RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 ABRAQ8N0Z2 381 aa29.99■■■□□ 2.39
NME3-208ENST00000565379 GTF3C6Q969F1 213 aa29.99■■■□□ 2.39
NME3-208ENST00000565379 MAML3Q96JK9 1138 aa29.99■■■□□ 2.39
NME3-208ENST00000565379 CPVLQ9H3G5 476 aa29.99■■■□□ 2.39
NME3-208ENST00000565379 SEC63Q9UGP8 760 aaKnown RBP29.99■■■□□ 2.39
NME3-208ENST00000565379 DDX20Q9UHI6 824 aaKnown RBP29.99■■■□□ 2.39
NME3-208ENST00000565379 PNMA6FA0A0J9YX94 578 aa29.98■■■□□ 2.39
NME3-208ENST00000565379 SLC4A3P48751 1232 aa29.98■■■□□ 2.39
NME3-208ENST00000565379 SNRNP48Q6IEG0 339 aaKnown RBP29.98■■■□□ 2.39
NME3-208ENST00000565379 C7orf61Q8IZ16 206 aa29.98■■■□□ 2.39
NME3-208ENST00000565379 COL6A1P12109 1028 aa29.97■■■□□ 2.39
NME3-208ENST00000565379 FUT2Q10981 343 aa29.97■■■□□ 2.39
NME3-208ENST00000565379 CPXCR1Q8N123 301 aa29.97■■■□□ 2.39
NME3-208ENST00000565379 RAVER2Q9HCJ3 691 aaKnown RBP29.97■■■□□ 2.39
NME3-208ENST00000565379 AKAP17AQ02040 695 aaKnown RBP29.96■■■□□ 2.39
NME3-208ENST00000565379 NTRK3Q16288 839 aa29.96■■■□□ 2.39
NME3-208ENST00000565379 SLC35G1Q2M3R5 365 aa29.96■■■□□ 2.39
NME3-208ENST00000565379 QRICH1Q2TAL8 776 aa29.96■■■□□ 2.39
NME3-208ENST00000565379 CCDC174Q6PII3 467 aa29.96■■■□□ 2.39
NME3-208ENST00000565379 TRIM22Q8IYM9 498 aa29.96■■■□□ 2.39
NME3-208ENST00000565379 SNX21Q969T3 373 aa29.96■■■□□ 2.39
NME3-208ENST00000565379 AMNQ9BXJ7 453 aa29.96■■■□□ 2.39
NME3-208ENST00000565379 RNF26Q9BY78 433 aaPredicted RBP29.96■■■□□ 2.39
NME3-208ENST00000565379 NCOA5Q9HCD5 579 aaKnown RBP29.96■■■□□ 2.39
NME3-208ENST00000565379 ZMYND8Q9ULU4 1186 aaPredicted RBP29.96■■■□□ 2.39
NME3-208ENST00000565379 ZNF536O15090 1300 aa29.96■■■□□ 2.39
NME3-208ENST00000565379 CNTNAP5Q8WYK1 1306 aa29.96■■■□□ 2.39
NME3-208ENST00000565379 FBXO11Q86XK2 927 aa29.95■■■□□ 2.39
NME3-208ENST00000565379 CMTR1Q8N1G2 835 aaKnown RBP29.95■■■□□ 2.39
NME3-208ENST00000565379 PIGSQ96S52 555 aa29.95■■■□□ 2.39
NME3-208ENST00000565379 FBXO40Q9UH90 709 aa29.95■■■□□ 2.39
NME3-208ENST00000565379 CCPG1Q9ULG6 757 aa29.95■■■□□ 2.39
NME3-208ENST00000565379 LARGE1O95461 756 aa29.94■■■□□ 2.38
NME3-208ENST00000565379 ZNF792Q3KQV3 632 aa29.94■■■□□ 2.38
NME3-208ENST00000565379 HOMER1Q86YM7 354 aa29.94■■■□□ 2.38
NME3-208ENST00000565379 CCDC82Q8N4S0 544 aa29.94■■■□□ 2.38
NME3-208ENST00000565379 CHST13Q8NET6 341 aa29.94■■■□□ 2.38
NME3-208ENST00000565379 LLPHQ9BRT6 129 aaKnown RBP29.94■■■□□ 2.38
NME3-208ENST00000565379 MAF1Q9H063 256 aa29.94■■■□□ 2.38
NME3-208ENST00000565379 PLXNA1Q9UIW2 1896 aa29.93■■■□□ 2.38
NME3-208ENST00000565379 hCG_1984214I3L0E3 225 aa29.93■■■□□ 2.38
NME3-208ENST00000565379 PRPF3O43395 683 aaKnown RBP29.93■■■□□ 2.38
NME3-208ENST00000565379 TAL1P17542 331 aaPredicted RBP29.93■■■□□ 2.38
NME3-208ENST00000565379 SNAP25P60880 206 aa29.93■■■□□ 2.38
NME3-208ENST00000565379 SSRP1Q08945 709 aaKnown RBP29.93■■■□□ 2.38
NME3-208ENST00000565379 KCTD2Q14681 263 aa29.93■■■□□ 2.38
NME3-208ENST00000565379 ZNF713Q8N859 430 aaPredicted RBP29.93■■■□□ 2.38
NME3-208ENST00000565379 V9GY48 417 aaPredicted RBP29.93■■■□□ 2.38
NME3-208ENST00000565379 SZT2Q5T011 3432 aa29.93■■■□□ 2.38
NME3-208ENST00000565379 ABCB11O95342 1321 aa29.93■■■□□ 2.38
NME3-208ENST00000565379 CD2BP2O95400 341 aaKnown RBP29.92■■■□□ 2.38
NME3-208ENST00000565379 LRRC26Q2I0M4 334 aa29.92■■■□□ 2.38
NME3-208ENST00000565379 NECAB1Q8N987 351 aa29.92■■■□□ 2.38
NME3-208ENST00000565379 TMX3Q96JJ7 454 aa29.92■■■□□ 2.38
NME3-208ENST00000565379 AGBL1Q96MI9 1066 aa29.92■■■□□ 2.38
NME3-208ENST00000565379 SYN1P17600 705 aa29.91■■■□□ 2.38
NME3-208ENST00000565379 BMP8BP34820 402 aa29.91■■■□□ 2.38
NME3-208ENST00000565379 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.91■■■□□ 2.38
NME3-208ENST00000565379 SLC5A4Q9NY91 659 aa29.91■■■□□ 2.38
NME3-208ENST00000565379 SMCHD1A6NHR9 2005 aa29.9■■■□□ 2.38
NME3-208ENST00000565379 GJC2Q5T442 439 aaPredicted RBP29.9■■■□□ 2.38
NME3-208ENST00000565379 GDF15Q99988 308 aa29.9■■■□□ 2.38
NME3-208ENST00000565379 SLC26A6Q9BXS9 759 aa29.9■■■□□ 2.38
NME3-208ENST00000565379 MRPL11Q9Y3B7 192 aaKnown RBP29.9■■■□□ 2.38
NME3-208ENST00000565379 PCDHA1Q9Y5I3 950 aa29.9■■■□□ 2.38
NME3-208ENST00000565379 STK36Q9NRP7 1315 aa29.9■■■□□ 2.38
NME3-208ENST00000565379 ALAS1P13196 640 aa29.89■■■□□ 2.38
NME3-208ENST00000565379 LENG1Q96BZ8 264 aaPredicted RBP29.89■■■□□ 2.38
NME3-208ENST00000565379 TRERF1Q96PN7 1200 aa29.89■■■□□ 2.38
NME3-208ENST00000565379 ACAD9Q9H845 621 aa29.89■■■□□ 2.38
NME3-208ENST00000565379 HOMER2Q9NSB8 354 aa29.89■■■□□ 2.38
NME3-208ENST00000565379 SEPT4O43236 478 aa29.88■■■□□ 2.37
NME3-208ENST00000565379 DEXIO95424 95 aa29.88■■■□□ 2.37
NME3-208ENST00000565379 PFKFB3Q16875 520 aaPredicted RBP29.88■■■□□ 2.37
NME3-208ENST00000565379 CCDC83Q8IWF9 413 aa29.88■■■□□ 2.37
NME3-208ENST00000565379 HSCBQ8IWL3 235 aa29.88■■■□□ 2.37
NME3-208ENST00000565379 PIBF1Q8WXW3 757 aa29.88■■■□□ 2.37
NME3-208ENST00000565379 WASF1Q92558 559 aa29.88■■■□□ 2.37
NME3-208ENST00000565379 PHKBQ93100 1093 aa29.88■■■□□ 2.37
NME3-208ENST00000565379 FGD4Q96M96 766 aa29.88■■■□□ 2.37
NME3-208ENST00000565379 TINF2Q9BSI4 451 aa29.88■■■□□ 2.37
NME3-208ENST00000565379 RNF146Q9NTX7 359 aa29.88■■■□□ 2.37
NME3-208ENST00000565379 LAMA3Q16787 3333 aa29.87■■■□□ 2.37
NME3-208ENST00000565379 K7ELQ4 463 aaPredicted RBP29.87■■■□□ 2.37
NME3-208ENST00000565379 MSCO60682 206 aa29.87■■■□□ 2.37
NME3-208ENST00000565379 USH1GQ495M9 461 aa29.87■■■□□ 2.37
NME3-208ENST00000565379 MCF2L2Q86YR7 1114 aa29.87■■■□□ 2.37
NME3-208ENST00000565379 TEX2Q8IWB9 1127 aa29.87■■■□□ 2.37
NME3-208ENST00000565379 FAM177A1Q8N128 213 aaPredicted RBP29.87■■■□□ 2.37
NME3-208ENST00000565379 SAMD3Q8N6K7 520 aa29.87■■■□□ 2.37
NME3-208ENST00000565379 SENP6Q9GZR1 1112 aaPredicted RBP29.87■■■□□ 2.37
NME3-208ENST00000565379 DNAJC25-GNG10A0A024R161 153 aa29.86■■■□□ 2.37
NME3-208ENST00000565379 PPP1R11O60927 126 aaPredicted RBP29.86■■■□□ 2.37
NME3-208ENST00000565379 MYCNP04198 464 aaPredicted RBP29.86■■■□□ 2.37
NME3-208ENST00000565379 SCG2P13521 617 aa29.86■■■□□ 2.37
NME3-208ENST00000565379 PPP1R18Q6NYC8 613 aa29.86■■■□□ 2.37
NME3-208ENST00000565379 RGS22Q8NE09 1264 aa29.86■■■□□ 2.37
NME3-208ENST00000565379 NSUN7Q8NE18 718 aaKnown RBP29.86■■■□□ 2.37
NME3-208ENST00000565379 BAZ2BQ9UIF8 2168 aaKnown RBP29.86■■■□□ 2.37
NME3-208ENST00000565379 CTDNEP1O95476 244 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 464 ms