RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 SGSM2O43147 1006 aa11.73□□□□□ -0.53
CMTM3-209ENST00000565003 PARP1P09874 1014 aaKnown RBP11.73□□□□□ -0.53
CMTM3-209ENST00000565003 CDK7P50613 346 aa11.73□□□□□ -0.53
CMTM3-209ENST00000565003 SHHQ15465 462 aa11.73□□□□□ -0.53
CMTM3-209ENST00000565003 IFIT1BQ5T764 474 aaKnown RBP11.73□□□□□ -0.53
CMTM3-209ENST00000565003 IQSEC1Q6DN90 963 aa11.73□□□□□ -0.53
CMTM3-209ENST00000565003 CXCL17Q6UXB2 119 aa11.73□□□□□ -0.53
CMTM3-209ENST00000565003 STAG2Q8N3U4 1231 aa11.73□□□□□ -0.53
CMTM3-209ENST00000565003 TMEM39AQ9NV64 488 aa11.73□□□□□ -0.53
CMTM3-209ENST00000565003 LOC102724159A0A0B4J2E5 919 aa11.72□□□□□ -0.53
CMTM3-209ENST00000565003 A0A0U1RQG5 324 aaPredicted RBP11.72□□□□□ -0.53
CMTM3-209ENST00000565003 DYNC1LI2O43237 492 aaPredicted RBP11.72□□□□□ -0.53
CMTM3-209ENST00000565003 RAG1P15918 1043 aa11.72□□□□□ -0.53
CMTM3-209ENST00000565003 EDNRBP24530 442 aa11.72□□□□□ -0.53
CMTM3-209ENST00000565003 EPHB4P54760 987 aa11.72□□□□□ -0.53
CMTM3-209ENST00000565003 MAPK8IP2Q13387 824 aaPredicted RBP11.72□□□□□ -0.53
CMTM3-209ENST00000565003 PWP2Q15269 919 aaKnown RBP11.72□□□□□ -0.53
CMTM3-209ENST00000565003 FSCN1Q16658 493 aaKnown RBP11.72□□□□□ -0.53
CMTM3-209ENST00000565003 QRICH1Q2TAL8 776 aa11.72□□□□□ -0.53
CMTM3-209ENST00000565003 KIAA1211Q6ZU35 1233 aa11.72□□□□□ -0.53
CMTM3-209ENST00000565003 STOX1Q6ZVD7 989 aa11.72□□□□□ -0.53
CMTM3-209ENST00000565003 FAM126BQ8IXS8 530 aa11.72□□□□□ -0.53
CMTM3-209ENST00000565003 DEFB123Q8N688 67 aa11.72□□□□□ -0.53
CMTM3-209ENST00000565003 VTI1AQ96AJ9 217 aa11.72□□□□□ -0.53
CMTM3-209ENST00000565003 AP5M1Q9H0R1 490 aa11.72□□□□□ -0.53
CMTM3-209ENST00000565003 JMJD4Q9H9V9 463 aa11.72□□□□□ -0.53
CMTM3-209ENST00000565003 TBX21Q9UL17 535 aa11.72□□□□□ -0.53
CMTM3-209ENST00000565003 U3KPZ7 1027 aaPredicted RBP11.72□□□□□ -0.53
CMTM3-209ENST00000565003 GRIN2DO15399 1336 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 ABCB11O95342 1321 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 MROH7Q68CQ1 1323 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 RBM47A0AV96 593 aaKnown RBP11.71□□□□□ -0.53
CMTM3-209ENST00000565003 E7EWF7 191 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 ARVCFO00192 962 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 DHX16O60231 1041 aaKnown RBP11.71□□□□□ -0.53
CMTM3-209ENST00000565003 TRDNQ13061 729 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 DUSP28Q4G0W2 176 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 SKAP1Q86WV1 359 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 RGS22Q8NE09 1264 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 DNERQ8NFT8 737 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 TBC1D5Q92609 795 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 WDR11Q9BZH6 1224 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 SENP2Q9HC62 589 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 VAT1LQ9HCJ6 419 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 COL20A1Q9P218 1284 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 MAD2L2Q9UI95 211 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 Q9Y3F1 56 aa11.71□□□□□ -0.53
CMTM3-209ENST00000565003 CABYRO75952 493 aa11.7□□□□□ -0.54
CMTM3-209ENST00000565003 CD4P01730 458 aa11.7□□□□□ -0.54
CMTM3-209ENST00000565003 ANTXR2P58335 489 aa11.7□□□□□ -0.54
CMTM3-209ENST00000565003 PSMC6P62333 389 aa11.7□□□□□ -0.54
CMTM3-209ENST00000565003 FPGSQ05932 587 aa11.7□□□□□ -0.54
CMTM3-209ENST00000565003 PDE4DQ08499 809 aa11.7□□□□□ -0.54
CMTM3-209ENST00000565003 SLC35G1Q2M3R5 365 aa11.7□□□□□ -0.54
CMTM3-209ENST00000565003 CHST3Q7LGC8 479 aa11.7□□□□□ -0.54
CMTM3-209ENST00000565003 SLC43A3Q8NBI5 491 aa11.7□□□□□ -0.54
CMTM3-209ENST00000565003 SYTL5Q8TDW5 730 aaPredicted RBP11.7□□□□□ -0.54
CMTM3-209ENST00000565003 MAP4K1Q92918 833 aa11.7□□□□□ -0.54
CMTM3-209ENST00000565003 MYH6P13533 1939 aa11.7□□□□□ -0.54
CMTM3-209ENST00000565003 PALM3A6NDB9 673 aaPredicted RBP11.69□□□□□ -0.54
CMTM3-209ENST00000565003 KLRF2D3W0D1 207 aa11.69□□□□□ -0.54
CMTM3-209ENST00000565003 OPLAHO14841 1288 aa11.69□□□□□ -0.54
CMTM3-209ENST00000565003 IFIT3O14879 490 aaKnown RBP11.69□□□□□ -0.54
CMTM3-209ENST00000565003 PPP1R11O60927 126 aaPredicted RBP11.69□□□□□ -0.54
CMTM3-209ENST00000565003 TIMP1P01033 207 aa11.69□□□□□ -0.54
CMTM3-209ENST00000565003 ITGA7Q13683 1181 aa11.69□□□□□ -0.54
CMTM3-209ENST00000565003 RALYLQ86SE5 291 aaKnown RBP11.69□□□□□ -0.54
CMTM3-209ENST00000565003 FBXO11Q86XK2 927 aa11.69□□□□□ -0.54
CMTM3-209ENST00000565003 MB21D2Q8IYB1 491 aaPredicted RBP11.69□□□□□ -0.54
CMTM3-209ENST00000565003 OR6J1Q8NGC5 347 aa11.69□□□□□ -0.54
CMTM3-209ENST00000565003 NCOA7Q8NI08 942 aa11.69□□□□□ -0.54
CMTM3-209ENST00000565003 MTMR8Q96EF0 704 aa11.69□□□□□ -0.54
CMTM3-209ENST00000565003 TAAR1Q96RJ0 339 aa11.69□□□□□ -0.54
CMTM3-209ENST00000565003 MTMR10Q9NXD2 777 aa11.69□□□□□ -0.54
CMTM3-209ENST00000565003 RBM8AQ9Y5S9 174 aaKnown RBP11.69□□□□□ -0.54
CMTM3-209ENST00000565003 ZEB2O60315 1214 aa11.68□□□□□ -0.54
CMTM3-209ENST00000565003 B4GALT4O60513 344 aa11.68□□□□□ -0.54
CMTM3-209ENST00000565003 ARIH2O95376 493 aa11.68□□□□□ -0.54
CMTM3-209ENST00000565003 TROAPQ12815 778 aa11.68□□□□□ -0.54
CMTM3-209ENST00000565003 COL9A3Q14050 684 aaPredicted RBP11.68□□□□□ -0.54
CMTM3-209ENST00000565003 GRM4Q14833 912 aa11.68□□□□□ -0.54
CMTM3-209ENST00000565003 WTAPQ15007 396 aa11.68□□□□□ -0.54
CMTM3-209ENST00000565003 PPP2R5BQ15173 497 aa11.68□□□□□ -0.54
CMTM3-209ENST00000565003 MFSD5Q6N075 450 aa11.68□□□□□ -0.54
CMTM3-209ENST00000565003 MCF2L2Q86YR7 1114 aa11.68□□□□□ -0.54
CMTM3-209ENST00000565003 SCFD2Q8WU76 684 aa11.68□□□□□ -0.54
CMTM3-209ENST00000565003 COPS5Q92905 334 aa11.68□□□□□ -0.54
CMTM3-209ENST00000565003 RNPC3Q96LT9 517 aaKnown RBP11.68□□□□□ -0.54
CMTM3-209ENST00000565003 MPHOSPH6Q99547 160 aaKnown RBP11.68□□□□□ -0.54
CMTM3-209ENST00000565003 AMNQ9BXJ7 453 aa11.68□□□□□ -0.54
CMTM3-209ENST00000565003 PPP1R12CQ9BZL4 782 aa11.68□□□□□ -0.54
CMTM3-209ENST00000565003 MAF1Q9H063 256 aa11.68□□□□□ -0.54
CMTM3-209ENST00000565003 LSG1Q9H089 658 aaKnown RBP11.68□□□□□ -0.54
CMTM3-209ENST00000565003 MRPL11Q9Y3B7 192 aaKnown RBP11.68□□□□□ -0.54
CMTM3-209ENST00000565003 ERICH2A1L162 156 aa11.67□□□□□ -0.54
CMTM3-209ENST00000565003 ZBTB5O15062 677 aa11.67□□□□□ -0.54
CMTM3-209ENST00000565003 TLR3O15455 904 aaKnown RBP11.67□□□□□ -0.54
CMTM3-209ENST00000565003 CYTH3O43739 400 aa11.67□□□□□ -0.54
CMTM3-209ENST00000565003 CFBP00751 764 aa11.67□□□□□ -0.54
CMTM3-209ENST00000565003 CSF2RAP15509 400 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms