RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 FAM237AA0A1B0GTK4 181 aa11.18□□□□□ -0.62
SF3B3-207ENST00000566095 CTAGE5O15320 804 aa11.18□□□□□ -0.62
SF3B3-207ENST00000566095 PPP1R11O60927 126 aaPredicted RBP11.18□□□□□ -0.62
SF3B3-207ENST00000566095 CFBP00751 764 aa11.18□□□□□ -0.62
SF3B3-207ENST00000566095 GHRHRQ02643 423 aa11.18□□□□□ -0.62
SF3B3-207ENST00000566095 FMR1Q06787 632 aaKnown RBP eCLIP11.18□□□□□ -0.622e-6■■□□□ 12.2
SF3B3-207ENST00000566095 TTC38Q5R3I4 469 aa11.18□□□□□ -0.62
SF3B3-207ENST00000566095 L1TD1Q5T7N2 865 aaKnown RBP11.18□□□□□ -0.62
SF3B3-207ENST00000566095 ANO1Q5XXA6 986 aa11.18□□□□□ -0.62
SF3B3-207ENST00000566095 XRRA1Q6P2D8 792 aa11.18□□□□□ -0.62
SF3B3-207ENST00000566095 MOXD1Q6UVY6 613 aa11.18□□□□□ -0.62
SF3B3-207ENST00000566095 ZNF579Q8NAF0 562 aaKnown RBP11.18□□□□□ -0.62
SF3B3-207ENST00000566095 LINC00301Q8NCQ3 95 aa11.18□□□□□ -0.62
SF3B3-207ENST00000566095 CCDC34Q96HJ3 373 aa11.18□□□□□ -0.62
SF3B3-207ENST00000566095 TRERF1Q96PN7 1200 aa11.18□□□□□ -0.62
SF3B3-207ENST00000566095 RAB34Q9BZG1 259 aa11.18□□□□□ -0.62
SF3B3-207ENST00000566095 CNPY2Q9Y2B0 182 aa11.18□□□□□ -0.62
SF3B3-207ENST00000566095 FSD2A1L4K1 749 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 BTBD19C9JJ37 291 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 FIBPO43427 364 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 MARCH6O60337 910 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 GJA5P36382 358 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 CLK2P49760 499 aaKnown RBP11.17□□□□□ -0.62
SF3B3-207ENST00000566095 HSD17B4P51659 736 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 USP11P51784 963 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 SNAP25P60880 206 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 NR5A1Q13285 461 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 DEFB115Q30KQ5 88 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 CCDC183Q5T5S1 534 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 GPAT2Q6NUI2 795 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 RNF207Q6ZRF8 634 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 GPRC5AQ8NFJ5 357 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 GPT2Q8TD30 523 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 BRI3BPQ8WY22 251 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 FERMT2Q96AC1 680 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 AGBL1Q96MI9 1066 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 P2RX7Q99572 595 aaKnown RBP11.17□□□□□ -0.62
SF3B3-207ENST00000566095 PYM1Q9BRP8 204 aaKnown RBP11.17□□□□□ -0.62
SF3B3-207ENST00000566095 PAGR1Q9BTK6 254 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 ANO3Q9BYT9 981 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 SPATC1LQ9H0A9 340 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 ZFYVE28Q9HCC9 887 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 GJB4Q9NTQ9 266 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 SLC5A4Q9NY91 659 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 BIN2Q9UBW5 565 aaPredicted RBP11.17□□□□□ -0.62
SF3B3-207ENST00000566095 ADD3Q9UEY8 706 aaKnown RBP11.17□□□□□ -0.62
SF3B3-207ENST00000566095 ZNF214Q9UL59 606 aaPredicted RBP11.17□□□□□ -0.62
SF3B3-207ENST00000566095 IVNS1ABPQ9Y6Y0 642 aa11.17□□□□□ -0.62
SF3B3-207ENST00000566095 ZNF536O15090 1300 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 MYH15Q9Y2K3 1946 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 LOC102724159A0A0B4J2E5 919 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 RASSF10A6NK89 507 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 KIF28PB7ZC32 967 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 M0R2N6 131 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 SPTLC2O15270 562 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 ME1P48163 572 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 SETQ01105 290 aaPredicted RBP11.16□□□□□ -0.62
SF3B3-207ENST00000566095 MKRN3Q13064 507 aaKnown RBP11.16□□□□□ -0.62
SF3B3-207ENST00000566095 DGKZQ13574 1117 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 MOGSQ13724 837 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 KCTD2Q14681 263 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 TMEM132BQ14DG7 1078 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 PWP2Q15269 919 aaKnown RBP11.16□□□□□ -0.62
SF3B3-207ENST00000566095 TAF1CQ15572 869 aaPredicted RBP11.16□□□□□ -0.62
SF3B3-207ENST00000566095 FAM110CQ1W6H9 321 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 TMEM266Q2M3C6 531 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 FOXD4L6Q3SYB3 417 aaPredicted RBP11.16□□□□□ -0.62
SF3B3-207ENST00000566095 JAKMIP3Q5VZ66 844 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 ARL6IP4Q66PJ3 421 aaKnown RBP11.16□□□□□ -0.62
SF3B3-207ENST00000566095 TYW1BQ6NUM6 668 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 FOXD4L3Q6VB84 417 aaPredicted RBP11.16□□□□□ -0.62
SF3B3-207ENST00000566095 RBM43Q6ZSC3 357 aaKnown RBP11.16□□□□□ -0.62
SF3B3-207ENST00000566095 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.16□□□□□ -0.62
SF3B3-207ENST00000566095 NCAPG2Q86XI2 1143 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 ANKRD35Q8N283 1001 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 REPS2Q8NFH8 660 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 OXER1Q8TDS5 423 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 TNFRSF25Q93038 417 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 TIGD1Q96MW7 591 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 HOMER2Q9NSB8 354 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 TCEAL9Q9UHQ7 104 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 STK24Q9Y6E0 443 aa11.16□□□□□ -0.62
SF3B3-207ENST00000566095 TCHHQ07283 1943 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 PARP14Q460N5 1801 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 MEIS2O14770 477 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 STRNO43815 780 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 NEMFO60524 1076 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 DTNBO60941 627 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 STAM2O75886 525 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 CMA1P23946 247 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 MAPK4P31152 587 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 ZNF76P36508 570 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 SREBF1P36956 1147 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 TXLNAP40222 546 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 PRPHP41219 470 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 MRE11P49959 708 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 ERVK-9P63128 1117 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 ERVK-24P63145 666 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 SEMA3FQ13275 785 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 NPY5RQ15761 445 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms