RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 INTS3Q68E01 1043 aaKnown RBP5.76□□□□□ -1.49
PALB2-204ENST00000566069 PPFIBP1Q86W92 1011 aa5.76□□□□□ -1.49
PALB2-204ENST00000566069 SSBP3Q9BWW4 388 aaPredicted RBP5.76□□□□□ -1.49
PALB2-204ENST00000566069 GGT7Q9UJ14 662 aa5.76□□□□□ -1.49
PALB2-204ENST00000566069 A0A1W2PQJ5 194 aa5.75□□□□□ -1.49
PALB2-204ENST00000566069 FAM86C2PA6NEL3 165 aa5.75□□□□□ -1.49
PALB2-204ENST00000566069 PPP1R11O60927 126 aaPredicted RBP5.75□□□□□ -1.49
PALB2-204ENST00000566069 TCF3P15923 654 aa5.75□□□□□ -1.49
PALB2-204ENST00000566069 ZNF20P17024 532 aa5.75□□□□□ -1.49
PALB2-204ENST00000566069 SARSP49591 514 aaKnown RBP5.75□□□□□ -1.49
PALB2-204ENST00000566069 HDLBPQ00341 1268 aaKnown RBP5.75□□□□□ -1.49
PALB2-204ENST00000566069 TBC1D10BQ4KMP7 808 aaPredicted RBP5.75□□□□□ -1.49
PALB2-204ENST00000566069 DCAF15Q66K64 600 aa5.75□□□□□ -1.49
PALB2-204ENST00000566069 CYP2R1Q6VVX0 501 aa5.75□□□□□ -1.49
PALB2-204ENST00000566069 SLITRK4Q8IW52 837 aa5.75□□□□□ -1.49
PALB2-204ENST00000566069 CCDC144CPQ8IYA2 1237 aa5.75□□□□□ -1.49
PALB2-204ENST00000566069 ALG3Q92685 438 aa5.75□□□□□ -1.49
PALB2-204ENST00000566069 PTCHD1Q96NR3 888 aa5.75□□□□□ -1.49
PALB2-204ENST00000566069 IFNGR1P15260 489 aa5.74□□□□□ -1.49
PALB2-204ENST00000566069 MCM4P33991 863 aa5.74□□□□□ -1.49
PALB2-204ENST00000566069 NOP2P46087 812 aaKnown RBP5.74□□□□□ -1.49
PALB2-204ENST00000566069 GJA9P57773 515 aa5.74□□□□□ -1.49
PALB2-204ENST00000566069 AXDND1Q5T1B0 1012 aaPredicted RBP5.74□□□□□ -1.49
PALB2-204ENST00000566069 CWF19L1Q69YN2 538 aaKnown RBP5.74□□□□□ -1.49
PALB2-204ENST00000566069 METTL16Q86W50 562 aaKnown RBP5.74□□□□□ -1.49
PALB2-204ENST00000566069 SMARCC2Q8TAQ2 1214 aa5.74□□□□□ -1.49
PALB2-204ENST00000566069 TSPAN17Q96FV3 270 aa5.74□□□□□ -1.49
PALB2-204ENST00000566069 C8orf49Q96NF6 230 aa5.74□□□□□ -1.49
PALB2-204ENST00000566069 SAMD11Q96NU1 681 aa5.74□□□□□ -1.49
PALB2-204ENST00000566069 SORCS2Q96PQ0 1159 aa5.74□□□□□ -1.49
PALB2-204ENST00000566069 SCAND2PQ9GZW5 306 aaPredicted RBP5.74□□□□□ -1.49
PALB2-204ENST00000566069 GP6Q9HCN6 339 aa5.74□□□□□ -1.49
PALB2-204ENST00000566069 DBR1Q9UK59 544 aaKnown RBP5.74□□□□□ -1.49
PALB2-204ENST00000566069 L1CAMP32004 1257 aa5.73□□□□□ -1.49
PALB2-204ENST00000566069 ZNF165P49910 485 aa5.73□□□□□ -1.49
PALB2-204ENST00000566069 PMS1P54277 932 aaKnown RBP5.73□□□□□ -1.49
PALB2-204ENST00000566069 TDRD10Q5VZ19 366 aaKnown RBP5.73□□□□□ -1.49
PALB2-204ENST00000566069 Q8N1X5 172 aa5.73□□□□□ -1.49
PALB2-204ENST00000566069 CPA5Q8WXQ8 436 aa5.73□□□□□ -1.49
PALB2-204ENST00000566069 DHRS1Q96LJ7 313 aa5.73□□□□□ -1.49
PALB2-204ENST00000566069 SYT3Q9BQG1 590 aa5.73□□□□□ -1.49
PALB2-204ENST00000566069 IGSF5Q9NSI5 407 aa5.73□□□□□ -1.49
PALB2-204ENST00000566069 CD247P20963 164 aa5.72□□□□□ -1.49
PALB2-204ENST00000566069 CACNB2Q08289 660 aaPredicted RBP5.72□□□□□ -1.49
PALB2-204ENST00000566069 APOBRQ0VD83 1088 aa5.72□□□□□ -1.49
PALB2-204ENST00000566069 USP48Q86UV5 1035 aa5.72□□□□□ -1.49
PALB2-204ENST00000566069 NT5DC4Q86YG4 428 aa5.72□□□□□ -1.49
PALB2-204ENST00000566069 FIBCD1Q8N539 461 aa5.72□□□□□ -1.49
PALB2-204ENST00000566069 TTC9BQ8N6N2 239 aa5.72□□□□□ -1.49
PALB2-204ENST00000566069 LINC00482Q8N8I6 264 aa5.72□□□□□ -1.49
PALB2-204ENST00000566069 ADAMTS17Q8TE56 1095 aa5.72□□□□□ -1.49
PALB2-204ENST00000566069 ZBTB8AQ96BR9 441 aa5.72□□□□□ -1.49
PALB2-204ENST00000566069 MCMBPQ9BTE3 642 aa5.72□□□□□ -1.49
PALB2-204ENST00000566069 ZNF451Q9Y4E5 1061 aa5.72□□□□□ -1.49
PALB2-204ENST00000566069 FHOD1Q9Y613 1164 aa5.72□□□□□ -1.49
PALB2-204ENST00000566069 OVOL3O00110 214 aa5.71□□□□□ -1.5
PALB2-204ENST00000566069 TBC1D8O95759 1140 aa5.71□□□□□ -1.5
PALB2-204ENST00000566069 PLATP00750 562 aa5.71□□□□□ -1.5
PALB2-204ENST00000566069 NOL9Q5SY16 702 aaKnown RBP5.71□□□□□ -1.5
PALB2-204ENST00000566069 NPM2Q86SE8 214 aaKnown RBP5.71□□□□□ -1.5
PALB2-204ENST00000566069 NKD1Q969G9 470 aa5.71□□□□□ -1.5
PALB2-204ENST00000566069 LOXL4Q96JB6 756 aa5.71□□□□□ -1.5
PALB2-204ENST00000566069 NT5C1AQ9BXI3 368 aa5.71□□□□□ -1.5
PALB2-204ENST00000566069 NTMQ9P121 344 aa5.71□□□□□ -1.5
PALB2-204ENST00000566069 DDX41Q9UJV9 622 aaKnown RBP5.71□□□□□ -1.5
PALB2-204ENST00000566069 SLPIP03973 132 aa5.7□□□□□ -1.5
PALB2-204ENST00000566069 SMAD4Q13485 552 aaKnown RBP5.7□□□□□ -1.5
PALB2-204ENST00000566069 CDSNQ15517 529 aa5.7□□□□□ -1.5
PALB2-204ENST00000566069 ZNF394Q53GI3 561 aa5.7□□□□□ -1.5
PALB2-204ENST00000566069 ZNF654Q8IZM8 581 aa5.7□□□□□ -1.5
PALB2-204ENST00000566069 DDX11Q96FC9 970 aa5.7□□□□□ -1.5
PALB2-204ENST00000566069 MTA3Q9BTC8 594 aa5.7□□□□□ -1.5
PALB2-204ENST00000566069 SRRDQ9UH36 339 aa5.7□□□□□ -1.5
PALB2-204ENST00000566069 PCDHGB7Q9Y5F8 929 aa5.7□□□□□ -1.5
PALB2-204ENST00000566069 TP53P04637 393 aaPredicted RBP5.69□□□□□ -1.5
PALB2-204ENST00000566069 CD3EP07766 207 aa5.69□□□□□ -1.5
PALB2-204ENST00000566069 RACK1P63244 317 aaKnown RBP5.69□□□□□ -1.5
PALB2-204ENST00000566069 KRTAP1-1Q07627 177 aa5.69□□□□□ -1.5
PALB2-204ENST00000566069 ZYXQ15942 572 aaKnown RBP5.69□□□□□ -1.5
PALB2-204ENST00000566069 C9orf131Q5VYM1 1079 aa5.69□□□□□ -1.5
PALB2-204ENST00000566069 TTLL7Q6ZT98 887 aa5.69□□□□□ -1.5
PALB2-204ENST00000566069 SPRED1Q7Z699 444 aa5.69□□□□□ -1.5
PALB2-204ENST00000566069 KIAA0825Q8IV33 1275 aa5.69□□□□□ -1.5
PALB2-204ENST00000566069 GORASP1Q9BQQ3 440 aa5.69□□□□□ -1.5
PALB2-204ENST00000566069 TGIF2Q9GZN2 237 aa5.69□□□□□ -1.5
PALB2-204ENST00000566069 ZNRF3Q9ULT6 936 aa5.69□□□□□ -1.5
PALB2-204ENST00000566069 INVSQ9Y283 1065 aa5.69□□□□□ -1.5
PALB2-204ENST00000566069 RWDD3Q9Y3V2 267 aa5.69□□□□□ -1.5
PALB2-204ENST00000566069 C6P13671 934 aa5.68□□□□□ -1.5
PALB2-204ENST00000566069 ERCC5P28715 1186 aaPredicted RBP5.68□□□□□ -1.5
PALB2-204ENST00000566069 ACVRL1P37023 503 aa5.68□□□□□ -1.5
PALB2-204ENST00000566069 TAB3Q8N5C8 712 aaPredicted RBP5.68□□□□□ -1.5
PALB2-204ENST00000566069 NETO2Q8NC67 525 aa5.68□□□□□ -1.5
PALB2-204ENST00000566069 SMARCC1Q92922 1105 aaPredicted RBP5.68□□□□□ -1.5
PALB2-204ENST00000566069 SPON2Q9BUD6 331 aa5.68□□□□□ -1.5
PALB2-204ENST00000566069 NOL6Q9H6R4 1146 aaKnown RBP5.68□□□□□ -1.5
PALB2-204ENST00000566069 FAM86C1Q9NVL1 165 aa5.68□□□□□ -1.5
PALB2-204ENST00000566069 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.68□□□□□ -1.5
PALB2-204ENST00000566069 A0A087WZG4 1122 aa5.67□□□□□ -1.5
PALB2-204ENST00000566069 CBFA2T2O43439 604 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms