RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 NUCB1Q02818 461 aa14.02□□□□□ -0.17
UBR1-206ENST00000566493 CCDC178Q5BJE1 867 aa14.02□□□□□ -0.17
UBR1-206ENST00000566493 CXCL17Q6UXB2 119 aa14.02□□□□□ -0.17
UBR1-206ENST00000566493 PLEKHM2Q8IWE5 1019 aa14.02□□□□□ -0.17
UBR1-206ENST00000566493 FAM126BQ8IXS8 530 aa14.02□□□□□ -0.17
UBR1-206ENST00000566493 PURBQ96QR8 312 aaKnown RBP14.02□□□□□ -0.17
UBR1-206ENST00000566493 CDX2Q99626 313 aaPredicted RBP14.02□□□□□ -0.17
UBR1-206ENST00000566493 SEZ6LQ9BYH1 1024 aa14.02□□□□□ -0.17
UBR1-206ENST00000566493 PPP1R12CQ9BZL4 782 aa14.02□□□□□ -0.17
UBR1-206ENST00000566493 PDGFCQ9NRA1 345 aa14.02□□□□□ -0.17
UBR1-206ENST00000566493 DDX49Q9Y6V7 483 aaKnown RBP14.02□□□□□ -0.17
UBR1-206ENST00000566493 LRRC37A2A6NM11 1700 aa14.01□□□□□ -0.17
UBR1-206ENST00000566493 TMEM265A0A087WTH1 108 aa14.01□□□□□ -0.17
UBR1-206ENST00000566493 LOC102724159A0A0B4J2E5 919 aa14.01□□□□□ -0.17
UBR1-206ENST00000566493 NFIBO00712 420 aa14.01□□□□□ -0.17
UBR1-206ENST00000566493 CALML3P27482 149 aa14.01□□□□□ -0.17
UBR1-206ENST00000566493 ALDH5A1P51649 535 aaPredicted RBP14.01□□□□□ -0.17
UBR1-206ENST00000566493 ZNF543Q08ER8 600 aa14.01□□□□□ -0.17
UBR1-206ENST00000566493 ITGA7Q13683 1181 aa14.01□□□□□ -0.17
UBR1-206ENST00000566493 PWP2Q15269 919 aaKnown RBP14.01□□□□□ -0.17
UBR1-206ENST00000566493 GPATCH4Q5T3I0 446 aaKnown RBP14.01□□□□□ -0.17
UBR1-206ENST00000566493 TAPT1Q6NXT6 567 aa14.01□□□□□ -0.17
UBR1-206ENST00000566493 CWC27Q6UX04 472 aaKnown RBP14.01□□□□□ -0.17
UBR1-206ENST00000566493 RNF207Q6ZRF8 634 aa14.01□□□□□ -0.17
UBR1-206ENST00000566493 IQCA1Q86XH1 822 aa14.01□□□□□ -0.17
UBR1-206ENST00000566493 TBC1D10CQ8IV04 446 aa14.01□□□□□ -0.17
UBR1-206ENST00000566493 MORC4Q8TE76 937 aa14.01□□□□□ -0.17
UBR1-206ENST00000566493 OSBPL3Q9H4L5 887 aa14.01□□□□□ -0.17
UBR1-206ENST00000566493 B4DLN1 442 aa14□□□□□ -0.17
UBR1-206ENST00000566493 IGHDP01880 384 aa14□□□□□ -0.17
UBR1-206ENST00000566493 MRPL12P52815 198 aaKnown RBP14□□□□□ -0.17
UBR1-206ENST00000566493 PDE4DQ08499 809 aa14□□□□□ -0.17
UBR1-206ENST00000566493 DUSP28Q4G0W2 176 aa14□□□□□ -0.17
UBR1-206ENST00000566493 DGKHQ86XP1 1220 aa14□□□□□ -0.17
UBR1-206ENST00000566493 BUD13Q9BRD0 619 aaKnown RBP eCLIP14□□□□□ -0.17
UBR1-206ENST00000566493 ZKSCAN3Q9BRR0 538 aa14□□□□□ -0.17
UBR1-206ENST00000566493 WDR11Q9BZH6 1224 aa14□□□□□ -0.17
UBR1-206ENST00000566493 LCTP09848 1927 aa14□□□□□ -0.17
UBR1-206ENST00000566493 NEDD4P46934 1319 aa13.99□□□□□ -0.17
UBR1-206ENST00000566493 WDR19Q8NEZ3 1342 aa13.99□□□□□ -0.17
UBR1-206ENST00000566493 CD4P01730 458 aa13.99□□□□□ -0.17
UBR1-206ENST00000566493 SNHG28P0DPA3 235 aa13.99□□□□□ -0.17
UBR1-206ENST00000566493 CSF2RAP15509 400 aa13.99□□□□□ -0.17
UBR1-206ENST00000566493 CPT1AP50416 773 aa13.99□□□□□ -0.17
UBR1-206ENST00000566493 BRDTQ58F21 947 aaPredicted RBP13.99□□□□□ -0.17
UBR1-206ENST00000566493 PSRC1Q6PGN9 363 aaPredicted RBP13.99□□□□□ -0.17
UBR1-206ENST00000566493 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.99□□□□□ -0.17
UBR1-206ENST00000566493 SLC43A3Q8NBI5 491 aa13.99□□□□□ -0.17
UBR1-206ENST00000566493 EXOC6Q8TAG9 804 aa13.99□□□□□ -0.17
UBR1-206ENST00000566493 CLEC4DQ8WXI8 215 aa13.99□□□□□ -0.17
UBR1-206ENST00000566493 MYLIPQ8WY64 445 aa13.99□□□□□ -0.17
UBR1-206ENST00000566493 TTYH1Q9H313 450 aaPredicted RBP13.99□□□□□ -0.17
UBR1-206ENST00000566493 KAT14Q9H8E8 782 aa13.99□□□□□ -0.17
UBR1-206ENST00000566493 POLR3EQ9NVU0 708 aa13.99□□□□□ -0.17
UBR1-206ENST00000566493 CTNNA3Q9UI47 895 aa13.99□□□□□ -0.17
UBR1-206ENST00000566493 RAD50Q92878 1312 aa13.98□□□□□ -0.17
UBR1-206ENST00000566493 KDM4AO75164 1064 aa13.98□□□□□ -0.17
UBR1-206ENST00000566493 GOLGA8HP0CJ92 632 aa13.98□□□□□ -0.17
UBR1-206ENST00000566493 ACRP10323 421 aa13.98□□□□□ -0.17
UBR1-206ENST00000566493 FOSL2P15408 326 aa13.98□□□□□ -0.17
UBR1-206ENST00000566493 CYP2C18P33260 490 aa13.98□□□□□ -0.17
UBR1-206ENST00000566493 RPS6P62753 249 aaKnown RBP13.98□□□□□ -0.17
UBR1-206ENST00000566493 IMMTQ16891 758 aaKnown RBP13.98□□□□□ -0.17
UBR1-206ENST00000566493 USH1GQ495M9 461 aa13.98□□□□□ -0.17
UBR1-206ENST00000566493 TMEM240Q5SV17 173 aa13.98□□□□□ -0.17
UBR1-206ENST00000566493 SLC30A10Q6XR72 485 aa13.98□□□□□ -0.17
UBR1-206ENST00000566493 ZNF579Q8NAF0 562 aaKnown RBP13.98□□□□□ -0.17
UBR1-206ENST00000566493 PNMA1Q8ND90 353 aa13.98□□□□□ -0.17
UBR1-206ENST00000566493 OR6J1Q8NGC5 347 aa13.98□□□□□ -0.17
UBR1-206ENST00000566493 MAFAQ8NHW3 353 aaPredicted RBP13.98□□□□□ -0.17
UBR1-206ENST00000566493 MTIF3Q9H2K0 278 aaKnown RBP13.98□□□□□ -0.17
UBR1-206ENST00000566493 HIPK3Q9H422 1215 aa13.98□□□□□ -0.17
UBR1-206ENST00000566493 IL23AQ9NPF7 189 aa13.98□□□□□ -0.17
UBR1-206ENST00000566493 GPHNQ9NQX3 736 aaPredicted RBP13.98□□□□□ -0.17
UBR1-206ENST00000566493 LAMA4Q16363 1823 aa13.98□□□□□ -0.17
UBR1-206ENST00000566493 RBM47A0AV96 593 aaKnown RBP13.97□□□□□ -0.17
UBR1-206ENST00000566493 MYL3P08590 195 aa13.97□□□□□ -0.17
UBR1-206ENST00000566493 PTGS1P23219 599 aa13.97□□□□□ -0.17
UBR1-206ENST00000566493 DNAJB2P25686 324 aa13.97□□□□□ -0.17
UBR1-206ENST00000566493 PSMC6P62333 389 aa13.97□□□□□ -0.17
UBR1-206ENST00000566493 TMEM63BQ5T3F8 832 aa13.97□□□□□ -0.17
UBR1-206ENST00000566493 ZNF365Q70YC5 407 aa13.97□□□□□ -0.17
UBR1-206ENST00000566493 C16orf59Q7L2K0 433 aa13.97□□□□□ -0.17
UBR1-206ENST00000566493 RGS22Q8NE09 1264 aa13.97□□□□□ -0.17
UBR1-206ENST00000566493 DNERQ8NFT8 737 aa13.97□□□□□ -0.17
UBR1-206ENST00000566493 SCFD2Q8WU76 684 aa13.97□□□□□ -0.17
UBR1-206ENST00000566493 TIFAQ96CG3 184 aa13.97□□□□□ -0.17
UBR1-206ENST00000566493 ZSCAN10Q96SZ4 725 aaPredicted RBP13.97□□□□□ -0.17
UBR1-206ENST00000566493 DSCC1Q9BVC3 393 aa13.97□□□□□ -0.17
UBR1-206ENST00000566493 KRT23Q9C075 422 aa13.97□□□□□ -0.17
UBR1-206ENST00000566493 UBA5Q9GZZ9 404 aa13.97□□□□□ -0.17
UBR1-206ENST00000566493 TRPV6Q9H1D0 765 aa13.97□□□□□ -0.17
UBR1-206ENST00000566493 GRIN2DO15399 1336 aa13.96□□□□□ -0.17
UBR1-206ENST00000566493 B4E1Z4 1266 aa13.96□□□□□ -0.17
UBR1-206ENST00000566493 NKRFO15226 690 aaKnown RBP eCLIP13.96□□□□□ -0.17
UBR1-206ENST00000566493 DHX16O60231 1041 aaKnown RBP13.96□□□□□ -0.17
UBR1-206ENST00000566493 B4GALT4O60513 344 aa13.96□□□□□ -0.17
UBR1-206ENST00000566493 FGBP02675 491 aa13.96□□□□□ -0.17
UBR1-206ENST00000566493 PPP2R5BQ15173 497 aa13.96□□□□□ -0.17
UBR1-206ENST00000566493 ASPRV1Q53RT3 343 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms