RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 SEC13P55735 322 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 SLC7A5Q01650 507 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 MECOMQ03112 1051 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 TMED1Q13445 227 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 FKBP5Q13451 457 aaPredicted RBP5.89□□□□□ -1.47
CAPN3-214ENST00000565274 TAF11Q15544 211 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 TMEM95Q3KNT9 176 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 AKAP4Q5JQC9 854 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 PERM1Q5SV97 790 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 BEND3Q5T5X7 828 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 LCE3BQ5TA77 95 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 JAKMIP3Q5VZ66 844 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 ELMSAN1Q6PJG2 1045 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 HFE2Q6ZVN8 426 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 WFDC8Q8IUA0 241 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 KCNH5Q8NCM2 988 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 PI4K2BQ8TCG2 481 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 HELQQ8TDG4 1101 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 PIBF1Q8WXW3 757 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 CCDC34Q96HJ3 373 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 RNPC3Q96LT9 517 aaKnown RBP5.89□□□□□ -1.47
CAPN3-214ENST00000565274 SLC26A8Q96RN1 970 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 IWS1Q96ST2 819 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 NOL10Q9BSC4 688 aaKnown RBP5.89□□□□□ -1.47
CAPN3-214ENST00000565274 IER2Q9BTL4 223 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 SSBP4Q9BWG4 385 aaPredicted RBP5.89□□□□□ -1.47
CAPN3-214ENST00000565274 XPO4Q9C0E2 1151 aaKnown RBP5.89□□□□□ -1.47
CAPN3-214ENST00000565274 ZSWIM4Q9H7M6 989 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 TRMT1Q9NXH9 659 aaKnown RBP5.89□□□□□ -1.47
CAPN3-214ENST00000565274 KLK14Q9P0G3 267 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 BCS1LQ9Y276 419 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 MRPL42Q9Y6G3 142 aaKnown RBP5.89□□□□□ -1.47
CAPN3-214ENST00000565274 IKBKGQ9Y6K9 419 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.89□□□□□ -1.47
CAPN3-214ENST00000565274 WDR33Q9C0J8 1336 aaKnown RBP5.89□□□□□ -1.47
CAPN3-214ENST00000565274 NFAT5O94916 1531 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 CRYBG1Q9Y4K1 1723 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 CCDC163A0A0D9SF12 145 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 A0A1W2PRQ8 180 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 SHTN1A0MZ66 631 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 C19orf81C9J6K1 198 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 TGFBR3LH3BV60 316 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 GLRX3O76003 335 aaKnown RBP5.88□□□□□ -1.47
CAPN3-214ENST00000565274 DKK1O94907 266 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 IL4RP24394 825 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 GUCY2CP25092 1073 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 PSMA3P25788 255 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 TARSP26639 723 aaKnown RBP5.88□□□□□ -1.47
CAPN3-214ENST00000565274 KCNJ4P48050 445 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 CEBPAP49715 358 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-214ENST00000565274 GTF2A1P52655 376 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-214ENST00000565274 RBM6P78332 1123 aaKnown RBP5.88□□□□□ -1.47
CAPN3-214ENST00000565274 TRDNQ13061 729 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 PPP2R5BQ15173 497 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 RTN1Q16799 776 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 COBLL1Q53SF7 1204 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 AGAP9Q5VTM2 703 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 ALKBH2Q6NS38 261 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 CCBE1Q6UXH8 406 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-214ENST00000565274 TRIM74Q86UV6 250 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 TRIM73Q86UV7 250 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 TAX1BP1Q86VP1 789 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 FBXO11Q86XK2 927 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 PAF1Q8N7H5 531 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 GABPB2Q8TAK5 448 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-214ENST00000565274 ZFPM2Q8WW38 1151 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 ATRIPQ8WXE1 791 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 TMEM87BQ96K49 555 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 LPIN3Q9BQK8 851 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 LSG1Q9H089 658 aaKnown RBP5.88□□□□□ -1.47
CAPN3-214ENST00000565274 LGR6Q9HBX8 967 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 MIS18AQ9NYP9 233 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 HDAC9Q9UKV0 1011 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 SUFUQ9UMX1 484 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 EXOC6BQ9Y2D4 811 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.88□□□□□ -1.47
CAPN3-214ENST00000565274 N6AMT1Q9Y5N5 214 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 LRRFIP2Q9Y608 721 aaKnown RBP5.88□□□□□ -1.47
CAPN3-214ENST00000565274 COL15A1P39059 1388 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 TMEM94Q12767 1356 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 RPAP1Q9BWH6 1393 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-214ENST00000565274 ADAMTSL3P82987 1691 aa5.88□□□□□ -1.47
CAPN3-214ENST00000565274 ZBTB42B2RXF5 422 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 H0YHG0 523 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 CAND2O75155 1236 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 SASH3O75995 380 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 EPB42P16452 691 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 KCNA6P17658 529 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 GRNP28799 593 aaKnown RBP5.87□□□□□ -1.47
CAPN3-214ENST00000565274 IDH3AP50213 366 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 GPSM2P81274 684 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 SARNPP82979 210 aaKnown RBP5.87□□□□□ -1.47
CAPN3-214ENST00000565274 RAPGEF1Q13905 1077 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.87□□□□□ -1.47
CAPN3-214ENST00000565274 PLEKHO1Q53GL0 409 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-214ENST00000565274 ODR4Q5SWX8 454 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 CCDC183Q5T5S1 534 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 C10orf62Q5T681 223 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-214ENST00000565274 IER5Q5VY09 327 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 SLC4A10Q6U841 1118 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms