RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 FBXO16Q8IX29 292 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 FGD4Q96M96 766 aa11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 VAT1LQ9HCJ6 419 aa11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 ZSWIM5Q9P217 1185 aa11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 FAM184BQ9ULE4 1060 aa11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 MYH7BA7E2Y1 1941 aa11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 KIAA1217Q5T5P2 1943 aa11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 PLA2G6O60733 806 aa11.82□□□□□ -0.52
GTF3C1-206ENST00000566779 IGHA2P01877 340 aa11.82□□□□□ -0.52
GTF3C1-206ENST00000566779 PARP1P09874 1014 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-206ENST00000566779 NOVP48745 357 aa11.82□□□□□ -0.52
GTF3C1-206ENST00000566779 BAATQ14032 418 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-206ENST00000566779 CCDC144BQ3MJ40 725 aa11.82□□□□□ -0.52
GTF3C1-206ENST00000566779 CCDC178Q5BJE1 867 aa11.82□□□□□ -0.52
GTF3C1-206ENST00000566779 CYB5R4Q7L1T6 521 aa11.82□□□□□ -0.52
GTF3C1-206ENST00000566779 CENPQQ7L2Z9 268 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-206ENST00000566779 DGKHQ86XP1 1220 aa11.82□□□□□ -0.52
GTF3C1-206ENST00000566779 VTI1AQ96AJ9 217 aa11.82□□□□□ -0.52
GTF3C1-206ENST00000566779 TTC14Q96N46 770 aa11.82□□□□□ -0.52
GTF3C1-206ENST00000566779 UBE2OQ9C0C9 1292 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-206ENST00000566779 CYP39A1Q9NYL5 469 aa11.82□□□□□ -0.52
GTF3C1-206ENST00000566779 NRBP1Q9UHY1 535 aa11.82□□□□□ -0.52
GTF3C1-206ENST00000566779 TAF6LQ9Y6J9 622 aa11.82□□□□□ -0.52
GTF3C1-206ENST00000566779 ERICH2A1L162 156 aa11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 MYADML2A6NDP7 307 aa11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 SOWAHBA6NEL2 793 aa11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 ASB14A6NK59 587 aa11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 IFIT3O14879 490 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 SGSM2O43147 1006 aa11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 PQBP1O60828 265 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 NEFLP07196 543 aa11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 CYP21A2P08686 494 aa11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 PTGS1P23219 599 aa11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 FXR1P51114 621 aaKnown RBP eCLIP11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 GPATCH4Q5T3I0 446 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 BTNL9Q6UXG8 535 aa11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 MSL3Q8N5Y2 521 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 FAM133AQ8N9E0 248 aa11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 CCDC136Q96JN2 1154 aa11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 LBHD1Q9BQE6 289 aaPredicted RBP11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 ABHD16BQ9H3Z7 469 aa11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 SPC25Q9HBM1 224 aa11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 ANO2Q9NQ90 1003 aa11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 RBM8AQ9Y5S9 174 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-206ENST00000566779 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 A0A1W2PQ45 241 aaPredicted RBP11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 A0A1W2PQY0 241 aa11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 ADCY6O43306 1168 aa11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 BEX3Q00994 111 aa11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 WTAPQ15007 396 aa11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 ASPRV1Q53RT3 343 aa11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 MAMDC4Q6UXC1 1216 aa11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 SLC39A5Q6ZMH5 540 aa11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 RNF207Q6ZRF8 634 aa11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 STOX1Q6ZVD7 989 aa11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 HOMER1Q86YM7 354 aa11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 ADGRF4Q8IZF3 695 aa11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 NCOA7Q8NI08 942 aa11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 PIBF1Q8WXW3 757 aa11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 STARD7Q9NQZ5 370 aa11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 DOCK5Q9H7D0 1870 aa11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 ASTN1O14525 1302 aa11.8□□□□□ -0.52
GTF3C1-206ENST00000566779 E7EWF7 191 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 GPR37O15354 613 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 ADAMTS4O75173 837 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 SNHG28P0DPA3 235 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 ALDH5A1P51649 535 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 ACLYP53396 1101 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 TNFAIP2Q03169 654 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 SART3Q15020 963 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 KCNA10Q16322 511 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 QRICH1Q2TAL8 776 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 TMEM67Q5HYA8 995 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 GNASQ5JWF2 1037 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 TLK2Q86UE8 772 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 NUP133Q8WUM0 1156 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 ESYT1Q9BSJ8 1104 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 AP5M1Q9H0R1 490 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 SENP2Q9HC62 589 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 PDGFCQ9NRA1 345 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 ADD3Q9UEY8 706 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 PHF24Q9UPV7 400 aa11.79□□□□□ -0.52
GTF3C1-206ENST00000566779 DUSP11O75319 330 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-206ENST00000566779 RPS6P62753 249 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-206ENST00000566779 TLE2Q04725 743 aa11.78□□□□□ -0.52
GTF3C1-206ENST00000566779 PDE4DQ08499 809 aa11.78□□□□□ -0.52
GTF3C1-206ENST00000566779 NFXL1Q6ZNB6 911 aa11.78□□□□□ -0.52
GTF3C1-206ENST00000566779 RAB11FIP4Q86YS3 637 aa11.78□□□□□ -0.52
GTF3C1-206ENST00000566779 STAG2Q8N3U4 1231 aa11.78□□□□□ -0.52
GTF3C1-206ENST00000566779 CLEC4DQ8WXI8 215 aa11.78□□□□□ -0.52
GTF3C1-206ENST00000566779 MYL10Q9BUA6 226 aa11.78□□□□□ -0.52
GTF3C1-206ENST00000566779 ABCB11O95342 1321 aa11.78□□□□□ -0.52
GTF3C1-206ENST00000566779 WDR19Q8NEZ3 1342 aa11.78□□□□□ -0.52
GTF3C1-206ENST00000566779 KLRF2D3W0D1 207 aa11.77□□□□□ -0.53
GTF3C1-206ENST00000566779 DYNC1LI2O43237 492 aaPredicted RBP11.77□□□□□ -0.53
GTF3C1-206ENST00000566779 ASGR1P07306 291 aa11.77□□□□□ -0.53
GTF3C1-206ENST00000566779 NT5C2P49902 561 aa11.77□□□□□ -0.53
GTF3C1-206ENST00000566779 CHMP4BP1P59074 171 aa11.77□□□□□ -0.53
GTF3C1-206ENST00000566779 SEC23AQ15436 765 aa11.77□□□□□ -0.53
GTF3C1-206ENST00000566779 CASC1Q6TDU7 716 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms