 aaKnown RBP15□□□□□ -0.01
TSC2-220ENST00000568238 EPHB4P54760 987 aa15□□□□□ -0.01
TSC2-220ENST00000568238 PPP2R5BQ15173 497 aa15□□□□□ -0.01
TSC2-220ENST00000568238 FAM109BQ6ICB4 259 aaPredicted RBP15□□□□□ -0.01
TSC2-220ENST00000568238 CYB5R4Q7L1T6 521 aa15□□□□□ -0.01
TSC2-220ENST00000568238 RALYLQ86SE5 291 aaKnown RBP15□□□□□ -0.01
TSC2-220ENST00000568238 SLC43A3Q8NBI5 491 aa15□□□□□ -0.01
TSC2-220ENST00000568238 MAP4K1Q92918 833 aa15□□□□□ -0.01
TSC2-220ENST00000568238 MAF1Q9H063 256 aa15□□□□□ -0.01
TSC2-220ENST00000568238 JMJD4Q9H9V9 463 aa15□□□□□ -0.01
TSC2-220ENST00000568238 CHD9Q3L8U1 2897 aa15□□□□□ -0.01
TSC2-220ENST00000568238 BAZ2BQ9UIF8 2168 aaKnown RBP15□□□□□ -0.01
TSC2-220ENST00000568238 CPT1AP50416 773 aa14.99□□□□□ -0.01
TSC2-220ENST00000568238 ITGA7Q13683 1181 aa14.99□□□□□ -0.01
TSC2-220ENST00000568238 ZNF697Q5TEC3 545 aa14.99□□□□□ -0.01
TSC2-220ENST00000568238 MFSD5Q6N075 450 aa14.99□□□□□ -0.01
TSC2-220ENST00000568238 FBXO11Q86XK2 927 aa14.99□□□□□ -0.01
TSC2-220ENST00000568238 MCF2L2Q86YR7 1114 aa14.99□□□□□ -0.01
TSC2-220ENST00000568238 OR6J1Q8NGC5 347 aa14.99□□□□□ -0.01
TSC2-220ENST00000568238 SCFD2Q8WU76 684 aa14.99□□□□□ -0.01
TSC2-220ENST00000568238 SEZ6LQ9BYH1 1024 aa14.99□□□□□ -0.01
TSC2-220ENST00000568238 STXBP5LQ9Y2K9 1186 aa14.99□□□□□ -0.01
TSC2-220ENST00000568238 MRPL11Q9Y3B7 192 aaKnown RBP14.99□□□□□ -0.01
TSC2-220ENST00000568238 ERICH2A1L162 156 aa14.98□□□□□ -0.01
TSC2-220ENST00000568238 NKRFO15226 690 aaKnown RBP eCLIP14.98□□□□□ -0.01
TSC2-220ENST00000568238 REC8O95072 547 aa14.98□□□□□ -0.01
TSC2-220ENST00000568238 CD4P01730 458 aa14.98□□□□□ -0.01
TSC2-220ENST00000568238 SMAD3P84022 425 aaKnown RBP14.98□□□□□ -0.01
TSC2-220ENST00000568238 PPIGQ13427 754 aaKnown RBP eCLIP14.98□□□□□ -0.014e-8■■□□□ 14.4
TSC2-220ENST00000568238 SART3Q15020 963 aaKnown RBP14.98□□□□□ -0.01
TSC2-220ENST00000568238 STAG2Q8N3U4 1231 aa14.98□□□□□ -0.01
TSC2-220ENST00000568238 NCOA7Q8NI08 942 aa14.98□□□□□ -0.01
TSC2-220ENST00000568238 SYTL5Q8TDW5 730 aaPredicted RBP14.98□□□□□ -0.01
TSC2-220ENST00000568238 PPP1R12CQ9BZL4 782 aa14.98□□□□□ -0.01
TSC2-220ENST00000568238 VAT1LQ9HCJ6 419 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms