RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 SLC38A10Q9HBR0 1119 aa16.55■□□□□ 0.24
SMG1-213ENST00000567737 NOD1Q9Y239 953 aa16.55■□□□□ 0.24
SMG1-213ENST00000567737 COG6Q9Y2V7 657 aa16.55■□□□□ 0.24
SMG1-213ENST00000567737 ZNF532Q9HCE3 1301 aa16.54■□□□□ 0.24
SMG1-213ENST00000567737 SOWAHBA6NEL2 793 aa16.54■□□□□ 0.24
SMG1-213ENST00000567737 F5H6K3 240 aa16.54■□□□□ 0.24
SMG1-213ENST00000567737 GJB5O95377 273 aa16.54■□□□□ 0.24
SMG1-213ENST00000567737 PDE6AP16499 860 aa16.54■□□□□ 0.24
SMG1-213ENST00000567737 DEFB103AP81534 67 aa16.54■□□□□ 0.24
SMG1-213ENST00000567737 PURAQ00577 322 aaKnown RBP16.54■□□□□ 0.24
SMG1-213ENST00000567737 KLRC3Q07444 240 aa16.54■□□□□ 0.24
SMG1-213ENST00000567737 SLFN5Q08AF3 891 aa16.54■□□□□ 0.24
SMG1-213ENST00000567737 PTPROQ16827 1216 aa16.54■□□□□ 0.24
SMG1-213ENST00000567737 IER5LQ5T953 404 aa16.54■□□□□ 0.24
SMG1-213ENST00000567737 TAPT1Q6NXT6 567 aa16.54■□□□□ 0.24
SMG1-213ENST00000567737 KIAA1211Q6ZU35 1233 aa16.54■□□□□ 0.24
SMG1-213ENST00000567737 FBXO16Q8IX29 292 aaPredicted RBP16.54■□□□□ 0.24
SMG1-213ENST00000567737 FBXO22Q8NEZ5 403 aa16.54■□□□□ 0.24
SMG1-213ENST00000567737 POP1Q99575 1024 aaKnown RBP16.54■□□□□ 0.24
SMG1-213ENST00000567737 MTG1Q9BT17 334 aaPredicted RBP16.54■□□□□ 0.24
SMG1-213ENST00000567737 ATP8A2Q9NTI2 1148 aa16.54■□□□□ 0.24
SMG1-213ENST00000567737 MUTYHQ9UIF7 546 aa16.54■□□□□ 0.24
SMG1-213ENST00000567737 USP34Q70CQ2 3546 aa16.53■□□□□ 0.24
SMG1-213ENST00000567737 TANC1Q9C0D5 1861 aa16.53■□□□□ 0.24
SMG1-213ENST00000567737 NDUFB10O96000 172 aa16.53■□□□□ 0.24
SMG1-213ENST00000567737 CPT1AP50416 773 aa16.53■□□□□ 0.24
SMG1-213ENST00000567737 TIGD5Q53EQ6 642 aa16.53■□□□□ 0.24
SMG1-213ENST00000567737 HERC4Q5GLZ8 1057 aaPredicted RBP16.53■□□□□ 0.24
SMG1-213ENST00000567737 C12orf60Q5U649 245 aa16.53■□□□□ 0.24
SMG1-213ENST00000567737 BMP8AQ7Z5Y6 402 aa16.53■□□□□ 0.24
SMG1-213ENST00000567737 SUGP1Q8IWZ8 645 aaKnown RBP16.53■□□□□ 0.24
SMG1-213ENST00000567737 EAF2Q96CJ1 260 aaPredicted RBP16.53■□□□□ 0.24
SMG1-213ENST00000567737 PABPC5Q96DU9 382 aaKnown RBP16.53■□□□□ 0.24
SMG1-213ENST00000567737 MRPL38Q96DV4 380 aaKnown RBP16.53■□□□□ 0.24
SMG1-213ENST00000567737 VTA1Q9NP79 307 aa16.53■□□□□ 0.24
SMG1-213ENST00000567737 A1CFQ9NQ94 594 aaKnown RBP16.53■□□□□ 0.24
SMG1-213ENST00000567737 CFAP54Q96N23 3096 aa16.53■□□□□ 0.24
SMG1-213ENST00000567737 CYP2D7A0A087X1C5 515 aa16.52■□□□□ 0.24
SMG1-213ENST00000567737 CT47B1P0C2W7 299 aaPredicted RBP16.52■□□□□ 0.24
SMG1-213ENST00000567737 TCF15Q12870 199 aa16.52■□□□□ 0.24
SMG1-213ENST00000567737 NBPF20Q3BBV1 942 aa16.52■□□□□ 0.24
SMG1-213ENST00000567737 TMEM63BQ5T3F8 832 aa16.52■□□□□ 0.24
SMG1-213ENST00000567737 NFRKBQ6P4R8 1299 aa16.52■□□□□ 0.24
SMG1-213ENST00000567737 CCDC155Q8N6L0 562 aa16.52■□□□□ 0.24
SMG1-213ENST00000567737 PBXIP1Q96AQ6 731 aa16.52■□□□□ 0.24
SMG1-213ENST00000567737 DDRGK1Q96HY6 314 aa16.52■□□□□ 0.24
SMG1-213ENST00000567737 ARMT1Q9H993 441 aa16.52■□□□□ 0.24
SMG1-213ENST00000567737 FEM1BQ9UK73 627 aa16.52■□□□□ 0.24
SMG1-213ENST00000567737 PRKAB2O43741 272 aa16.51■□□□□ 0.23
SMG1-213ENST00000567737 PTPN11Q06124 597 aaPredicted RBP16.51■□□□□ 0.23
SMG1-213ENST00000567737 PDAP1Q13442 181 aaKnown RBP16.51■□□□□ 0.23
SMG1-213ENST00000567737 DUSP28Q4G0W2 176 aa16.51■□□□□ 0.23
SMG1-213ENST00000567737 BRDTQ58F21 947 aaPredicted RBP16.51■□□□□ 0.23
SMG1-213ENST00000567737 CNKSR3Q6P9H4 555 aa16.51■□□□□ 0.23
SMG1-213ENST00000567737 BANK1Q8NDB2 785 aa16.51■□□□□ 0.23
SMG1-213ENST00000567737 ARHGAP45Q92619 1136 aa16.51■□□□□ 0.23
SMG1-213ENST00000567737 EDAQ92838 391 aa16.51■□□□□ 0.23
SMG1-213ENST00000567737 RNF146Q9NTX7 359 aa16.51■□□□□ 0.23
SMG1-213ENST00000567737 DDX49Q9Y6V7 483 aaKnown RBP16.51■□□□□ 0.23
SMG1-213ENST00000567737 SIP14410 1827 aa16.51■□□□□ 0.23
SMG1-213ENST00000567737 ABHD14A-ACY1A0A1B0GW23 586 aa16.5■□□□□ 0.23
SMG1-213ENST00000567737 FDX1P10109 184 aa16.5■□□□□ 0.23
SMG1-213ENST00000567737 FAM117BQ6P1L5 589 aa16.5■□□□□ 0.23
SMG1-213ENST00000567737 RNF135Q8IUD6 432 aa16.5■□□□□ 0.23
SMG1-213ENST00000567737 HS6ST3Q8IZP7 471 aa16.5■□□□□ 0.23
SMG1-213ENST00000567737 CAGE1Q8TC20 777 aa16.5■□□□□ 0.23
SMG1-213ENST00000567737 SSH3Q8TE77 659 aa16.5■□□□□ 0.23
SMG1-213ENST00000567737 AFAP1L1Q8TED9 768 aa16.5■□□□□ 0.23
SMG1-213ENST00000567737 C17orf80Q9BSJ5 609 aa16.5■□□□□ 0.23
SMG1-213ENST00000567737 IRF2BPLQ9H1B7 796 aa16.5■□□□□ 0.23
SMG1-213ENST00000567737 FAM86C1Q9NVL1 165 aa16.5■□□□□ 0.23
SMG1-213ENST00000567737 CLDND1Q9NY35 253 aa16.5■□□□□ 0.23
SMG1-213ENST00000567737 NYAP2Q9P242 653 aa16.5■□□□□ 0.23
SMG1-213ENST00000567737 PTPRSQ13332 1948 aa16.5■□□□□ 0.23
SMG1-213ENST00000567737 TMEM221A6NGB7 291 aa16.49■□□□□ 0.23
SMG1-213ENST00000567737 M0R296 226 aa16.49■□□□□ 0.23
SMG1-213ENST00000567737 EFCAB14O75071 495 aa16.49■□□□□ 0.23
SMG1-213ENST00000567737 PARNO95453 639 aaKnown RBP16.49■□□□□ 0.23
SMG1-213ENST00000567737 PLCB2Q00722 1185 aa16.49■□□□□ 0.23
SMG1-213ENST00000567737 TCEAL5Q5H9L2 206 aa16.49■□□□□ 0.23
SMG1-213ENST00000567737 OR6J1Q8NGC5 347 aa16.49■□□□□ 0.23
SMG1-213ENST00000567737 PPP1R13LQ8WUF5 828 aa16.49■□□□□ 0.23
SMG1-213ENST00000567737 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMG1-213ENST00000567737 RAD50Q92878 1312 aa16.48■□□□□ 0.23
SMG1-213ENST00000567737 TET1Q8NFU7 2136 aa16.48■□□□□ 0.23
SMG1-213ENST00000567737 ZDBF2Q9HCK1 2354 aa16.48■□□□□ 0.23
SMG1-213ENST00000567737 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.48■□□□□ 0.23
SMG1-213ENST00000567737 TCRBV5S4A2TA0A5A2 114 aa16.48■□□□□ 0.23
SMG1-213ENST00000567737 BCAR3O75815 825 aa16.48■□□□□ 0.23
SMG1-213ENST00000567737 MBD4O95243 580 aa16.48■□□□□ 0.23
SMG1-213ENST00000567737 TKFCQ3LXA3 575 aa16.48■□□□□ 0.23
SMG1-213ENST00000567737 TRIM67Q6ZTA4 783 aa16.48■□□□□ 0.23
SMG1-213ENST00000567737 LRRC8DQ7L1W4 858 aa16.48■□□□□ 0.23
SMG1-213ENST00000567737 ERMP1Q7Z2K6 904 aa16.48■□□□□ 0.23
SMG1-213ENST00000567737 ATOH1Q92858 354 aaPredicted RBP16.48■□□□□ 0.23
SMG1-213ENST00000567737 ZFP91Q96JP5 570 aaPredicted RBP16.48■□□□□ 0.23
SMG1-213ENST00000567737 WDR11Q9BZH6 1224 aa16.48■□□□□ 0.23
SMG1-213ENST00000567737 NOP58Q9Y2X3 529 aaKnown RBP16.48■□□□□ 0.23
SMG1-213ENST00000567737 INSL6Q9Y581 213 aa16.48■□□□□ 0.23
SMG1-213ENST00000567737 ANP32CO43423 234 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms