RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 MCM3APO60318 1980 aa17.6■□□□□ 0.41
RNF40-209ENST00000566703 PTPDC1A2A3K4 754 aa17.6■□□□□ 0.41
RNF40-209ENST00000566703 B4DLN1 442 aa17.6■□□□□ 0.41
RNF40-209ENST00000566703 CSF2RAP15509 400 aa17.6■□□□□ 0.41
RNF40-209ENST00000566703 MRPL12P52815 198 aaKnown RBP17.6■□□□□ 0.41
RNF40-209ENST00000566703 B4GALNT3Q6L9W6 998 aa17.6■□□□□ 0.41
RNF40-209ENST00000566703 RNF207Q6ZRF8 634 aa17.6■□□□□ 0.41
RNF40-209ENST00000566703 IQCA1Q86XH1 822 aa17.6■□□□□ 0.41
RNF40-209ENST00000566703 TBC1D10CQ8IV04 446 aa17.6■□□□□ 0.41
RNF40-209ENST00000566703 DNERQ8NFT8 737 aa17.6■□□□□ 0.41
RNF40-209ENST00000566703 WDR11Q9BZH6 1224 aa17.6■□□□□ 0.41
RNF40-209ENST00000566703 IL23AQ9NPF7 189 aa17.6■□□□□ 0.41
RNF40-209ENST00000566703 POLR3EQ9NVU0 708 aa17.6■□□□□ 0.41
RNF40-209ENST00000566703 GRIN2DO15399 1336 aa17.6■□□□□ 0.41
RNF40-209ENST00000566703 NKRFO15226 690 aaKnown RBP eCLIP17.59■□□□□ 0.41
RNF40-209ENST00000566703 IGHDP01880 384 aa17.59■□□□□ 0.41
RNF40-209ENST00000566703 DNAJB2P25686 324 aa17.59■□□□□ 0.41
RNF40-209ENST00000566703 ZNF365Q70YC5 407 aa17.59■□□□□ 0.41
RNF40-209ENST00000566703 MAFAQ8NHW3 353 aaPredicted RBP17.59■□□□□ 0.41
RNF40-209ENST00000566703 MYLIPQ8WY64 445 aa17.59■□□□□ 0.41
RNF40-209ENST00000566703 PPP1R12CQ9BZL4 782 aa17.59■□□□□ 0.41
RNF40-209ENST00000566703 MTIF3Q9H2K0 278 aaKnown RBP17.59■□□□□ 0.41
RNF40-209ENST00000566703 HIPK3Q9H422 1215 aa17.59■□□□□ 0.41
RNF40-209ENST00000566703 DIAPH3Q9NSV4 1193 aa17.59■□□□□ 0.41
RNF40-209ENST00000566703 DDX49Q9Y6V7 483 aaKnown RBP17.59■□□□□ 0.41
RNF40-209ENST00000566703 DNAH12Q6ZR08 3092 aa17.59■□□□□ 0.41
RNF40-209ENST00000566703 KPNA6O60684 536 aa17.58■□□□□ 0.4
RNF40-209ENST00000566703 SUPT20HL2P0C7V6 817 aa17.58■□□□□ 0.4
RNF40-209ENST00000566703 EDNRBP24530 442 aa17.58■□□□□ 0.4
RNF40-209ENST00000566703 CALML3P27482 149 aa17.58■□□□□ 0.4
RNF40-209ENST00000566703 CYP2C18P33260 490 aa17.58■□□□□ 0.4
RNF40-209ENST00000566703 CPT1AP50416 773 aa17.58■□□□□ 0.4
RNF40-209ENST00000566703 RPS6P62753 249 aaKnown RBP17.58■□□□□ 0.4
RNF40-209ENST00000566703 TMEM63BQ5T3F8 832 aa17.58■□□□□ 0.4
RNF40-209ENST00000566703 HERVK_113Q902F9 699 aa17.58■□□□□ 0.4
RNF40-209ENST00000566703 DSCC1Q9BVC3 393 aa17.58■□□□□ 0.4
RNF40-209ENST00000566703 CTNNA3Q9UI47 895 aa17.58■□□□□ 0.4
RNF40-209ENST00000566703 FGBP02675 491 aa17.57■□□□□ 0.4
RNF40-209ENST00000566703 FOSL2P15408 326 aa17.57■□□□□ 0.4
RNF40-209ENST00000566703 PDE4DQ08499 809 aa17.57■□□□□ 0.4
RNF40-209ENST00000566703 BRDTQ58F21 947 aaPredicted RBP17.57■□□□□ 0.4
RNF40-209ENST00000566703 CWC27Q6UX04 472 aaKnown RBP17.57■□□□□ 0.4
RNF40-209ENST00000566703 SLC30A10Q6XR72 485 aa17.57■□□□□ 0.4
RNF40-209ENST00000566703 RPUSD2Q8IZ73 545 aaKnown RBP17.57■□□□□ 0.4
RNF40-209ENST00000566703 TIFAQ96CG3 184 aa17.57■□□□□ 0.4
RNF40-209ENST00000566703 NOC4LQ9BVI4 516 aaKnown RBP17.57■□□□□ 0.4
RNF40-209ENST00000566703 ZNF576Q9H609 170 aa17.57■□□□□ 0.4
RNF40-209ENST00000566703 ACRP10323 421 aa17.56■□□□□ 0.4
RNF40-209ENST00000566703 PTGS1P23219 599 aa17.56■□□□□ 0.4
RNF40-209ENST00000566703 PURAQ00577 322 aaKnown RBP17.56■□□□□ 0.4
RNF40-209ENST00000566703 PNMA1Q8ND90 353 aa17.56■□□□□ 0.4
RNF40-209ENST00000566703 SCFD2Q8WU76 684 aa17.56■□□□□ 0.4
RNF40-209ENST00000566703 TRPV6Q9H1D0 765 aa17.56■□□□□ 0.4
RNF40-209ENST00000566703 GPHNQ9NQX3 736 aaPredicted RBP17.56■□□□□ 0.4
RNF40-209ENST00000566703 ZSWIM5Q9P217 1185 aa17.56■□□□□ 0.4
RNF40-209ENST00000566703 NEDD4P46934 1319 aa17.55■□□□□ 0.4
RNF40-209ENST00000566703 RAD50Q92878 1312 aa17.55■□□□□ 0.4
RNF40-209ENST00000566703 B4GALT4O60513 344 aa17.55■□□□□ 0.4
RNF40-209ENST00000566703 KDM4AO75164 1064 aa17.55■□□□□ 0.4
RNF40-209ENST00000566703 GRIN2CQ14957 1233 aa17.55■□□□□ 0.4
RNF40-209ENST00000566703 IMMTQ16891 758 aaKnown RBP17.55■□□□□ 0.4
RNF40-209ENST00000566703 ASPRV1Q53RT3 343 aa17.55■□□□□ 0.4
RNF40-209ENST00000566703 OR6J1Q8NGC5 347 aa17.55■□□□□ 0.4
RNF40-209ENST00000566703 ZSCAN10Q96SZ4 725 aaPredicted RBP17.55■□□□□ 0.4
RNF40-209ENST00000566703 ZKSCAN3Q9BRR0 538 aa17.55■□□□□ 0.4
RNF40-209ENST00000566703 MTG1Q9BT17 334 aaPredicted RBP17.55■□□□□ 0.4
RNF40-209ENST00000566703 COL25A1Q9BXS0 654 aaPredicted RBP17.55■□□□□ 0.4
RNF40-209ENST00000566703 KRT23Q9C075 422 aa17.55■□□□□ 0.4
RNF40-209ENST00000566703 UBA5Q9GZZ9 404 aa17.55■□□□□ 0.4
RNF40-209ENST00000566703 ALDH8A1Q9H2A2 487 aaPredicted RBP17.55■□□□□ 0.4
RNF40-209ENST00000566703 KAT14Q9H8E8 782 aa17.55■□□□□ 0.4
RNF40-209ENST00000566703 ABCB11O95342 1321 aa17.54■□□□□ 0.4
RNF40-209ENST00000566703 A6NJR5 290 aa17.54■□□□□ 0.4
RNF40-209ENST00000566703 GOLGA8HP0CJ92 632 aa17.54■□□□□ 0.4
RNF40-209ENST00000566703 PSMC6P62333 389 aa17.54■□□□□ 0.4
RNF40-209ENST00000566703 PPP2R5BQ15173 497 aa17.54■□□□□ 0.4
RNF40-209ENST00000566703 RAB30Q15771 203 aa17.54■□□□□ 0.4
RNF40-209ENST00000566703 MCF2L2Q86YR7 1114 aa17.54■□□□□ 0.4
RNF40-209ENST00000566703 EXOC6Q8TAG9 804 aa17.54■□□□□ 0.4
RNF40-209ENST00000566703 PBX4Q9BYU1 374 aa17.54■□□□□ 0.4
RNF40-209ENST00000566703 CNNM2Q9H8M5 875 aa17.54■□□□□ 0.4
RNF40-209ENST00000566703 COL6A3P12111 3177 aa17.53■□□□□ 0.4
RNF40-209ENST00000566703 B4E1Z4 1266 aa17.53■□□□□ 0.4
RNF40-209ENST00000566703 PFKMP08237 780 aa17.53■□□□□ 0.4
RNF40-209ENST00000566703 MYL3P08590 195 aa17.53■□□□□ 0.4
RNF40-209ENST00000566703 PTPN11Q06124 597 aaPredicted RBP17.53■□□□□ 0.4
RNF40-209ENST00000566703 TTLL4Q14679 1199 aa17.53■□□□□ 0.4
RNF40-209ENST00000566703 CDC37Q16543 378 aaPredicted RBP17.53■□□□□ 0.4
RNF40-209ENST00000566703 ADGRF4Q8IZF3 695 aa17.53■□□□□ 0.4
RNF40-209ENST00000566703 MSRAQ9UJ68 235 aa17.53■□□□□ 0.4
RNF40-209ENST00000566703 UMODL1Q5DID0 1318 aa17.52■□□□□ 0.4
RNF40-209ENST00000566703 GRXCR1A8MXD5 290 aa17.52■□□□□ 0.4
RNF40-209ENST00000566703 TXNP10599 105 aaKnown RBP17.52■□□□□ 0.4
RNF40-209ENST00000566703 PBX2P40425 430 aa17.52■□□□□ 0.4
RNF40-209ENST00000566703 CCL23P55773 120 aa17.52■□□□□ 0.4
RNF40-209ENST00000566703 USH1GQ495M9 461 aa17.52■□□□□ 0.4
RNF40-209ENST00000566703 NFRKBQ6P4R8 1299 aa17.52■□□□□ 0.4
RNF40-209ENST00000566703 ENAHQ8N8S7 591 aaPredicted RBP17.52■□□□□ 0.4
RNF40-209ENST00000566703 NSUN6Q8TEA1 469 aaKnown RBP17.52■□□□□ 0.4
RNF40-209ENST00000566703 IWS1Q96ST2 819 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms