RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 SLC35G1Q2M3R5 365 aa14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 TRIM22Q8IYM9 498 aa14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 FAM177A1Q8N128 213 aaPredicted RBP14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 CUL5Q93034 780 aa14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 IWS1Q96ST2 819 aa14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 RNF26Q9BY78 433 aaPredicted RBP14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 ABHD16BQ9H3Z7 469 aa14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 GCOM1H8Y6P7 765 aaPredicted RBP14.52□□□□□ -0.09
SHCBP1-204ENST00000565887 PFKFB2O60825 505 aa14.52□□□□□ -0.09
SHCBP1-204ENST00000565887 POLR2MP0CAP2 368 aa14.52□□□□□ -0.09
SHCBP1-204ENST00000565887 AK2P54819 239 aa14.52□□□□□ -0.09
SHCBP1-204ENST00000565887 RAB11FIP4Q86YS3 637 aa14.52□□□□□ -0.09
SHCBP1-204ENST00000565887 NSUN6Q8TEA1 469 aaKnown RBP14.52□□□□□ -0.09
SHCBP1-204ENST00000565887 CCDC12Q8WUD4 166 aaPredicted RBP14.52□□□□□ -0.09
SHCBP1-204ENST00000565887 ZSCAN31Q96LW9 406 aaPredicted RBP14.52□□□□□ -0.09
SHCBP1-204ENST00000565887 PAK6Q9NQU5 681 aaPredicted RBP14.52□□□□□ -0.09
SHCBP1-204ENST00000565887 FLRT1Q9NZU1 646 aa14.52□□□□□ -0.09
SHCBP1-204ENST00000565887 LIMCH1Q9UPQ0 1083 aa14.52□□□□□ -0.09
SHCBP1-204ENST00000565887 SOWAHBA6NEL2 793 aa14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 ST18O60284 1047 aa14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 PPP1R11O60927 126 aaPredicted RBP14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 SGPL1O95470 568 aa14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 CFBP00751 764 aa14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 CALML3P27482 149 aa14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 CYP2C19P33261 490 aa14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 GJA8P48165 433 aa14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 HSD17B4P51659 736 aa14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 CCT2P78371 535 aaKnown RBP14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 CNTN2Q02246 1040 aa14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 SSRP1Q08945 709 aaKnown RBP14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 MCTP2Q6DN12 878 aa14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 PPP1R18Q6NYC8 613 aa14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 CMTR1Q8N1G2 835 aaKnown RBP14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 MORC4Q8TE76 937 aa14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 PIBF1Q8WXW3 757 aa14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 TBC1D32Q96NH3 1257 aa14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 UNC93B1Q9H1C4 597 aa14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 PSTPIP2Q9H939 334 aa14.51□□□□□ -0.09
SHCBP1-204ENST00000565887 CNTNAP5Q8WYK1 1306 aa14.5□□□□□ -0.09
SHCBP1-204ENST00000565887 SMCHD1A6NHR9 2005 aa14.5□□□□□ -0.09
SHCBP1-204ENST00000565887 PIK3CDO00329 1044 aa14.5□□□□□ -0.09
SHCBP1-204ENST00000565887 SEPT4O43236 478 aa14.5□□□□□ -0.09
SHCBP1-204ENST00000565887 MCM2P49736 904 aa14.5□□□□□ -0.09
SHCBP1-204ENST00000565887 MTFR1Q15390 333 aa14.5□□□□□ -0.09
SHCBP1-204ENST00000565887 NTRK3Q16288 839 aa14.5□□□□□ -0.09
SHCBP1-204ENST00000565887 PFKFB3Q16875 520 aaPredicted RBP14.5□□□□□ -0.09
SHCBP1-204ENST00000565887 SYTL5Q8TDW5 730 aaPredicted RBP14.5□□□□□ -0.09
SHCBP1-204ENST00000565887 KIF2CQ99661 725 aa14.5□□□□□ -0.09
SHCBP1-204ENST00000565887 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.5□□□□□ -0.09
SHCBP1-204ENST00000565887 BARHL2Q9NY43 387 aa14.5□□□□□ -0.09
SHCBP1-204ENST00000565887 FAM184BQ9ULE4 1060 aa14.5□□□□□ -0.09
SHCBP1-204ENST00000565887 TPCN1Q9ULQ1 816 aa14.5□□□□□ -0.09
SHCBP1-204ENST00000565887 PLXNA1Q9UIW2 1896 aa14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 SNAI1O95863 264 aaPredicted RBP14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 TFRCP02786 760 aaKnown RBP14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 CYBAP13498 195 aa14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 SCG2P13521 617 aa14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 CNGA1P29973 690 aa14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 ALDH5A1P51649 535 aaPredicted RBP14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 ACVR2BQ13705 512 aa14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 ARHGEF16Q5VV41 709 aa14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 IQSEC1Q6DN90 963 aa14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 ARMCX2Q7L311 632 aa14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 HEATR3Q7Z4Q2 680 aa14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 SMARCC2Q8TAQ2 1214 aa14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 WASF1Q92558 559 aa14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 RMDN3Q96TC7 470 aa14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 VTA1Q9NP79 307 aa14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 SH3GLB2Q9NR46 395 aa14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 SH2B1Q9NRF2 756 aaPredicted RBP14.49□□□□□ -0.09
SHCBP1-204ENST00000565887 OPLAHO14841 1288 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 DEXIO95424 95 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 FOSP01100 380 aaPredicted RBP14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 AKR1A1P14550 325 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 XBP1P17861 261 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 GNA11P29992 359 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 NAPAP54920 295 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 PDE4DQ08499 809 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 TRIM32Q13049 653 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 STK3Q13188 491 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 STXBP2Q15833 593 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 XRRA1Q6P2D8 792 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 SLC30A10Q6XR72 485 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 ANKLE1Q8NAG6 615 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 ARRDC4Q8NCT1 418 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 CCDC148Q8NFR7 591 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 BICD2Q8TD16 824 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 U2AF1L4Q8WU68 220 aaKnown RBP14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 TBC1D5Q92609 795 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 FGD4Q96M96 766 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 DEFB118Q96PH6 123 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 LARP6Q9BRS8 491 aaKnown RBP14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 SLC26A6Q9BXS9 759 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 CRISPLD2Q9H0B8 497 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 EHMT1Q9H9B1 1298 aa14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 NCOA5Q9HCD5 579 aaKnown RBP14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 DDX20Q9UHI6 824 aaKnown RBP14.48□□□□□ -0.09
SHCBP1-204ENST00000565887 ESYT2A0FGR8 921 aa14.47□□□□□ -0.09
SHCBP1-204ENST00000565887 EIF3JO75822 258 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms