RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 ANAPC15P60006 121 aa16.04■□□□□ 0.16
HERPUD1-210ENST00000565966 SYNE3Q6ZMZ3 975 aa16.04■□□□□ 0.16
HERPUD1-210ENST00000565966 HOMER1Q86YM7 354 aa16.04■□□□□ 0.16
HERPUD1-210ENST00000565966 MCF2L2Q86YR7 1114 aa16.04■□□□□ 0.16
HERPUD1-210ENST00000565966 FBXL16Q8N461 479 aa16.04■□□□□ 0.16
HERPUD1-210ENST00000565966 BRF1Q92994 677 aa16.04■□□□□ 0.16
HERPUD1-210ENST00000565966 PURBQ96QR8 312 aaKnown RBP16.04■□□□□ 0.16
HERPUD1-210ENST00000565966 PIGSQ96S52 555 aa16.04■□□□□ 0.16
HERPUD1-210ENST00000565966 LZTS2Q9BRK4 669 aa16.04■□□□□ 0.16
HERPUD1-210ENST00000565966 AGXT2Q9BYV1 514 aa16.04■□□□□ 0.16
HERPUD1-210ENST00000565966 ASTN1O14525 1302 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 PNMA6FA0A0J9YX94 578 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 KLF18A0A0U1RQI7 1052 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 DNM1LO00429 736 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 ALDH5A1P51649 535 aaPredicted RBP16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 FGD1P98174 961 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 APOBRQ0VD83 1088 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 SLC30A10Q6XR72 485 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 MICU3Q86XE3 530 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 FANCBQ8NB91 859 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 DNERQ8NFT8 737 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 MORC4Q8TE76 937 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 IL17RAQ96F46 866 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 SPZ1Q9BXG8 430 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 UPF3BQ9BZI7 483 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 KATNBL1Q9H079 304 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 XPNPEP3Q9NQH7 507 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 PCDHA1Q9Y5I3 950 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 CYP46A1Q9Y6A2 500 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 KIAA1217Q5T5P2 1943 aa16.03■□□□□ 0.16
HERPUD1-210ENST00000565966 LRRC37A2A6NM11 1700 aa16.02■□□□□ 0.16
HERPUD1-210ENST00000565966 ZBTB43O43298 467 aa16.02■□□□□ 0.16
HERPUD1-210ENST00000565966 PPP1R11O60927 126 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-210ENST00000565966 PLEKHA8P1O95397 391 aa16.02■□□□□ 0.16
HERPUD1-210ENST00000565966 COL6A1P12109 1028 aa16.02■□□□□ 0.16
HERPUD1-210ENST00000565966 CCDC144BQ3MJ40 725 aa16.02■□□□□ 0.16
HERPUD1-210ENST00000565966 GJC2Q5T442 439 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-210ENST00000565966 PRPF38BQ5VTL8 546 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-210ENST00000565966 SRBD1Q8N5C6 995 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-210ENST00000565966 TBC1D5Q92609 795 aa16.02■□□□□ 0.16
HERPUD1-210ENST00000565966 MPHOSPH6Q99547 160 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-210ENST00000565966 B4DLN1 442 aa16.01■□□□□ 0.15
HERPUD1-210ENST00000565966 KBTBD13C9JR72 458 aa16.01■□□□□ 0.15
HERPUD1-210ENST00000565966 DUSP11O75319 330 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-210ENST00000565966 MRPL12P52815 198 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-210ENST00000565966 TOB2Q14106 344 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-210ENST00000565966 LRRC41Q15345 812 aa16.01■□□□□ 0.15
HERPUD1-210ENST00000565966 TMTC3Q6ZXV5 915 aa16.01■□□□□ 0.15
HERPUD1-210ENST00000565966 RNF180Q86T96 592 aa16.01■□□□□ 0.15
HERPUD1-210ENST00000565966 SAMD3Q8N6K7 520 aa16.01■□□□□ 0.15
HERPUD1-210ENST00000565966 RRP36Q96EU6 259 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-210ENST00000565966 SENP6Q9GZR1 1112 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-210ENST00000565966 MAP3K20Q9NYL2 800 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-210ENST00000565966 PGK1P00558 417 aa16■□□□□ 0.15
HERPUD1-210ENST00000565966 CFBP00751 764 aa16■□□□□ 0.15
HERPUD1-210ENST00000565966 MYCNP04198 464 aaPredicted RBP16■□□□□ 0.15
HERPUD1-210ENST00000565966 RCAN1P53805 252 aa16■□□□□ 0.15
HERPUD1-210ENST00000565966 EEPD1Q7L9B9 569 aa16■□□□□ 0.15
HERPUD1-210ENST00000565966 CMTR1Q8N1G2 835 aaKnown RBP16■□□□□ 0.15
HERPUD1-210ENST00000565966 SYTL5Q8TDW5 730 aaPredicted RBP16■□□□□ 0.15
HERPUD1-210ENST00000565966 VTA1Q9NP79 307 aa16■□□□□ 0.15
HERPUD1-210ENST00000565966 FAM217BQ9NTX9 383 aaPredicted RBP16■□□□□ 0.15
HERPUD1-210ENST00000565966 PDRG1Q9NUG6 133 aa16■□□□□ 0.15
HERPUD1-210ENST00000565966 RBM28Q9NW13 759 aaKnown RBP16■□□□□ 0.15
HERPUD1-210ENST00000565966 NAP1L2Q9ULW6 460 aaPredicted RBP16■□□□□ 0.15
HERPUD1-210ENST00000565966 NR2E3Q9Y5X4 410 aa16■□□□□ 0.15
HERPUD1-210ENST00000565966 DDX49Q9Y6V7 483 aaKnown RBP16■□□□□ 0.15
HERPUD1-210ENST00000565966 MYH7BA7E2Y1 1941 aa16■□□□□ 0.15
HERPUD1-210ENST00000565966 GOLGA8AA7E2F4 631 aa15.99■□□□□ 0.15
HERPUD1-210ENST00000565966 GOLGA8BA8MQT2 603 aa15.99■□□□□ 0.15
HERPUD1-210ENST00000565966 OPLAHO14841 1288 aa15.99■□□□□ 0.15
HERPUD1-210ENST00000565966 EVI5O60447 810 aa15.99■□□□□ 0.15
HERPUD1-210ENST00000565966 CDC27P30260 824 aa15.99■□□□□ 0.15
HERPUD1-210ENST00000565966 EVCP57679 992 aa15.99■□□□□ 0.15
HERPUD1-210ENST00000565966 GHRHRQ02643 423 aa15.99■□□□□ 0.15
HERPUD1-210ENST00000565966 TNFAIP2Q03169 654 aa15.99■□□□□ 0.15
HERPUD1-210ENST00000565966 RTN1Q16799 776 aa15.99■□□□□ 0.15
HERPUD1-210ENST00000565966 IQSEC1Q6DN90 963 aa15.99■□□□□ 0.15
HERPUD1-210ENST00000565966 TAPT1Q6NXT6 567 aa15.99■□□□□ 0.15
HERPUD1-210ENST00000565966 FBXO16Q8IX29 292 aaPredicted RBP15.99■□□□□ 0.15
HERPUD1-210ENST00000565966 PIBF1Q8WXW3 757 aa15.99■□□□□ 0.15
HERPUD1-210ENST00000565966 TAAR1Q96RJ0 339 aa15.99■□□□□ 0.15
HERPUD1-210ENST00000565966 SPC25Q9HBM1 224 aa15.99■□□□□ 0.15
HERPUD1-210ENST00000565966 SEC63Q9UGP8 760 aaKnown RBP15.99■□□□□ 0.15
HERPUD1-210ENST00000565966 ADCY6O43306 1168 aa15.98■□□□□ 0.15
HERPUD1-210ENST00000565966 ADAMTS4O75173 837 aa15.98■□□□□ 0.15
HERPUD1-210ENST00000565966 EDNRBP24530 442 aa15.98■□□□□ 0.15
HERPUD1-210ENST00000565966 ADCYAP1R1P41586 468 aa15.98■□□□□ 0.15
HERPUD1-210ENST00000565966 HSD17B4P51659 736 aa15.98■□□□□ 0.15
HERPUD1-210ENST00000565966 PDE4DQ08499 809 aa15.98■□□□□ 0.15
HERPUD1-210ENST00000565966 PPP2R5BQ15173 497 aa15.98■□□□□ 0.15
HERPUD1-210ENST00000565966 DNAH12Q6ZR08 3092 aa15.98■□□□□ 0.15
HERPUD1-210ENST00000565966 CCDC82Q8N4S0 544 aa15.98■□□□□ 0.15
HERPUD1-210ENST00000565966 NSUN6Q8TEA1 469 aaKnown RBP15.98■□□□□ 0.15
HERPUD1-210ENST00000565966 LENG1Q96BZ8 264 aaPredicted RBP15.98■□□□□ 0.15
HERPUD1-210ENST00000565966 IWS1Q96ST2 819 aa15.98■□□□□ 0.15
HERPUD1-210ENST00000565966 RMDN3Q96TC7 470 aa15.98■□□□□ 0.15
HERPUD1-210ENST00000565966 TSEN34Q9BSV6 310 aaKnown RBP15.98■□□□□ 0.15
HERPUD1-210ENST00000565966 PDGFCQ9NRA1 345 aa15.98■□□□□ 0.15
HERPUD1-210ENST00000565966 COL20A1Q9P218 1284 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms