RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 SYNGAP1Q96PV0 1343 aa19.92■□□□□ 0.78
COMMD4-220ENST00000567720 CALML3P27482 149 aa19.91■□□□□ 0.78
COMMD4-220ENST00000567720 NEK4P51957 841 aa19.91■□□□□ 0.78
COMMD4-220ENST00000567720 CCT2P78371 535 aaKnown RBP19.91■□□□□ 0.78
COMMD4-220ENST00000567720 GHRHRQ02643 423 aa19.91■□□□□ 0.78
COMMD4-220ENST00000567720 PPP2R5BQ15173 497 aa19.91■□□□□ 0.78
COMMD4-220ENST00000567720 NTRK3Q16288 839 aa19.91■□□□□ 0.78
COMMD4-220ENST00000567720 MAMDC4Q6UXC1 1216 aa19.91■□□□□ 0.78
COMMD4-220ENST00000567720 SHISA4Q96DD7 197 aa19.91■□□□□ 0.78
COMMD4-220ENST00000567720 ZNF274Q96GC6 653 aaPredicted RBP19.91■□□□□ 0.78
COMMD4-220ENST00000567720 BACH2Q9BYV9 841 aa19.91■□□□□ 0.78
COMMD4-220ENST00000567720 RNF208Q9H0X6 261 aa19.91■□□□□ 0.78
COMMD4-220ENST00000567720 COL20A1Q9P218 1284 aa19.91■□□□□ 0.78
COMMD4-220ENST00000567720 TPCN1Q9ULQ1 816 aa19.91■□□□□ 0.78
COMMD4-220ENST00000567720 CCDC196A0A1B0GTZ2 297 aa19.9■□□□□ 0.78
COMMD4-220ENST00000567720 LARGE1O95461 756 aa19.9■□□□□ 0.78
COMMD4-220ENST00000567720 HSD17B4P51659 736 aa19.9■□□□□ 0.78
COMMD4-220ENST00000567720 STK3Q13188 491 aa19.9■□□□□ 0.78
COMMD4-220ENST00000567720 NOL8Q76FK4 1167 aaKnown RBP19.9■□□□□ 0.78
COMMD4-220ENST00000567720 ARMCX2Q7L311 632 aa19.9■□□□□ 0.78
COMMD4-220ENST00000567720 MSL3Q8N5Y2 521 aaKnown RBP19.9■□□□□ 0.78
COMMD4-220ENST00000567720 RGS22Q8NE09 1264 aa19.9■□□□□ 0.78
COMMD4-220ENST00000567720 GPKOWQ92917 476 aaPredicted RBP eCLIP19.9■□□□□ 0.78
COMMD4-220ENST00000567720 TBC1D32Q96NH3 1257 aa19.9■□□□□ 0.78
COMMD4-220ENST00000567720 UPF2Q9HAU5 1272 aaKnown RBP19.9■□□□□ 0.78
COMMD4-220ENST00000567720 HMX1Q9NP08 348 aaPredicted RBP19.9■□□□□ 0.78
COMMD4-220ENST00000567720 TNRC18O15417 2968 aaPredicted RBP19.89■□□□□ 0.77
COMMD4-220ENST00000567720 CFBP00751 764 aa19.89■□□□□ 0.77
COMMD4-220ENST00000567720 ALDH5A1P51649 535 aaPredicted RBP19.89■□□□□ 0.77
COMMD4-220ENST00000567720 WWC2Q6AWC2 1192 aa19.89■□□□□ 0.77
COMMD4-220ENST00000567720 MCF2L2Q86YR7 1114 aa19.89■□□□□ 0.77
COMMD4-220ENST00000567720 SYTL5Q8TDW5 730 aaPredicted RBP19.89■□□□□ 0.77
COMMD4-220ENST00000567720 PHKBQ93100 1093 aa19.89■□□□□ 0.77
COMMD4-220ENST00000567720 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.89■□□□□ 0.77
COMMD4-220ENST00000567720 ALPK3Q96L96 1907 aa19.88■□□□□ 0.77
COMMD4-220ENST00000567720 PPFIA3O75145 1194 aa19.88■□□□□ 0.77
COMMD4-220ENST00000567720 SNAI1O95863 264 aaPredicted RBP19.88■□□□□ 0.77
COMMD4-220ENST00000567720 GJB1P08034 283 aa19.88■□□□□ 0.77
COMMD4-220ENST00000567720 SCRN1Q12765 414 aa19.88■□□□□ 0.77
COMMD4-220ENST00000567720 TRAF1Q13077 416 aa19.88■□□□□ 0.77
COMMD4-220ENST00000567720 ANKRD1Q15327 319 aa19.88■□□□□ 0.77
COMMD4-220ENST00000567720 PRAMEF19Q5SWL8 479 aa19.88■□□□□ 0.77
COMMD4-220ENST00000567720 TYW1BQ6NUM6 668 aa19.88■□□□□ 0.77
COMMD4-220ENST00000567720 HEATR3Q7Z4Q2 680 aa19.88■□□□□ 0.77
COMMD4-220ENST00000567720 DEFB118Q96PH6 123 aa19.88■□□□□ 0.77
COMMD4-220ENST00000567720 TMEM106CQ9BVX2 250 aa19.88■□□□□ 0.77
COMMD4-220ENST00000567720 MAF1Q9H063 256 aa19.88■□□□□ 0.77
COMMD4-220ENST00000567720 KATNBL1Q9H079 304 aa19.88■□□□□ 0.77
COMMD4-220ENST00000567720 ZNF865P0CJ78 1059 aaPredicted RBP19.87■□□□□ 0.77
COMMD4-220ENST00000567720 IFNAR1P17181 557 aa19.87■□□□□ 0.77
COMMD4-220ENST00000567720 HOXA13P31271 388 aaPredicted RBP19.87■□□□□ 0.77
COMMD4-220ENST00000567720 MORC4Q8TE76 937 aa19.87■□□□□ 0.77
COMMD4-220ENST00000567720 U2AF1L4Q8WU68 220 aaKnown RBP19.87■□□□□ 0.77
COMMD4-220ENST00000567720 NRBP1Q9UHY1 535 aa19.87■□□□□ 0.77
COMMD4-220ENST00000567720 V9GY48 417 aaPredicted RBP19.87■□□□□ 0.77
COMMD4-220ENST00000567720 DOCK5Q9H7D0 1870 aa19.86■□□□□ 0.77
COMMD4-220ENST00000567720 PFKFB2O60825 505 aa19.86■□□□□ 0.77
COMMD4-220ENST00000567720 EDNRBP24530 442 aa19.86■□□□□ 0.77
COMMD4-220ENST00000567720 GJA8P48165 433 aa19.86■□□□□ 0.77
COMMD4-220ENST00000567720 ME3Q16798 604 aa19.86■□□□□ 0.77
COMMD4-220ENST00000567720 RNF26Q9BY78 433 aaPredicted RBP19.86■□□□□ 0.77
COMMD4-220ENST00000567720 ADD3Q9UEY8 706 aaKnown RBP19.86■□□□□ 0.77
COMMD4-220ENST00000567720 ZHX1Q9UKY1 873 aaPredicted RBP19.86■□□□□ 0.77
COMMD4-220ENST00000567720 MYH7BA7E2Y1 1941 aa19.86■□□□□ 0.77
COMMD4-220ENST00000567720 ASB14A6NK59 587 aa19.85■□□□□ 0.77
COMMD4-220ENST00000567720 STXBP3O00186 592 aa19.85■□□□□ 0.77
COMMD4-220ENST00000567720 EN2P19622 333 aaPredicted RBP19.85■□□□□ 0.77
COMMD4-220ENST00000567720 ST3GAL1Q11201 340 aa19.85■□□□□ 0.77
COMMD4-220ENST00000567720 PKN1Q16512 942 aa19.85■□□□□ 0.77
COMMD4-220ENST00000567720 PFKFB3Q16875 520 aaPredicted RBP19.85■□□□□ 0.77
COMMD4-220ENST00000567720 PPP1R18Q6NYC8 613 aa19.85■□□□□ 0.77
COMMD4-220ENST00000567720 FBXO16Q8IX29 292 aaPredicted RBP19.85■□□□□ 0.77
COMMD4-220ENST00000567720 DNERQ8NFT8 737 aa19.85■□□□□ 0.77
COMMD4-220ENST00000567720 LENG1Q96BZ8 264 aaPredicted RBP19.85■□□□□ 0.77
COMMD4-220ENST00000567720 TAAR1Q96RJ0 339 aa19.85■□□□□ 0.77
COMMD4-220ENST00000567720 SLC26A6Q9BXS9 759 aa19.85■□□□□ 0.77
COMMD4-220ENST00000567720 CRISPLD2Q9H0B8 497 aa19.85■□□□□ 0.77
COMMD4-220ENST00000567720 DDX20Q9UHI6 824 aaKnown RBP19.85■□□□□ 0.77
COMMD4-220ENST00000567720 CNPY2Q9Y2B0 182 aa19.85■□□□□ 0.77
COMMD4-220ENST00000567720 FRMPD4Q14CM0 1322 aa19.84■□□□□ 0.77
COMMD4-220ENST00000567720 LOC102724159A0A0B4J2E5 919 aa19.84■□□□□ 0.77
COMMD4-220ENST00000567720 hCG_1984214I3L0E3 225 aa19.84■□□□□ 0.77
COMMD4-220ENST00000567720 SEPT4O43236 478 aa19.84■□□□□ 0.77
COMMD4-220ENST00000567720 ADCY6O43306 1168 aa19.84■□□□□ 0.77
COMMD4-220ENST00000567720 PRPF3O43395 683 aaKnown RBP19.84■□□□□ 0.77
COMMD4-220ENST00000567720 SCG2P13521 617 aa19.84■□□□□ 0.77
COMMD4-220ENST00000567720 CNGA1P29973 690 aa19.84■□□□□ 0.77
COMMD4-220ENST00000567720 PWP2Q15269 919 aaKnown RBP19.84■□□□□ 0.77
COMMD4-220ENST00000567720 RABEP1Q15276 862 aa19.84■□□□□ 0.77
COMMD4-220ENST00000567720 LHX8Q68G74 356 aa19.84■□□□□ 0.77
COMMD4-220ENST00000567720 ZNF713Q8N859 430 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-220ENST00000567720 GTF3C6Q969F1 213 aa19.84■□□□□ 0.77
COMMD4-220ENST00000567720 SLKQ9H2G2 1235 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-220ENST00000567720 ABHD16BQ9H3Z7 469 aa19.84■□□□□ 0.77
COMMD4-220ENST00000567720 BARHL2Q9NY43 387 aa19.84■□□□□ 0.77
COMMD4-220ENST00000567720 DNAH12Q6ZR08 3092 aa19.83■□□□□ 0.77
COMMD4-220ENST00000567720 GCOM1H8Y6P7 765 aaPredicted RBP19.83■□□□□ 0.77
COMMD4-220ENST00000567720 MEIS2O14770 477 aa19.83■□□□□ 0.77
COMMD4-220ENST00000567720 CPLX1O14810 134 aa19.83■□□□□ 0.77
COMMD4-220ENST00000567720 SGPL1O95470 568 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms