RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 LARP6Q9BRS8 491 aaKnown RBP30.18■■■□□ 2.42
NME3-209ENST00000566600 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.18■■■□□ 2.421e-12■■□□□ 11.8
NME3-209ENST00000566600 V9GY48 417 aaPredicted RBP30.18■■■□□ 2.42
NME3-209ENST00000566600 SOWAHBA6NEL2 793 aa30.17■■■□□ 2.42
NME3-209ENST00000566600 GHRHRQ02643 423 aa30.17■■■□□ 2.42
NME3-209ENST00000566600 CPLX2Q6PUV4 134 aaKnown RBP30.17■■■□□ 2.42
NME3-209ENST00000566600 FGD4Q96M96 766 aa30.17■■■□□ 2.42
NME3-209ENST00000566600 MPHOSPH6Q99547 160 aaKnown RBP30.17■■■□□ 2.42
NME3-209ENST00000566600 KIF2CQ99661 725 aa30.17■■■□□ 2.42
NME3-209ENST00000566600 PAK6Q9NQU5 681 aaPredicted RBP30.17■■■□□ 2.42
NME3-209ENST00000566600 CNPY2Q9Y2B0 182 aa30.17■■■□□ 2.42
NME3-209ENST00000566600 B4DLN1 442 aa30.16■■■□□ 2.42
NME3-209ENST00000566600 hCG_1984214I3L0E3 225 aa30.16■■■□□ 2.42
NME3-209ENST00000566600 CPLX1O14810 134 aa30.16■■■□□ 2.42
NME3-209ENST00000566600 CFBP00751 764 aa30.16■■■□□ 2.42
NME3-209ENST00000566600 GJB1P08034 283 aa30.16■■■□□ 2.42
NME3-209ENST00000566600 CAPN2P17655 700 aa30.16■■■□□ 2.42
NME3-209ENST00000566600 MRPL12P52815 198 aaKnown RBP30.16■■■□□ 2.42
NME3-209ENST00000566600 ZNF713Q8N859 430 aaPredicted RBP30.16■■■□□ 2.42
NME3-209ENST00000566600 DNERQ8NFT8 737 aa30.16■■■□□ 2.42
NME3-209ENST00000566600 SLKQ9H2G2 1235 aaPredicted RBP30.16■■■□□ 2.42
NME3-209ENST00000566600 TPCN1Q9ULQ1 816 aa30.16■■■□□ 2.42
NME3-209ENST00000566600 hCG_1642624A0A1W2PR95 340 aa30.15■■■□□ 2.42
NME3-209ENST00000566600 OPLAHO14841 1288 aa30.15■■■□□ 2.42
NME3-209ENST00000566600 CYBAP13498 195 aa30.15■■■□□ 2.42
NME3-209ENST00000566600 IFNAR1P17181 557 aa30.15■■■□□ 2.42
NME3-209ENST00000566600 HSD17B4P51659 736 aa30.15■■■□□ 2.42
NME3-209ENST00000566600 AKAP17AQ02040 695 aaKnown RBP30.15■■■□□ 2.42
NME3-209ENST00000566600 STK3Q13188 491 aa30.15■■■□□ 2.42
NME3-209ENST00000566600 RABEP1Q15276 862 aa30.15■■■□□ 2.42
NME3-209ENST00000566600 TBC1D32Q96NH3 1257 aa30.15■■■□□ 2.42
NME3-209ENST00000566600 NCOA5Q9HCD5 579 aaKnown RBP30.15■■■□□ 2.42
NME3-209ENST00000566600 CENPFP49454 3210 aa30.14■■■□□ 2.42
NME3-209ENST00000566600 PRPF3O43395 683 aaKnown RBP30.14■■■□□ 2.42
NME3-209ENST00000566600 PFKFB2O60825 505 aa30.14■■■□□ 2.42
NME3-209ENST00000566600 NTRK3Q16288 839 aa30.14■■■□□ 2.42
NME3-209ENST00000566600 ARMCX2Q7L311 632 aa30.14■■■□□ 2.42
NME3-209ENST00000566600 HEATR3Q7Z4Q2 680 aa30.14■■■□□ 2.42
NME3-209ENST00000566600 SYTL5Q8TDW5 730 aaPredicted RBP30.14■■■□□ 2.42
NME3-209ENST00000566600 TBC1D5Q92609 795 aa30.14■■■□□ 2.42
NME3-209ENST00000566600 GCOM1H8Y6P7 765 aaPredicted RBP30.13■■■□□ 2.41
NME3-209ENST00000566600 POLR2MP0CAP2 368 aa30.13■■■□□ 2.41
NME3-209ENST00000566600 CCND3P30281 292 aaPredicted RBP30.13■■■□□ 2.41
NME3-209ENST00000566600 ALDH5A1P51649 535 aaPredicted RBP30.13■■■□□ 2.41
NME3-209ENST00000566600 RNF26Q9BY78 433 aaPredicted RBP30.13■■■□□ 2.41
NME3-209ENST00000566600 ABHD16BQ9H3Z7 469 aa30.13■■■□□ 2.41
NME3-209ENST00000566600 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.13■■■□□ 2.41
NME3-209ENST00000566600 MSCO60682 206 aa30.12■■■□□ 2.41
NME3-209ENST00000566600 SNAI1O95863 264 aaPredicted RBP30.12■■■□□ 2.41
NME3-209ENST00000566600 CNGA1P29973 690 aa30.12■■■□□ 2.41
NME3-209ENST00000566600 PPP1R18Q6NYC8 613 aa30.12■■■□□ 2.41
NME3-209ENST00000566600 TRIM22Q8IYM9 498 aa30.12■■■□□ 2.41
NME3-209ENST00000566600 CUL5Q93034 780 aa30.12■■■□□ 2.41
NME3-209ENST00000566600 DEFB118Q96PH6 123 aa30.12■■■□□ 2.41
NME3-209ENST00000566600 PURBQ96QR8 312 aaKnown RBP30.12■■■□□ 2.41
NME3-209ENST00000566600 CDKL5O76039 1030 aa30.11■■■□□ 2.41
NME3-209ENST00000566600 GJA8P48165 433 aa30.11■■■□□ 2.41
NME3-209ENST00000566600 SOX10P56693 466 aa30.11■■■□□ 2.41
NME3-209ENST00000566600 PFKFB3Q16875 520 aaPredicted RBP30.11■■■□□ 2.41
NME3-209ENST00000566600 PRAMEF19Q5SWL8 479 aa30.11■■■□□ 2.41
NME3-209ENST00000566600 TEX2Q8IWB9 1127 aa30.11■■■□□ 2.41
NME3-209ENST00000566600 TRPV1Q8NER1 839 aa30.11■■■□□ 2.41
NME3-209ENST00000566600 MORC4Q8TE76 937 aa30.11■■■□□ 2.41
NME3-209ENST00000566600 NSUN6Q8TEA1 469 aaKnown RBP30.11■■■□□ 2.41
NME3-209ENST00000566600 LCTP09848 1927 aa30.11■■■□□ 2.41
NME3-209ENST00000566600 ASTN1O14525 1302 aa30.11■■■□□ 2.41
NME3-209ENST00000566600 CAPN15O75808 1086 aa30.1■■■□□ 2.41
NME3-209ENST00000566600 SGPL1O95470 568 aa30.1■■■□□ 2.41
NME3-209ENST00000566600 SCG2P13521 617 aa30.1■■■□□ 2.41
NME3-209ENST00000566600 WWC2Q6AWC2 1192 aa30.1■■■□□ 2.41
NME3-209ENST00000566600 NOL8Q76FK4 1167 aaKnown RBP30.1■■■□□ 2.41
NME3-209ENST00000566600 U2AF1L4Q8WU68 220 aaKnown RBP30.1■■■□□ 2.41
NME3-209ENST00000566600 GPKOWQ92917 476 aaPredicted RBP eCLIP30.1■■■□□ 2.41
NME3-209ENST00000566600 PHKBQ93100 1093 aa30.1■■■□□ 2.41
NME3-209ENST00000566600 SLC26A6Q9BXS9 759 aa30.1■■■□□ 2.41
NME3-209ENST00000566600 PSTPIP2Q9H939 334 aa30.1■■■□□ 2.41
NME3-209ENST00000566600 LIMCH1Q9UPQ0 1083 aa30.1■■■□□ 2.41
NME3-209ENST00000566600 SEPT4O43236 478 aa30.09■■■□□ 2.41
NME3-209ENST00000566600 NAPAP54920 295 aa30.09■■■□□ 2.41
NME3-209ENST00000566600 SSRP1Q08945 709 aaKnown RBP30.09■■■□□ 2.41
NME3-209ENST00000566600 SCRN1Q12765 414 aa30.09■■■□□ 2.41
NME3-209ENST00000566600 ACVR2BQ13705 512 aa30.09■■■□□ 2.41
NME3-209ENST00000566600 KIAA0100Q14667 2235 aaKnown RBP30.09■■■□□ 2.41
NME3-209ENST00000566600 TAAR1Q96RJ0 339 aa30.09■■■□□ 2.41
NME3-209ENST00000566600 RMDN3Q96TC7 470 aa30.09■■■□□ 2.41
NME3-209ENST00000566600 BARHL2Q9NY43 387 aa30.09■■■□□ 2.41
NME3-209ENST00000566600 POTEFA5A3E0 1075 aa30.08■■■□□ 2.41
NME3-209ENST00000566600 PIK3CDO00329 1044 aa30.08■■■□□ 2.41
NME3-209ENST00000566600 ST18O60284 1047 aa30.08■■■□□ 2.41
NME3-209ENST00000566600 ZNF865P0CJ78 1059 aaPredicted RBP30.08■■■□□ 2.41
NME3-209ENST00000566600 HOXA13P31271 388 aaPredicted RBP30.08■■■□□ 2.41
NME3-209ENST00000566600 ME3Q16798 604 aa30.08■■■□□ 2.41
NME3-209ENST00000566600 CCDC12Q8WUD4 166 aaPredicted RBP30.08■■■□□ 2.41
NME3-209ENST00000566600 IWS1Q96ST2 819 aa30.08■■■□□ 2.41
NME3-209ENST00000566600 COL20A1Q9P218 1284 aa30.08■■■□□ 2.41
NME3-209ENST00000566600 DDX20Q9UHI6 824 aaKnown RBP30.08■■■□□ 2.41
NME3-209ENST00000566600 ZHX1Q9UKY1 873 aaPredicted RBP30.08■■■□□ 2.41
NME3-209ENST00000566600 PDE4DQ08499 809 aa30.07■■■□□ 2.4
NME3-209ENST00000566600 ARHGEF16Q5VV41 709 aa30.07■■■□□ 2.4
NME3-209ENST00000566600 SMARCC2Q8TAQ2 1214 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms