RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 PRKAG2Q9UGJ0 569 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 SYNRGQ9UMZ2 1314 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 PHF24Q9UPV7 400 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 ATP11BQ9Y2G3 1177 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 TRIOBPQ9H2D6 2365 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 ASTN1O14525 1302 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 WDR19Q8NEZ3 1342 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 A0A1W2PQ45 241 aaPredicted RBP5.6□□□□□ -1.51
CLK3-219ENST00000567805 A0A1W2PQY0 241 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 MOXD2PA6NHM9 499 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 NFIBO00712 420 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 SGSM2O43147 1006 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 ADCY6O43306 1168 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 CST5P28325 142 aaPredicted RBP5.6□□□□□ -1.51
CLK3-219ENST00000567805 ACLYP53396 1101 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 GJA9P57773 515 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 MDM2Q00987 491 aaPredicted RBP5.6□□□□□ -1.51
CLK3-219ENST00000567805 TRDNQ13061 729 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 TRIM60Q495X7 471 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 IFIT1BQ5T764 474 aaKnown RBP5.6□□□□□ -1.51
CLK3-219ENST00000567805 NSMFQ6X4W1 530 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 TDHQ8IZJ6 230 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 PCSK9Q8NBP7 692 aaKnown RBP5.6□□□□□ -1.51
CLK3-219ENST00000567805 KLHDC9Q8NEP7 349 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 MORC4Q8TE76 937 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 FERMT2Q96AC1 680 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 LENG1Q96BZ8 264 aaPredicted RBP5.6□□□□□ -1.51
CLK3-219ENST00000567805 LBHD1Q9BQE6 289 aaPredicted RBP5.6□□□□□ -1.51
CLK3-219ENST00000567805 UBE2OQ9C0C9 1292 aaKnown RBP5.6□□□□□ -1.51
CLK3-219ENST00000567805 MAF1Q9H063 256 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 KATNBL1Q9H079 304 aa5.6□□□□□ -1.51
CLK3-219ENST00000567805 UPF3AQ9H1J1 476 aaKnown RBP5.6□□□□□ -1.51
CLK3-219ENST00000567805 ADD3Q9UEY8 706 aaKnown RBP5.6□□□□□ -1.51
CLK3-219ENST00000567805 CDH23Q9H251 3354 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 ELP1O95163 1332 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 ABCB11O95342 1321 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 MROH7Q68CQ1 1323 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 MYH7BA7E2Y1 1941 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.59□□□□□ -1.51
CLK3-219ENST00000567805 PTPDC1A2A3K4 754 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 B4DLN1 442 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 CYP21A2P08686 494 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 CLTBP09497 229 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 PARP1P09874 1014 aaKnown RBP5.59□□□□□ -1.51
CLK3-219ENST00000567805 C6orf222P0C671 652 aaPredicted RBP5.59□□□□□ -1.51
CLK3-219ENST00000567805 GOLGA8HP0CJ92 632 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 HOXB3P14651 431 aaPredicted RBP5.59□□□□□ -1.51
CLK3-219ENST00000567805 ALDH5A1P51649 535 aaPredicted RBP5.59□□□□□ -1.51
CLK3-219ENST00000567805 MRPL12P52815 198 aaKnown RBP5.59□□□□□ -1.51
CLK3-219ENST00000567805 NKX3-2P78367 333 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 TNFAIP2Q03169 654 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 PTH1RQ03431 593 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 BAATQ14032 418 aaPredicted RBP5.59□□□□□ -1.51
CLK3-219ENST00000567805 GSE1Q14687 1217 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 SART3Q15020 963 aaKnown RBP5.59□□□□□ -1.51
CLK3-219ENST00000567805 SEC23AQ15436 765 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 KCNA10Q16322 511 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 CDC37Q16543 378 aaPredicted RBP5.59□□□□□ -1.51
CLK3-219ENST00000567805 LRIT3Q3SXY7 679 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 IQSEC1Q6DN90 963 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 CCSAPQ6IQ19 270 aaPredicted RBP5.59□□□□□ -1.51
CLK3-219ENST00000567805 GPR153Q6NV75 609 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 RNF207Q6ZRF8 634 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 CENPQQ7L2Z9 268 aaPredicted RBP5.59□□□□□ -1.51
CLK3-219ENST00000567805 ANKRD33Q7Z3H0 272 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 RALYLQ86SE5 291 aaKnown RBP5.59□□□□□ -1.51
CLK3-219ENST00000567805 TLK2Q86UE8 772 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 ADGRF4Q8IZF3 695 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 RGS22Q8NE09 1264 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 DNERQ8NFT8 737 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 NCOA7Q8NI08 942 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 CLEC4DQ8WXI8 215 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 MAP4K1Q92918 833 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 RNF166Q96A37 237 aaPredicted RBP5.59□□□□□ -1.51
CLK3-219ENST00000567805 GLT1D1Q96MS3 346 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 TOX2Q96NM4 488 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 MPHOSPH6Q99547 160 aaKnown RBP5.59□□□□□ -1.51
CLK3-219ENST00000567805 VTA1Q9NP79 307 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 PRDM5Q9NQX1 630 aaPredicted RBP5.59□□□□□ -1.51
CLK3-219ENST00000567805 STARD7Q9NQZ5 370 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 PDLIM7Q9NR12 457 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 GNEQ9Y223 722 aaKnown RBP5.59□□□□□ -1.51
CLK3-219ENST00000567805 Q9Y3F1 56 aa5.59□□□□□ -1.51
CLK3-219ENST00000567805 ERICH2A1L162 156 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 TRIM43BA6NCK2 446 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 MYADML2A6NDP7 307 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 DCDC2CA8MYV0 355 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 E7EWF7 191 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 KIAA0355O15063 1070 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 ZEB2O60315 1214 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 PQBP1O60828 265 aaKnown RBP5.58□□□□□ -1.52
CLK3-219ENST00000567805 ASGR1P07306 291 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 CALML3P27482 149 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 RPS6P62753 249 aaKnown RBP5.58□□□□□ -1.52
CLK3-219ENST00000567805 TLE2Q04725 743 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 NBR1Q14596 966 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 FSCN1Q16658 493 aaKnown RBP5.58□□□□□ -1.52
CLK3-219ENST00000567805 USH1GQ495M9 461 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 GNASQ5JWF2 1037 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 TAPT1Q6NXT6 567 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms