RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 MAP4K1Q92918 833 aa21.88■■□□□ 1.09
IFT140-208ENST00000566818 VTI1AQ96AJ9 217 aa21.88■■□□□ 1.09
IFT140-208ENST00000566818 TOX2Q96NM4 488 aa21.88■■□□□ 1.09
IFT140-208ENST00000566818 GNEQ9Y223 722 aaKnown RBP21.88■■□□□ 1.09
IFT140-208ENST00000566818 Q9Y3F1 56 aa21.88■■□□□ 1.09
IFT140-208ENST00000566818 RBM8AQ9Y5S9 174 aaKnown RBP21.88■■□□□ 1.09
IFT140-208ENST00000566818 SOX1O00570 391 aaPredicted RBP21.87■■□□□ 1.09
IFT140-208ENST00000566818 SMPD1P17405 629 aa21.87■■□□□ 1.09
IFT140-208ENST00000566818 WTAPQ15007 396 aa21.87■■□□□ 1.09
IFT140-208ENST00000566818 QRICH1Q2TAL8 776 aa21.87■■□□□ 1.09
IFT140-208ENST00000566818 TAPT1Q6NXT6 567 aa21.87■■□□□ 1.09
IFT140-208ENST00000566818 ANKRD33Q7Z3H0 272 aa21.87■■□□□ 1.09
IFT140-208ENST00000566818 FBXO11Q86XK2 927 aa21.87■■□□□ 1.09
IFT140-208ENST00000566818 MCF2L2Q86YR7 1114 aa21.87■■□□□ 1.09
IFT140-208ENST00000566818 MRPL11Q9Y3B7 192 aaKnown RBP21.87■■□□□ 1.09
IFT140-208ENST00000566818 DDX49Q9Y6V7 483 aaKnown RBP21.87■■□□□ 1.09
IFT140-208ENST00000566818 KLRF2D3W0D1 207 aa21.86■■□□□ 1.09
IFT140-208ENST00000566818 CABYRO75952 493 aa21.86■■□□□ 1.09
IFT140-208ENST00000566818 FSCN1Q16658 493 aaKnown RBP21.86■■□□□ 1.09
IFT140-208ENST00000566818 JMJD4Q9H9V9 463 aa21.86■■□□□ 1.09
IFT140-208ENST00000566818 VAT1LQ9HCJ6 419 aa21.86■■□□□ 1.09
IFT140-208ENST00000566818 PDGFCQ9NRA1 345 aa21.86■■□□□ 1.09
IFT140-208ENST00000566818 MYH6P13533 1939 aa21.85■■□□□ 1.09
IFT140-208ENST00000566818 TRIM43BA6NCK2 446 aa21.85■■□□□ 1.09
IFT140-208ENST00000566818 KIAA0355O15063 1070 aa21.85■■□□□ 1.09
IFT140-208ENST00000566818 DYNC1LI2O43237 492 aaPredicted RBP21.85■■□□□ 1.09
IFT140-208ENST00000566818 IRX5P78411 483 aaPredicted RBP21.85■■□□□ 1.09
IFT140-208ENST00000566818 BEX3Q00994 111 aa21.85■■□□□ 1.09
IFT140-208ENST00000566818 DUSP28Q4G0W2 176 aa21.85■■□□□ 1.09
IFT140-208ENST00000566818 BMP2KLQ5H9B9 411 aa21.85■■□□□ 1.09
IFT140-208ENST00000566818 SH3RF1Q7Z6J0 888 aa21.85■■□□□ 1.09
IFT140-208ENST00000566818 BADQ92934 168 aa21.85■■□□□ 1.09
IFT140-208ENST00000566818 TRIM43Q96BQ3 446 aaPredicted RBP21.85■■□□□ 1.09
IFT140-208ENST00000566818 LRCH3Q96II8 777 aa21.85■■□□□ 1.09
IFT140-208ENST00000566818 AMNQ9BXJ7 453 aa21.85■■□□□ 1.09
IFT140-208ENST00000566818 TMEM39AQ9NV64 488 aa21.85■■□□□ 1.09
IFT140-208ENST00000566818 CTAGE5O15320 804 aa21.84■■□□□ 1.09
IFT140-208ENST00000566818 TLR3O15455 904 aaKnown RBP21.84■■□□□ 1.09
IFT140-208ENST00000566818 RAG1P15918 1043 aa21.84■■□□□ 1.09
IFT140-208ENST00000566818 EDNRBP24530 442 aa21.84■■□□□ 1.09
IFT140-208ENST00000566818 TRAF1Q13077 416 aa21.84■■□□□ 1.09
IFT140-208ENST00000566818 GRM4Q14833 912 aa21.84■■□□□ 1.09
IFT140-208ENST00000566818 TMEM67Q5HYA8 995 aa21.84■■□□□ 1.09
IFT140-208ENST00000566818 GPR153Q6NV75 609 aa21.84■■□□□ 1.09
IFT140-208ENST00000566818 CATIPQ7Z7H3 387 aa21.84■■□□□ 1.09
IFT140-208ENST00000566818 STAG2Q8N3U4 1231 aa21.84■■□□□ 1.09
IFT140-208ENST00000566818 ESYT1Q9BSJ8 1104 aa21.84■■□□□ 1.09
IFT140-208ENST00000566818 WDR11Q9BZH6 1224 aa21.84■■□□□ 1.09
IFT140-208ENST00000566818 MAD2L2Q9UI95 211 aa21.84■■□□□ 1.09
IFT140-208ENST00000566818 TAF6LQ9Y6J9 622 aa21.84■■□□□ 1.09
IFT140-208ENST00000566818 PALM3A6NDB9 673 aaPredicted RBP21.83■■□□□ 1.09
IFT140-208ENST00000566818 ARVCFO00192 962 aa21.83■■□□□ 1.09
IFT140-208ENST00000566818 PPP2R5BQ15173 497 aa21.83■■□□□ 1.09
IFT140-208ENST00000566818 STOX1Q6ZVD7 989 aa21.83■■□□□ 1.09
IFT140-208ENST00000566818 MB21D2Q8IYB1 491 aaPredicted RBP21.83■■□□□ 1.09
IFT140-208ENST00000566818 SEZ6LQ9BYH1 1024 aa21.83■■□□□ 1.09
IFT140-208ENST00000566818 RBM47A0AV96 593 aaKnown RBP21.82■■□□□ 1.08
IFT140-208ENST00000566818 ZBTB5O15062 677 aa21.82■■□□□ 1.08
IFT140-208ENST00000566818 NKRFO15226 690 aaKnown RBP eCLIP21.82■■□□□ 1.08
IFT140-208ENST00000566818 FAAP100Q0VG06 881 aa21.82■■□□□ 1.08
IFT140-208ENST00000566818 BRDTQ58F21 947 aaPredicted RBP21.82■■□□□ 1.08
IFT140-208ENST00000566818 CASC1Q6TDU7 716 aa21.82■■□□□ 1.08
IFT140-208ENST00000566818 SCFD2Q8WU76 684 aa21.82■■□□□ 1.08
IFT140-208ENST00000566818 LSG1Q9H089 658 aaKnown RBP21.82■■□□□ 1.08
IFT140-208ENST00000566818 ANO2Q9NQ90 1003 aa21.82■■□□□ 1.08
IFT140-208ENST00000566818 CPT1AP50416 773 aa21.81■■□□□ 1.08
IFT140-208ENST00000566818 CDK7P50613 346 aa21.81■■□□□ 1.08
IFT140-208ENST00000566818 CXCL17Q6UXB2 119 aa21.81■■□□□ 1.08
IFT140-208ENST00000566818 CHST3Q7LGC8 479 aa21.81■■□□□ 1.08
IFT140-208ENST00000566818 OR6J1Q8NGC5 347 aa21.81■■□□□ 1.08
IFT140-208ENST00000566818 SYTL5Q8TDW5 730 aaPredicted RBP21.81■■□□□ 1.08
IFT140-208ENST00000566818 NSUN6Q8TEA1 469 aaKnown RBP21.81■■□□□ 1.08
IFT140-208ENST00000566818 MTA3Q9BTC8 594 aa21.81■■□□□ 1.08
IFT140-208ENST00000566818 LAMA3Q16787 3333 aa21.8■■□□□ 1.08
IFT140-208ENST00000566818 ANTXR2P58335 489 aa21.8■■□□□ 1.08
IFT140-208ENST00000566818 FPGSQ05932 587 aa21.8■■□□□ 1.08
IFT140-208ENST00000566818 MTMR8Q96EF0 704 aa21.8■■□□□ 1.08
IFT140-208ENST00000566818 POLR3EQ9NVU0 708 aa21.8■■□□□ 1.08
IFT140-208ENST00000566818 CFBP00751 764 aa21.79■■□□□ 1.08
IFT140-208ENST00000566818 MCM5P33992 734 aa21.79■■□□□ 1.08
IFT140-208ENST00000566818 TROAPQ12815 778 aa21.79■■□□□ 1.08
IFT140-208ENST00000566818 TTLL4Q14679 1199 aa21.79■■□□□ 1.08
IFT140-208ENST00000566818 HOMER1Q86YM7 354 aa21.79■■□□□ 1.08
IFT140-208ENST00000566818 IWS1Q96ST2 819 aa21.79■■□□□ 1.08
IFT140-208ENST00000566818 RMDN3Q96TC7 470 aa21.79■■□□□ 1.08
IFT140-208ENST00000566818 TBX21Q9UL17 535 aa21.79■■□□□ 1.08
IFT140-208ENST00000566818 PCDHA1Q9Y5I3 950 aa21.79■■□□□ 1.08
IFT140-208ENST00000566818 SZT2Q5T011 3432 aa21.78■■□□□ 1.08
IFT140-208ENST00000566818 SLC27A2O14975 620 aa21.78■■□□□ 1.08
IFT140-208ENST00000566818 PRC1O43663 620 aa21.78■■□□□ 1.08
IFT140-208ENST00000566818 DDAH1O94760 285 aa21.78■■□□□ 1.08
IFT140-208ENST00000566818 PTGS1P23219 599 aa21.78■■□□□ 1.08
IFT140-208ENST00000566818 KIF5BP33176 963 aa21.78■■□□□ 1.08
IFT140-208ENST00000566818 ITGA7Q13683 1181 aa21.78■■□□□ 1.08
IFT140-208ENST00000566818 TMEM63BQ5T3F8 832 aa21.78■■□□□ 1.08
IFT140-208ENST00000566818 ARHGEF16Q5VV41 709 aa21.78■■□□□ 1.08
IFT140-208ENST00000566818 FAM126BQ8IXS8 530 aa21.78■■□□□ 1.08
IFT140-208ENST00000566818 SAMD3Q8N6K7 520 aa21.78■■□□□ 1.08
IFT140-208ENST00000566818 SLC43A3Q8NBI5 491 aa21.78■■□□□ 1.08
IFT140-208ENST00000566818 CTCFLQ8NI51 663 aaPredicted RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms