RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 CALML3P27482 149 aa19.47■□□□□ 0.71
USB1-211ENST00000565662 MCM5P33992 734 aa19.47■□□□□ 0.71
USB1-211ENST00000565662 SNAP25P60880 206 aa19.47■□□□□ 0.71
USB1-211ENST00000565662 PTH1RQ03431 593 aa19.47■□□□□ 0.71
USB1-211ENST00000565662 KCNA10Q16322 511 aa19.47■□□□□ 0.71
USB1-211ENST00000565662 TRIM60Q495X7 471 aa19.47■□□□□ 0.71
USB1-211ENST00000565662 GNASQ5JWF2 1037 aa19.47■□□□□ 0.71
USB1-211ENST00000565662 CLEC4DQ8WXI8 215 aa19.47■□□□□ 0.71
USB1-211ENST00000565662 IWS1Q96ST2 819 aa19.47■□□□□ 0.71
USB1-211ENST00000565662 KLRF2D3W0D1 207 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 ZBTB5O15062 677 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 DDAH1O94760 285 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 ASGR1P07306 291 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 GOLGA8HP0CJ92 632 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 CALM1P0DP23 149 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 CALM2P0DP24 149 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 CALM3P0DP25 149 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 EDNRBP24530 442 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 GNAQP50148 359 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 CPT1AP50416 773 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 USH1GQ495M9 461 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 DUSP28Q4G0W2 176 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 TMEM67Q5HYA8 995 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 CCSAPQ6IQ19 270 aaPredicted RBP19.46■□□□□ 0.71
USB1-211ENST00000565662 NSUN6Q8TEA1 469 aaKnown RBP19.46■□□□□ 0.71
USB1-211ENST00000565662 SCFD2Q8WU76 684 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 FERMT2Q96AC1 680 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 LZTS2Q9BRK4 669 aa19.46■□□□□ 0.71
USB1-211ENST00000565662 GNEQ9Y223 722 aaKnown RBP19.46■□□□□ 0.71
USB1-211ENST00000565662 PALM3A6NDB9 673 aaPredicted RBP19.45■□□□□ 0.7
USB1-211ENST00000565662 SMARCA1P28370 1054 aa19.45■□□□□ 0.7
USB1-211ENST00000565662 GRM4Q14833 912 aa19.45■□□□□ 0.7
USB1-211ENST00000565662 PPP2R5BQ15173 497 aa19.45■□□□□ 0.7
USB1-211ENST00000565662 FSCN1Q16658 493 aaKnown RBP19.45■□□□□ 0.7
USB1-211ENST00000565662 QRICH1Q2TAL8 776 aa19.45■□□□□ 0.7
USB1-211ENST00000565662 CYB5R4Q7L1T6 521 aa19.45■□□□□ 0.7
USB1-211ENST00000565662 CTCFLQ8NI51 663 aaPredicted RBP19.45■□□□□ 0.7
USB1-211ENST00000565662 CCDC136Q96JN2 1154 aa19.45■□□□□ 0.7
USB1-211ENST00000565662 UBA5Q9GZZ9 404 aa19.45■□□□□ 0.7
USB1-211ENST00000565662 ANO2Q9NQ90 1003 aa19.45■□□□□ 0.7
USB1-211ENST00000565662 PRDM5Q9NQX1 630 aaPredicted RBP19.45■□□□□ 0.7
USB1-211ENST00000565662 PDLIM7Q9NR12 457 aa19.45■□□□□ 0.7
USB1-211ENST00000565662 POLR3EQ9NVU0 708 aa19.45■□□□□ 0.7
USB1-211ENST00000565662 RBM47A0AV96 593 aaKnown RBP19.44■□□□□ 0.7
USB1-211ENST00000565662 KPNA6O60684 536 aa19.44■□□□□ 0.7
USB1-211ENST00000565662 GHRHRQ02643 423 aa19.44■□□□□ 0.7
USB1-211ENST00000565662 SLC30A10Q6XR72 485 aa19.44■□□□□ 0.7
USB1-211ENST00000565662 FBXO16Q8IX29 292 aaPredicted RBP19.44■□□□□ 0.7
USB1-211ENST00000565662 MB21D2Q8IYB1 491 aaPredicted RBP19.44■□□□□ 0.7
USB1-211ENST00000565662 MTMR8Q96EF0 704 aa19.44■□□□□ 0.7
USB1-211ENST00000565662 JMJD4Q9H9V9 463 aa19.44■□□□□ 0.7
USB1-211ENST00000565662 MAD2L2Q9UI95 211 aa19.44■□□□□ 0.7
USB1-211ENST00000565662 KIAA0355O15063 1070 aa19.43■□□□□ 0.7
USB1-211ENST00000565662 CDC45O75419 566 aa19.43■□□□□ 0.7
USB1-211ENST00000565662 TLE2Q04725 743 aa19.43■□□□□ 0.7
USB1-211ENST00000565662 KRT32Q14532 448 aa19.43■□□□□ 0.7
USB1-211ENST00000565662 TTLL4Q14679 1199 aa19.43■□□□□ 0.7
USB1-211ENST00000565662 TAPT1Q6NXT6 567 aa19.43■□□□□ 0.7
USB1-211ENST00000565662 VTI1AQ96AJ9 217 aa19.43■□□□□ 0.7
USB1-211ENST00000565662 LENG1Q96BZ8 264 aaPredicted RBP19.43■□□□□ 0.7
USB1-211ENST00000565662 WDR11Q9BZH6 1224 aa19.43■□□□□ 0.7
USB1-211ENST00000565662 LSG1Q9H089 658 aaKnown RBP19.43■□□□□ 0.7
USB1-211ENST00000565662 ASTN1O14525 1302 aa19.43■□□□□ 0.7
USB1-211ENST00000565662 ARVCFO00192 962 aa19.42■□□□□ 0.7
USB1-211ENST00000565662 RAG1P15918 1043 aa19.42■□□□□ 0.7
USB1-211ENST00000565662 LIFRP42702 1097 aa19.42■□□□□ 0.7
USB1-211ENST00000565662 TROAPQ12815 778 aa19.42■□□□□ 0.7
USB1-211ENST00000565662 STXBP2Q15833 593 aa19.42■□□□□ 0.7
USB1-211ENST00000565662 KCNV1Q6PIU1 500 aa19.42■□□□□ 0.7
USB1-211ENST00000565662 TEX2Q8IWB9 1127 aa19.42■□□□□ 0.7
USB1-211ENST00000565662 RIOX1Q9H6W3 641 aa19.42■□□□□ 0.7
USB1-211ENST00000565662 CCDC69A6NI79 296 aa19.41■□□□□ 0.7
USB1-211ENST00000565662 PQBP1O60828 265 aaKnown RBP19.41■□□□□ 0.7
USB1-211ENST00000565662 HMGB1P09429 215 aaKnown RBP19.41■□□□□ 0.7
USB1-211ENST00000565662 SMPD1P17405 629 aa19.41■□□□□ 0.7
USB1-211ENST00000565662 MDM2Q00987 491 aaPredicted RBP19.41■□□□□ 0.7
USB1-211ENST00000565662 SPZ1Q9BXG8 430 aa19.41■□□□□ 0.7
USB1-211ENST00000565662 GPHNQ9NQX3 736 aaPredicted RBP19.41■□□□□ 0.7
USB1-211ENST00000565662 TMEM39AQ9NV64 488 aa19.41■□□□□ 0.7
USB1-211ENST00000565662 SEC63Q9UGP8 760 aaKnown RBP19.41■□□□□ 0.7
USB1-211ENST00000565662 PNMA6FA0A0J9YX94 578 aa19.4■□□□□ 0.7
USB1-211ENST00000565662 SLC27A2O14975 620 aa19.4■□□□□ 0.7
USB1-211ENST00000565662 HSD17B4P51659 736 aa19.4■□□□□ 0.7
USB1-211ENST00000565662 NECTIN1Q15223 517 aa19.4■□□□□ 0.7
USB1-211ENST00000565662 ARHGEF16Q5VV41 709 aa19.4■□□□□ 0.7
USB1-211ENST00000565662 CREB3L3Q68CJ9 461 aa19.4■□□□□ 0.7
USB1-211ENST00000565662 SYNE3Q6ZMZ3 975 aa19.4■□□□□ 0.7
USB1-211ENST00000565662 NFXL1Q6ZNB6 911 aa19.4■□□□□ 0.7
USB1-211ENST00000565662 IGDCC4Q8TDY8 1250 aa19.4■□□□□ 0.7
USB1-211ENST00000565662 RMDN3Q96TC7 470 aa19.4■□□□□ 0.7
USB1-211ENST00000565662 PCDHA1Q9Y5I3 950 aa19.4■□□□□ 0.7
USB1-211ENST00000565662 KIAA1217Q5T5P2 1943 aa19.39■□□□□ 0.7
USB1-211ENST00000565662 RANBP2P49792 3224 aaKnown RBP19.39■□□□□ 0.69
USB1-211ENST00000565662 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.39■□□□□ 0.69
USB1-211ENST00000565662 DYNC1LI2O43237 492 aaPredicted RBP19.39■□□□□ 0.69
USB1-211ENST00000565662 ADCY6O43306 1168 aa19.39■□□□□ 0.69
USB1-211ENST00000565662 EPB41L2O43491 1005 aaKnown RBP19.39■□□□□ 0.69
USB1-211ENST00000565662 PRC1O43663 620 aa19.39■□□□□ 0.69
USB1-211ENST00000565662 STAM2O75886 525 aa19.39■□□□□ 0.69
USB1-211ENST00000565662 CDK7P50613 346 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms