RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 LBHD1Q9BQE6 289 aaPredicted RBP15.88■□□□□ 0.13
VPS9D1-204ENST00000565023 GPHNQ9NQX3 736 aaPredicted RBP15.88■□□□□ 0.13
VPS9D1-204ENST00000565023 STARD7Q9NQZ5 370 aa15.88■□□□□ 0.13
VPS9D1-204ENST00000565023 MAD2L2Q9UI95 211 aa15.88■□□□□ 0.13
VPS9D1-204ENST00000565023 PNMA2Q9UL42 364 aa15.88■□□□□ 0.13
VPS9D1-204ENST00000565023 SLC27A2O14975 620 aa15.87■□□□□ 0.13
VPS9D1-204ENST00000565023 CDC45O75419 566 aa15.87■□□□□ 0.13
VPS9D1-204ENST00000565023 SMPD1P17405 629 aa15.87■□□□□ 0.13
VPS9D1-204ENST00000565023 TLE2Q04725 743 aa15.87■□□□□ 0.13
VPS9D1-204ENST00000565023 MB21D2Q8IYB1 491 aaPredicted RBP15.87■□□□□ 0.13
VPS9D1-204ENST00000565023 KLHDC9Q8NEP7 349 aa15.87■□□□□ 0.13
VPS9D1-204ENST00000565023 MYL10Q9BUA6 226 aa15.87■□□□□ 0.13
VPS9D1-204ENST00000565023 ABCB11O95342 1321 aa15.87■□□□□ 0.13
VPS9D1-204ENST00000565023 LTBP2Q14767 1821 aa15.87■□□□□ 0.13
VPS9D1-204ENST00000565023 DYNC1LI2O43237 492 aaPredicted RBP15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 PRC1O43663 620 aa15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 ASGR1P07306 291 aa15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 GJA9P57773 515 aa15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 PDE4DQ08499 809 aa15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 GRM4Q14833 912 aa15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 CREB3L3Q68CJ9 461 aa15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 TAPT1Q6NXT6 567 aa15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 CASC1Q6TDU7 716 aa15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 SH3RF1Q7Z6J0 888 aa15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 TLK2Q86UE8 772 aa15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 RAB11FIP4Q86YS3 637 aa15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 GLT1D1Q96MS3 346 aa15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 TSEN34Q9BSV6 310 aaKnown RBP15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 AP5M1Q9H0R1 490 aa15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 VTA1Q9NP79 307 aa15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 VCANP13611 3396 aa15.86■□□□□ 0.13
VPS9D1-204ENST00000565023 CFBP00751 764 aa15.85■□□□□ 0.13
VPS9D1-204ENST00000565023 COL9A3Q14050 684 aaPredicted RBP15.85■□□□□ 0.13
VPS9D1-204ENST00000565023 SNX17Q15036 470 aa15.85■□□□□ 0.13
VPS9D1-204ENST00000565023 NFXL1Q6ZNB6 911 aa15.85■□□□□ 0.13
VPS9D1-204ENST00000565023 CATIPQ7Z7H3 387 aa15.85■□□□□ 0.13
VPS9D1-204ENST00000565023 PCSK9Q8NBP7 692 aaKnown RBP15.85■□□□□ 0.13
VPS9D1-204ENST00000565023 TAAR1Q96RJ0 339 aa15.85■□□□□ 0.13
VPS9D1-204ENST00000565023 PIGSQ96S52 555 aa15.85■□□□□ 0.13
VPS9D1-204ENST00000565023 LRRC2Q9BYS8 371 aa15.85■□□□□ 0.13
VPS9D1-204ENST00000565023 UPF3AQ9H1J1 476 aaKnown RBP15.85■□□□□ 0.13
VPS9D1-204ENST00000565023 PDLIM7Q9NR12 457 aa15.85■□□□□ 0.13
VPS9D1-204ENST00000565023 MRPL11Q9Y3B7 192 aaKnown RBP15.85■□□□□ 0.13
VPS9D1-204ENST00000565023 PALM3A6NDB9 673 aaPredicted RBP15.84■□□□□ 0.13
VPS9D1-204ENST00000565023 MOXD2PA6NHM9 499 aa15.84■□□□□ 0.13
VPS9D1-204ENST00000565023 SOX1O00570 391 aaPredicted RBP15.84■□□□□ 0.13
VPS9D1-204ENST00000565023 BMP8BP34820 402 aa15.84■□□□□ 0.13
VPS9D1-204ENST00000565023 IQSEC1Q6DN90 963 aa15.84■□□□□ 0.13
VPS9D1-204ENST00000565023 CCSAPQ6IQ19 270 aaPredicted RBP15.84■□□□□ 0.13
VPS9D1-204ENST00000565023 CXCL17Q6UXB2 119 aa15.84■□□□□ 0.13
VPS9D1-204ENST00000565023 IGDCC4Q8TDY8 1250 aa15.84■□□□□ 0.13
VPS9D1-204ENST00000565023 LRCH3Q96II8 777 aa15.84■□□□□ 0.13
VPS9D1-204ENST00000565023 MPHOSPH6Q99547 160 aaKnown RBP15.84■□□□□ 0.13
VPS9D1-204ENST00000565023 AMNQ9BXJ7 453 aa15.84■□□□□ 0.13
VPS9D1-204ENST00000565023 WDR11Q9BZH6 1224 aa15.84■□□□□ 0.13
VPS9D1-204ENST00000565023 COL20A1Q9P218 1284 aa15.84■□□□□ 0.13
VPS9D1-204ENST00000565023 GNEQ9Y223 722 aaKnown RBP15.84■□□□□ 0.13
VPS9D1-204ENST00000565023 TRIM43BA6NCK2 446 aa15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 CCDC69A6NI79 296 aa15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 ZBTB5O15062 677 aa15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 CTAGE5O15320 804 aa15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 PPP1R11O60927 126 aaPredicted RBP15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 CLTBP09497 229 aa15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 RXRAP19793 462 aa15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 CST5P28325 142 aaPredicted RBP15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 NECTIN1Q15223 517 aa15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 FSCN1Q16658 493 aaKnown RBP15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 SLC35G1Q2M3R5 365 aa15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 MCF2L2Q86YR7 1114 aa15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 TDHQ8IZJ6 230 aa15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 ZNF654Q8IZM8 581 aa15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 SYTL5Q8TDW5 730 aaPredicted RBP15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 MORC4Q8TE76 937 aa15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 BADQ92934 168 aa15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 TRIM43Q96BQ3 446 aaPredicted RBP15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 LY9Q9HBG7 655 aa15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 TMEM39AQ9NV64 488 aa15.83■□□□□ 0.12
VPS9D1-204ENST00000565023 DCDC2CA8MYV0 355 aa15.82■□□□□ 0.12
VPS9D1-204ENST00000565023 EIF2AK2P19525 551 aaKnown RBP15.82■□□□□ 0.12
VPS9D1-204ENST00000565023 MCM5P33992 734 aa15.82■□□□□ 0.12
VPS9D1-204ENST00000565023 TROAPQ12815 778 aa15.82■□□□□ 0.12
VPS9D1-204ENST00000565023 ARHGEF16Q5VV41 709 aa15.82■□□□□ 0.12
VPS9D1-204ENST00000565023 SEPT14Q6ZU15 432 aa15.82■□□□□ 0.12
VPS9D1-204ENST00000565023 DNERQ8NFT8 737 aa15.82■□□□□ 0.12
VPS9D1-204ENST00000565023 OR6J1Q8NGC5 347 aa15.82■□□□□ 0.12
VPS9D1-204ENST00000565023 CTCFLQ8NI51 663 aaPredicted RBP15.82■□□□□ 0.12
VPS9D1-204ENST00000565023 COPS5Q92905 334 aa15.82■□□□□ 0.12
VPS9D1-204ENST00000565023 PCDHA1Q9Y5I3 950 aa15.82■□□□□ 0.12
VPS9D1-204ENST00000565023 KIAA1217Q5T5P2 1943 aa15.82■□□□□ 0.12
VPS9D1-204ENST00000565023 A0A0U1RQG5 324 aaPredicted RBP15.81■□□□□ 0.12
VPS9D1-204ENST00000565023 A0A1W2PPC1 479 aa15.81■□□□□ 0.12
VPS9D1-204ENST00000565023 B4DLN1 442 aa15.81■□□□□ 0.12
VPS9D1-204ENST00000565023 SH2B2O14492 632 aaPredicted RBP15.81■□□□□ 0.12
VPS9D1-204ENST00000565023 CYTH3O43739 400 aa15.81■□□□□ 0.12
VPS9D1-204ENST00000565023 MYL3P08590 195 aa15.81■□□□□ 0.12
VPS9D1-204ENST00000565023 RAG1P15918 1043 aa15.81■□□□□ 0.12
VPS9D1-204ENST00000565023 HOXA13P31271 388 aaPredicted RBP15.81■□□□□ 0.12
VPS9D1-204ENST00000565023 MRPL12P52815 198 aaKnown RBP15.81■□□□□ 0.12
VPS9D1-204ENST00000565023 PSMC6P62333 389 aa15.81■□□□□ 0.12
VPS9D1-204ENST00000565023 PPP2R5BQ15173 497 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms