RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TRIM22Q8IYM9 498 aa18.44■□□□□ 0.54
RAB40C-208ENST00000564703 CUL5Q93034 780 aa18.44■□□□□ 0.54
RAB40C-208ENST00000564703 NCOA5Q9HCD5 579 aaKnown RBP18.44■□□□□ 0.54
RAB40C-208ENST00000564703 GCOM1H8Y6P7 765 aaPredicted RBP18.43■□□□□ 0.54
RAB40C-208ENST00000564703 PRPF3O43395 683 aaKnown RBP18.43■□□□□ 0.54
RAB40C-208ENST00000564703 ST18O60284 1047 aa18.43■□□□□ 0.54
RAB40C-208ENST00000564703 CDKL5O76039 1030 aa18.43■□□□□ 0.54
RAB40C-208ENST00000564703 POLR2MP0CAP2 368 aa18.43■□□□□ 0.54
RAB40C-208ENST00000564703 SSRP1Q08945 709 aaKnown RBP18.43■□□□□ 0.54
RAB40C-208ENST00000564703 TRIM32Q13049 653 aa18.43■□□□□ 0.54
RAB40C-208ENST00000564703 MAMDC4Q6UXC1 1216 aa18.43■□□□□ 0.54
RAB40C-208ENST00000564703 DNERQ8NFT8 737 aa18.43■□□□□ 0.54
RAB40C-208ENST00000564703 TBC1D5Q92609 795 aa18.43■□□□□ 0.54
RAB40C-208ENST00000564703 UNC93B1Q9H1C4 597 aa18.43■□□□□ 0.54
RAB40C-208ENST00000564703 TPCN1Q9ULQ1 816 aa18.43■□□□□ 0.54
RAB40C-208ENST00000564703 ZNF236Q9UL36 1845 aa18.43■□□□□ 0.54
RAB40C-208ENST00000564703 SOWAHBA6NEL2 793 aa18.42■□□□□ 0.54
RAB40C-208ENST00000564703 hCG_1984214I3L0E3 225 aa18.42■□□□□ 0.54
RAB40C-208ENST00000564703 IFNAR1P17181 557 aa18.42■□□□□ 0.54
RAB40C-208ENST00000564703 FUT2Q10981 343 aa18.42■□□□□ 0.54
RAB40C-208ENST00000564703 ZNF713Q8N859 430 aaPredicted RBP18.42■□□□□ 0.54
RAB40C-208ENST00000564703 TBC1D32Q96NH3 1257 aa18.42■□□□□ 0.54
RAB40C-208ENST00000564703 SLC26A6Q9BXS9 759 aa18.42■□□□□ 0.54
RAB40C-208ENST00000564703 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.42■□□□□ 0.54
RAB40C-208ENST00000564703 PSTPIP2Q9H939 334 aa18.42■□□□□ 0.54
RAB40C-208ENST00000564703 NRBP1Q9UHY1 535 aa18.42■□□□□ 0.54
RAB40C-208ENST00000564703 LIMCH1Q9UPQ0 1083 aa18.42■□□□□ 0.54
RAB40C-208ENST00000564703 CNTNAP5Q8WYK1 1306 aa18.42■□□□□ 0.54
RAB40C-208ENST00000564703 SYNGAP1Q96PV0 1343 aa18.42■□□□□ 0.54
RAB40C-208ENST00000564703 PLXNA1Q9UIW2 1896 aa18.41■□□□□ 0.54
RAB40C-208ENST00000564703 LOC102724159A0A0B4J2E5 919 aa18.41■□□□□ 0.54
RAB40C-208ENST00000564703 PFKFB2O60825 505 aa18.41■□□□□ 0.54
RAB40C-208ENST00000564703 CAPN15O75808 1086 aa18.41■□□□□ 0.54
RAB40C-208ENST00000564703 TFRCP02786 760 aaKnown RBP18.41■□□□□ 0.54
RAB40C-208ENST00000564703 GJB1P08034 283 aa18.41■□□□□ 0.54
RAB40C-208ENST00000564703 PWP2Q15269 919 aaKnown RBP18.41■□□□□ 0.54
RAB40C-208ENST00000564703 MAP3K21Q5TCX8 1036 aa18.41■□□□□ 0.54
RAB40C-208ENST00000564703 SLC30A10Q6XR72 485 aa18.41■□□□□ 0.54
RAB40C-208ENST00000564703 SMARCC2Q8TAQ2 1214 aa18.41■□□□□ 0.54
RAB40C-208ENST00000564703 NSUN6Q8TEA1 469 aaKnown RBP18.41■□□□□ 0.54
RAB40C-208ENST00000564703 PHKBQ93100 1093 aa18.41■□□□□ 0.54
RAB40C-208ENST00000564703 ZSCAN31Q96LW9 406 aaPredicted RBP18.41■□□□□ 0.54
RAB40C-208ENST00000564703 KIF2CQ99661 725 aa18.41■□□□□ 0.54
RAB40C-208ENST00000564703 RNF26Q9BY78 433 aaPredicted RBP18.41■□□□□ 0.54
RAB40C-208ENST00000564703 ABHD16BQ9H3Z7 469 aa18.41■□□□□ 0.54
RAB40C-208ENST00000564703 NID2Q14112 1375 aa18.41■□□□□ 0.54
RAB40C-208ENST00000564703 SCG2P13521 617 aa18.4■□□□□ 0.54
RAB40C-208ENST00000564703 CAPN2P17655 700 aa18.4■□□□□ 0.54
RAB40C-208ENST00000564703 ALDH5A1P51649 535 aaPredicted RBP18.4■□□□□ 0.54
RAB40C-208ENST00000564703 HSD17B4P51659 736 aa18.4■□□□□ 0.54
RAB40C-208ENST00000564703 NAPAP54920 295 aa18.4■□□□□ 0.54
RAB40C-208ENST00000564703 PFKFB3Q16875 520 aaPredicted RBP18.4■□□□□ 0.54
RAB40C-208ENST00000564703 PRAMEF19Q5SWL8 479 aa18.4■□□□□ 0.54
RAB40C-208ENST00000564703 ARHGEF16Q5VV41 709 aa18.4■□□□□ 0.54
RAB40C-208ENST00000564703 ARMCX2Q7L311 632 aa18.4■□□□□ 0.54
RAB40C-208ENST00000564703 FCHSD1Q86WN1 690 aa18.4■□□□□ 0.54
RAB40C-208ENST00000564703 SYTL5Q8TDW5 730 aaPredicted RBP18.4■□□□□ 0.54
RAB40C-208ENST00000564703 CCDC12Q8WUD4 166 aaPredicted RBP18.4■□□□□ 0.54
RAB40C-208ENST00000564703 DEFB118Q96PH6 123 aa18.4■□□□□ 0.54
RAB40C-208ENST00000564703 PURBQ96QR8 312 aaKnown RBP18.4■□□□□ 0.54
RAB40C-208ENST00000564703 RMDN3Q96TC7 470 aa18.4■□□□□ 0.54
RAB40C-208ENST00000564703 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.4■□□□□ 0.54
RAB40C-208ENST00000564703 MSCO60682 206 aa18.39■□□□□ 0.53
RAB40C-208ENST00000564703 SNAI1O95863 264 aaPredicted RBP18.39■□□□□ 0.53
RAB40C-208ENST00000564703 CCND3P30281 292 aaPredicted RBP18.39■□□□□ 0.53
RAB40C-208ENST00000564703 HOXA13P31271 388 aaPredicted RBP18.39■□□□□ 0.53
RAB40C-208ENST00000564703 PDE4DQ08499 809 aa18.39■□□□□ 0.53
RAB40C-208ENST00000564703 SCRN1Q12765 414 aa18.39■□□□□ 0.53
RAB40C-208ENST00000564703 NTRK3Q16288 839 aa18.39■□□□□ 0.53
RAB40C-208ENST00000564703 GPKOWQ92917 476 aaPredicted RBP eCLIP18.39■□□□□ 0.53
RAB40C-208ENST00000564703 TAAR1Q96RJ0 339 aa18.39■□□□□ 0.53
RAB40C-208ENST00000564703 GLT8D2Q9H1C3 349 aa18.39■□□□□ 0.53
RAB40C-208ENST00000564703 ZHX1Q9UKY1 873 aaPredicted RBP18.39■□□□□ 0.53
RAB40C-208ENST00000564703 OPLAHO14841 1288 aa18.38■□□□□ 0.53
RAB40C-208ENST00000564703 PPFIA3O75145 1194 aa18.38■□□□□ 0.53
RAB40C-208ENST00000564703 SGPL1O95470 568 aa18.38■□□□□ 0.53
RAB40C-208ENST00000564703 IGHA2P01877 340 aa18.38■□□□□ 0.53
RAB40C-208ENST00000564703 CYBAP13498 195 aa18.38■□□□□ 0.53
RAB40C-208ENST00000564703 SOX10P56693 466 aa18.38■□□□□ 0.53
RAB40C-208ENST00000564703 ACVR2BQ13705 512 aa18.38■□□□□ 0.53
RAB40C-208ENST00000564703 ME3Q16798 604 aa18.38■□□□□ 0.53
RAB40C-208ENST00000564703 WWC2Q6AWC2 1192 aa18.38■□□□□ 0.53
RAB40C-208ENST00000564703 IWS1Q96ST2 819 aa18.38■□□□□ 0.53
RAB40C-208ENST00000564703 PAK6Q9NQU5 681 aaPredicted RBP18.38■□□□□ 0.53
RAB40C-208ENST00000564703 BARHL2Q9NY43 387 aa18.38■□□□□ 0.53
RAB40C-208ENST00000564703 FAM184BQ9ULE4 1060 aa18.38■□□□□ 0.53
RAB40C-208ENST00000564703 SMCO2A6NFE2 343 aa18.37■□□□□ 0.53
RAB40C-208ENST00000564703 SEPT4O43236 478 aa18.37■□□□□ 0.53
RAB40C-208ENST00000564703 DEXIO95424 95 aa18.37■□□□□ 0.53
RAB40C-208ENST00000564703 GJA8P48165 433 aa18.37■□□□□ 0.53
RAB40C-208ENST00000564703 GHRHRQ02643 423 aa18.37■□□□□ 0.53
RAB40C-208ENST00000564703 PPP1R18Q6NYC8 613 aa18.37■□□□□ 0.53
RAB40C-208ENST00000564703 NECAB1Q8N987 351 aa18.37■□□□□ 0.53
RAB40C-208ENST00000564703 U2AF1L4Q8WU68 220 aaKnown RBP18.37■□□□□ 0.53
RAB40C-208ENST00000564703 FGD4Q96M96 766 aa18.37■□□□□ 0.53
RAB40C-208ENST00000564703 SH2B1Q9NRF2 756 aaPredicted RBP18.37■□□□□ 0.53
RAB40C-208ENST00000564703 DDX20Q9UHI6 824 aaKnown RBP18.37■□□□□ 0.53
RAB40C-208ENST00000564703 KIAA0100Q14667 2235 aaKnown RBP18.37■□□□□ 0.53
RAB40C-208ENST00000564703 PIK3CDO00329 1044 aa18.36■□□□□ 0.53
RAB40C-208ENST00000564703 AKR1A1P14550 325 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms