RNA–Protein interactions for RNA: ENST00000564968.1

CLCN7-208, Transcript of chloride voltage-gated channel 7, human

TSL 4

Gene CLCN7, Length 652 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCN7-208	ENST00000564968	MYL3	P08590	195 aa		18.83	■□□□□ 0.6
CLCN7-208	ENST00000564968	CYP2C9	P11712	490 aa		18.83	■□□□□ 0.6
CLCN7-208	ENST00000564968	SKIV2L	Q15477	1246 aa	Known RBP	18.83	■□□□□ 0.6
CLCN7-208	ENST00000564968	FAM47C	Q5HY64	1035 aa		18.83	■□□□□ 0.6
CLCN7-208	ENST00000564968	ZMYM1	Q5SVZ6	1142 aa		18.83	■□□□□ 0.6
CLCN7-208	ENST00000564968	RCSD1	Q6JBY9	416 aa		18.83	■□□□□ 0.6
CLCN7-208	ENST00000564968	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	18.83	■□□□□ 0.6
CLCN7-208	ENST00000564968	DCTPP1	Q9H773	170 aa		18.83	■□□□□ 0.6
CLCN7-208	ENST00000564968	TOMM22	Q9NS69	142 aa		18.83	■□□□□ 0.6
CLCN7-208	ENST00000564968	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
CLCN7-208	ENST00000564968	PRRC2B	Q5JSZ5	2229 aa	Known RBP	18.83	■□□□□ 0.6
CLCN7-208	ENST00000564968	SCN10A	Q9Y5Y9	1956 aa		18.82	■□□□□ 0.6
CLCN7-208	ENST00000564968	FRMPD2	Q68DX3	1309 aa	Predicted RBP	18.82	■□□□□ 0.6
CLCN7-208	ENST00000564968	PTPDC1	A2A3K4	754 aa		18.82	■□□□□ 0.6
CLCN7-208	ENST00000564968	ERC2	O15083	957 aa		18.82	■□□□□ 0.6
CLCN7-208	ENST00000564968	ATP2A2	P16615	1042 aa	Known RBP	18.82	■□□□□ 0.6
CLCN7-208	ENST00000564968	SLC16A2	P36021	539 aa		18.82	■□□□□ 0.6
CLCN7-208	ENST00000564968	BAAT	Q14032	418 aa	Predicted RBP	18.82	■□□□□ 0.6
CLCN7-208	ENST00000564968	PPP4R3B	Q5MIZ7	849 aa		18.82	■□□□□ 0.6
CLCN7-208	ENST00000564968	IQSEC1	Q6DN90	963 aa		18.82	■□□□□ 0.6
CLCN7-208	ENST00000564968	RPUSD2	Q8IZ73	545 aa	Known RBP	18.82	■□□□□ 0.6
CLCN7-208	ENST00000564968	PI4K2B	Q8TCG2	481 aa		18.82	■□□□□ 0.6
CLCN7-208	ENST00000564968	NECAB3	Q96P71	396 aa	Predicted RBP	18.82	■□□□□ 0.6
CLCN7-208	ENST00000564968	CERS4	Q9HA82	394 aa		18.82	■□□□□ 0.6
CLCN7-208	ENST00000564968	IL17RB	Q9NRM6	502 aa		18.82	■□□□□ 0.6
CLCN7-208	ENST00000564968	PTPRS	Q13332	1948 aa		18.82	■□□□□ 0.6
CLCN7-208	ENST00000564968	TNKS	O95271	1327 aa		18.81	■□□□□ 0.6
CLCN7-208	ENST00000564968	TTC41P	Q6P2S7	1318 aa		18.81	■□□□□ 0.6
CLCN7-208	ENST00000564968	NFIB	O00712	420 aa		18.81	■□□□□ 0.6
CLCN7-208	ENST00000564968	ICAM1	P05362	532 aa		18.81	■□□□□ 0.6
CLCN7-208	ENST00000564968	ALDH5A1	P51649	535 aa	Predicted RBP	18.81	■□□□□ 0.6
CLCN7-208	ENST00000564968	TTLL4	Q14679	1199 aa		18.81	■□□□□ 0.6
CLCN7-208	ENST00000564968	RRP12	Q5JTH9	1297 aa	Known RBP	18.81	■□□□□ 0.6
CLCN7-208	ENST00000564968	TTBK2	Q6IQ55	1244 aa		18.81	■□□□□ 0.6
CLCN7-208	ENST00000564968	SLC30A10	Q6XR72	485 aa		18.81	■□□□□ 0.6
CLCN7-208	ENST00000564968	OR6J1	Q8NGC5	347 aa		18.81	■□□□□ 0.6
CLCN7-208	ENST00000564968	WDR11	Q9BZH6	1224 aa		18.81	■□□□□ 0.6
CLCN7-208	ENST00000564968	TSPYL2	Q9H2G4	693 aa	Predicted RBP	18.81	■□□□□ 0.6
CLCN7-208	ENST00000564968	FOXP2	O15409	715 aa		18.8	■□□□□ 0.6
CLCN7-208	ENST00000564968	PLA2G6	O60733	806 aa		18.8	■□□□□ 0.6
CLCN7-208	ENST00000564968	CALML3	P27482	149 aa		18.8	■□□□□ 0.6
CLCN7-208	ENST00000564968	CHMP4BP1	P59074	171 aa		18.8	■□□□□ 0.6
CLCN7-208	ENST00000564968	TFF2	Q03403	129 aa		18.8	■□□□□ 0.6
CLCN7-208	ENST00000564968	DUSP28	Q4G0W2	176 aa		18.8	■□□□□ 0.6
CLCN7-208	ENST00000564968	SYDE2	Q5VT97	1194 aa		18.8	■□□□□ 0.6
CLCN7-208	ENST00000564968	DCAF4	Q8WV16	495 aa		18.8	■□□□□ 0.6
CLCN7-208	ENST00000564968	RANBP17	Q9H2T7	1088 aa	Known RBP	18.8	■□□□□ 0.6
CLCN7-208	ENST00000564968	GPCPD1	Q9NPB8	672 aa		18.8	■□□□□ 0.6
CLCN7-208	ENST00000564968	POLR3E	Q9NVU0	708 aa		18.8	■□□□□ 0.6
CLCN7-208	ENST00000564968	ADD3	Q9UEY8	706 aa	Known RBP	18.8	■□□□□ 0.6
CLCN7-208	ENST00000564968	PCDHA11	Q9Y5I1	949 aa		18.8	■□□□□ 0.6
CLCN7-208	ENST00000564968	TRIP12	Q14669	1992 aa	Predicted RBP	18.79	■□□□□ 0.6
CLCN7-208	ENST00000564968	TET1	Q8NFU7	2136 aa		18.79	■□□□□ 0.6
CLCN7-208	ENST00000564968	RFXAP	O00287	272 aa		18.79	■□□□□ 0.6
CLCN7-208	ENST00000564968	CA3	P07451	260 aa		18.79	■□□□□ 0.6
CLCN7-208	ENST00000564968	CPT1A	P50416	773 aa		18.79	■□□□□ 0.6
CLCN7-208	ENST00000564968	PURA	Q00577	322 aa	Known RBP	18.79	■□□□□ 0.6
CLCN7-208	ENST00000564968	VPS53	Q5VIR6	699 aa		18.79	■□□□□ 0.6
CLCN7-208	ENST00000564968	VWCE	Q96DN2	955 aa		18.79	■□□□□ 0.6
CLCN7-208	ENST00000564968	SEZ6L	Q9BYH1	1024 aa		18.79	■□□□□ 0.6
CLCN7-208	ENST00000564968	GPHN	Q9NQX3	736 aa	Predicted RBP	18.79	■□□□□ 0.6
CLCN7-208	ENST00000564968		Q9Y3F1	56 aa		18.79	■□□□□ 0.6
CLCN7-208	ENST00000564968	MYH6	P13533	1939 aa		18.78	■□□□□ 0.6
CLCN7-208	ENST00000564968	MX1	P20591	662 aa		18.78	■□□□□ 0.6
CLCN7-208	ENST00000564968	PPP2R5B	Q15173	497 aa		18.78	■□□□□ 0.6
CLCN7-208	ENST00000564968	SUPT20HL2	P0C7V6	817 aa		18.77	■□□□□ 0.6
CLCN7-208	ENST00000564968	KCNQ1	P51787	676 aa		18.77	■□□□□ 0.6
CLCN7-208	ENST00000564968	PDE4D	Q08499	809 aa		18.77	■□□□□ 0.6
CLCN7-208	ENST00000564968	TMEM67	Q5HYA8	995 aa		18.77	■□□□□ 0.6
CLCN7-208	ENST00000564968	MORC4	Q8TE76	937 aa		18.77	■□□□□ 0.6
CLCN7-208	ENST00000564968	MTG1	Q9BT17	334 aa	Predicted RBP	18.77	■□□□□ 0.6
CLCN7-208	ENST00000564968	RAD50	Q92878	1312 aa		18.76	■□□□□ 0.59
CLCN7-208	ENST00000564968	GTPBP6	O43824	516 aa	Predicted RBP	18.76	■□□□□ 0.59
CLCN7-208	ENST00000564968	PFKM	P08237	780 aa		18.76	■□□□□ 0.59
CLCN7-208	ENST00000564968	ACTN1	P12814	892 aa		18.76	■□□□□ 0.59
CLCN7-208	ENST00000564968	NBPF20	Q3BBV1	942 aa		18.76	■□□□□ 0.59
CLCN7-208	ENST00000564968	KRT40	Q6A162	431 aa		18.76	■□□□□ 0.59
CLCN7-208	ENST00000564968	COPS5	Q92905	334 aa		18.76	■□□□□ 0.59
CLCN7-208	ENST00000564968	FTO	Q9C0B1	505 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
CLCN7-208	ENST00000564968	NOD1	Q9Y239	953 aa		18.76	■□□□□ 0.59
CLCN7-208	ENST00000564968	EPOP	A6NHQ4	379 aa		18.75	■□□□□ 0.59
CLCN7-208	ENST00000564968	BRDT	Q58F21	947 aa	Predicted RBP	18.75	■□□□□ 0.59
CLCN7-208	ENST00000564968	RNF207	Q6ZRF8	634 aa		18.75	■□□□□ 0.59
CLCN7-208	ENST00000564968	ARNTL2	Q8WYA1	636 aa		18.75	■□□□□ 0.59
CLCN7-208	ENST00000564968	TMEM47	Q9BQJ4	181 aa		18.75	■□□□□ 0.59
CLCN7-208	ENST00000564968	KIAA1217	Q5T5P2	1943 aa		18.74	■□□□□ 0.59
CLCN7-208	ENST00000564968	ORC4	O43929	436 aa		18.74	■□□□□ 0.59
CLCN7-208	ENST00000564968	TOP1	P11387	765 aa	Known RBP	18.74	■□□□□ 0.59
CLCN7-208	ENST00000564968	HAND2	P61296	217 aa		18.74	■□□□□ 0.59
CLCN7-208	ENST00000564968	USH1G	Q495M9	461 aa		18.74	■□□□□ 0.59
CLCN7-208	ENST00000564968	SLC9A7	Q96T83	725 aa		18.74	■□□□□ 0.59
CLCN7-208	ENST00000564968	ANAPC4	Q9UJX5	808 aa		18.74	■□□□□ 0.59
CLCN7-208	ENST00000564968	LAMA4	Q16363	1823 aa		18.74	■□□□□ 0.59
CLCN7-208	ENST00000564968	ARHGEF15	O94989	841 aa		18.73	■□□□□ 0.59
CLCN7-208	ENST00000564968	RPS6	P62753	249 aa	Known RBP	18.73	■□□□□ 0.59
CLCN7-208	ENST00000564968	BTNL9	Q6UXG8	535 aa		18.73	■□□□□ 0.59
CLCN7-208	ENST00000564968	RETREG2	Q8NC44	543 aa		18.73	■□□□□ 0.59
CLCN7-208	ENST00000564968	SCFD2	Q8WU76	684 aa		18.73	■□□□□ 0.59
CLCN7-208	ENST00000564968	CLEC4D	Q8WXI8	215 aa		18.73	■□□□□ 0.59
CLCN7-208	ENST00000564968	MPHOSPH6	Q99547	160 aa	Known RBP	18.73	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms