RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 RAG1P15918 1043 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 KIF5BP33176 963 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 ZNF792Q3KQV3 632 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 C1orf53Q5VUE5 145 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 CCDC174Q6PII3 467 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 NFXL1Q6ZNB6 911 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 MAP3K14Q99558 947 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 LZTS2Q9BRK4 669 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 TINF2Q9BSI4 451 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 RNF146Q9NTX7 359 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 PHF24Q9UPV7 400 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 WDR19Q8NEZ3 1342 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 LOC102724159A0A0B4J2E5 919 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 A0A1W2PQ45 241 aaPredicted RBP12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 A0A1W2PQY0 241 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 KIAA0355O15063 1070 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 RARBP10826 455 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 SLC16A2P36021 539 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 GNAQP50148 359 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 PWP2Q15269 919 aaKnown RBP12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 SEC23AQ15436 765 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 TSGA10IPQ3SY00 556 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 TTBK2Q6IQ55 1244 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 MCF2L2Q86YR7 1114 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 CTCFLQ8NI51 663 aaPredicted RBP12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 PPM1EQ8WY54 764 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 AGBL1Q96MI9 1066 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 NEK1Q96PY6 1258 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 HOMER2Q9NSB8 354 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 TMEM39AQ9NV64 488 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 RIPK3Q9Y572 518 aa12.41□□□□□ -0.42
NSMCE1-211ENST00000566087 SYNGAP1Q96PV0 1343 aa12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 DNAJC25-GNG10A0A024R161 153 aa12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 KLRF2D3W0D1 207 aa12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 PRC1O43663 620 aa12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 DNAJB2P25686 324 aa12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 PSMA5P28066 241 aa12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 LIFRP42702 1097 aa12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 FGD1P98174 961 aa12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 FPGSQ05932 587 aa12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 MAMDC4Q6UXC1 1216 aa12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 CYB5R4Q7L1T6 521 aa12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 RNF180Q86T96 592 aa12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 RGS22Q8NE09 1264 aa12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 SYMPKQ92797 1274 aaKnown RBP12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 ABHD16BQ9H3Z7 469 aa12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 RAPGEFL1Q9UHV5 662 aa12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 MRPL11Q9Y3B7 192 aaKnown RBP12.4□□□□□ -0.42
NSMCE1-211ENST00000566087 ZNF865P0CJ78 1059 aaPredicted RBP12.39□□□□□ -0.43
NSMCE1-211ENST00000566087 GOLGA8HP0CJ92 632 aa12.39□□□□□ -0.43
NSMCE1-211ENST00000566087 SMARCA1P28370 1054 aa12.39□□□□□ -0.43
NSMCE1-211ENST00000566087 FAAP100Q0VG06 881 aa12.39□□□□□ -0.43
NSMCE1-211ENST00000566087 NSMFQ6X4W1 530 aa12.39□□□□□ -0.43
NSMCE1-211ENST00000566087 FBXO11Q86XK2 927 aa12.39□□□□□ -0.43
NSMCE1-211ENST00000566087 ADGRF4Q8IZF3 695 aa12.39□□□□□ -0.43
NSMCE1-211ENST00000566087 SAMD3Q8N6K7 520 aa12.39□□□□□ -0.43
NSMCE1-211ENST00000566087 IGDCC4Q8TDY8 1250 aa12.39□□□□□ -0.43
NSMCE1-211ENST00000566087 AMNQ9BXJ7 453 aa12.39□□□□□ -0.43
NSMCE1-211ENST00000566087 UBA5Q9GZZ9 404 aa12.39□□□□□ -0.43
NSMCE1-211ENST00000566087 ZNF576Q9H609 170 aa12.39□□□□□ -0.43
NSMCE1-211ENST00000566087 SPC25Q9HBM1 224 aa12.39□□□□□ -0.43
NSMCE1-211ENST00000566087 VAT1LQ9HCJ6 419 aa12.39□□□□□ -0.43
NSMCE1-211ENST00000566087 MAP3K20Q9NYL2 800 aaKnown RBP12.39□□□□□ -0.43
NSMCE1-211ENST00000566087 FAM184BQ9ULE4 1060 aa12.39□□□□□ -0.43
NSMCE1-211ENST00000566087 ZNF536O15090 1300 aa12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 ABCB11O95342 1321 aa12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 TMEM265A0A087WTH1 108 aa12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 PALM3A6NDB9 673 aaPredicted RBP12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 GRXCR1A8MXD5 290 aa12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 DDAH1O94760 285 aa12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 COL9A1P20849 921 aa12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 PBX2P40425 430 aa12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 IRX5P78411 483 aaPredicted RBP12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 TJAP1Q5JTD0 557 aa12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 RNF207Q6ZRF8 634 aa12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 DHX32Q7L7V1 743 aaKnown RBP12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 MB21D2Q8IYB1 491 aaPredicted RBP12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 TIFAQ96CG3 184 aa12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.38□□□□□ -0.435e-6■■■□□ 16.3
NSMCE1-211ENST00000566087 STARD7Q9NQZ5 370 aa12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 SLC12A7Q9Y666 1083 aa12.38□□□□□ -0.43
NSMCE1-211ENST00000566087 PTPDC1A2A3K4 754 aa12.37□□□□□ -0.43
NSMCE1-211ENST00000566087 MYADML2A6NDP7 307 aa12.37□□□□□ -0.43
NSMCE1-211ENST00000566087 TNFRSF10AO00220 468 aa12.37□□□□□ -0.43
NSMCE1-211ENST00000566087 ADAMTS4O75173 837 aa12.37□□□□□ -0.43
NSMCE1-211ENST00000566087 AKR1A1P14550 325 aa12.37□□□□□ -0.43
NSMCE1-211ENST00000566087 ACLYP53396 1101 aa12.37□□□□□ -0.43
NSMCE1-211ENST00000566087 SNAP25P60880 206 aa12.37□□□□□ -0.43
NSMCE1-211ENST00000566087 GRM4Q14833 912 aa12.37□□□□□ -0.43
NSMCE1-211ENST00000566087 PPP2R5BQ15173 497 aa12.37□□□□□ -0.43
NSMCE1-211ENST00000566087 CDC37Q16543 378 aaPredicted RBP12.37□□□□□ -0.43
NSMCE1-211ENST00000566087 CHST3Q7LGC8 479 aa12.37□□□□□ -0.43
NSMCE1-211ENST00000566087 FAM133AQ8N9E0 248 aa12.37□□□□□ -0.43
NSMCE1-211ENST00000566087 DNERQ8NFT8 737 aa12.37□□□□□ -0.43
NSMCE1-211ENST00000566087 NUP133Q8WUM0 1156 aa12.37□□□□□ -0.43
NSMCE1-211ENST00000566087 JMJD4Q9H9V9 463 aa12.37□□□□□ -0.43
NSMCE1-211ENST00000566087 A1CFQ9NQ94 594 aaKnown RBP12.37□□□□□ -0.43
NSMCE1-211ENST00000566087 CYP39A1Q9NYL5 469 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms