RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 KIF5BP33176 963 aa21.31■■□□□ 1
SYNGR3-204ENST00000564642 LIFRP42702 1097 aa21.31■■□□□ 1
SYNGR3-204ENST00000564642 TRAF1Q13077 416 aa21.31■■□□□ 1
SYNGR3-204ENST00000564642 KRT32Q14532 448 aa21.31■■□□□ 1
SYNGR3-204ENST00000564642 IQSEC1Q6DN90 963 aa21.31■■□□□ 1
SYNGR3-204ENST00000564642 CHRDL2Q6WN34 429 aa21.31■■□□□ 1
SYNGR3-204ENST00000564642 TSEN34Q9BSV6 310 aaKnown RBP21.31■■□□□ 1
SYNGR3-204ENST00000564642 MYL10Q9BUA6 226 aa21.31■■□□□ 1
SYNGR3-204ENST00000564642 VTA1Q9NP79 307 aa21.31■■□□□ 1
SYNGR3-204ENST00000564642 ZMYND8Q9ULU4 1186 aaPredicted RBP21.31■■□□□ 1
SYNGR3-204ENST00000564642 PHF24Q9UPV7 400 aa21.31■■□□□ 1
SYNGR3-204ENST00000564642 COLQQ9Y215 455 aaPredicted RBP21.31■■□□□ 1
SYNGR3-204ENST00000564642 CALM1P0DP23 149 aa21.3■■□□□ 1
SYNGR3-204ENST00000564642 CALM2P0DP24 149 aa21.3■■□□□ 1
SYNGR3-204ENST00000564642 CALM3P0DP25 149 aa21.3■■□□□ 1
SYNGR3-204ENST00000564642 PDE4DQ08499 809 aa21.3■■□□□ 1
SYNGR3-204ENST00000564642 TSGA10IPQ3SY00 556 aa21.3■■□□□ 1
SYNGR3-204ENST00000564642 FBXO16Q8IX29 292 aaPredicted RBP21.3■■□□□ 1
SYNGR3-204ENST00000564642 TBC1D5Q92609 795 aa21.3■■□□□ 1
SYNGR3-204ENST00000564642 PIGSQ96S52 555 aa21.3■■□□□ 1
SYNGR3-204ENST00000564642 LRRC2Q9BYS8 371 aa21.3■■□□□ 1
SYNGR3-204ENST00000564642 PCDHA1Q9Y5I3 950 aa21.3■■□□□ 1
SYNGR3-204ENST00000564642 BAZ2BQ9UIF8 2168 aaKnown RBP21.29■■□□□ 1
SYNGR3-204ENST00000564642 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.29■■□□□ 1
SYNGR3-204ENST00000564642 ADCY6O43306 1168 aa21.29■■□□□ 1
SYNGR3-204ENST00000564642 REC8O95072 547 aa21.29■■□□□ 1
SYNGR3-204ENST00000564642 SYN1P17600 705 aa21.29■■□□□ 1
SYNGR3-204ENST00000564642 GNAQP50148 359 aa21.29■■□□□ 1
SYNGR3-204ENST00000564642 GJA9P57773 515 aa21.29■■□□□ 1
SYNGR3-204ENST00000564642 RTP1P59025 263 aa21.29■■□□□ 1
SYNGR3-204ENST00000564642 KCNA10Q16322 511 aa21.29■■□□□ 1
SYNGR3-204ENST00000564642 TAPT1Q6NXT6 567 aa21.29■■□□□ 1
SYNGR3-204ENST00000564642 RASEFQ8IZ41 740 aa21.29■■□□□ 1
SYNGR3-204ENST00000564642 PCSK9Q8NBP7 692 aaKnown RBP21.29■■□□□ 1
SYNGR3-204ENST00000564642 KLHDC9Q8NEP7 349 aa21.29■■□□□ 1
SYNGR3-204ENST00000564642 PDGFCQ9NRA1 345 aa21.29■■□□□ 1
SYNGR3-204ENST00000564642 ATP11BQ9Y2G3 1177 aa21.29■■□□□ 1
SYNGR3-204ENST00000564642 SLC12A7Q9Y666 1083 aa21.29■■□□□ 1
SYNGR3-204ENST00000564642 LRRC37A2A6NM11 1700 aa21.29■■□□□ 1
SYNGR3-204ENST00000564642 SZT2Q5T011 3432 aa21.28■■□□□ 1
SYNGR3-204ENST00000564642 PNMA6FA0A0J9YX94 578 aa21.28■■□□□ 1
SYNGR3-204ENST00000564642 MOXD2PA6NHM9 499 aa21.28■■□□□ 1
SYNGR3-204ENST00000564642 CYTH3O43739 400 aa21.28■■□□□ 1
SYNGR3-204ENST00000564642 CFBP00751 764 aa21.28■■□□□ 1
SYNGR3-204ENST00000564642 ACLYP53396 1101 aa21.28■■□□□ 1
SYNGR3-204ENST00000564642 COL9A3Q14050 684 aaPredicted RBP21.28■■□□□ 1
SYNGR3-204ENST00000564642 GNASQ5JWF2 1037 aa21.28■■□□□ 1
SYNGR3-204ENST00000564642 SYNE3Q6ZMZ3 975 aa21.28■■□□□ 1
SYNGR3-204ENST00000564642 DHX32Q7L7V1 743 aaKnown RBP21.28■■□□□ 1
SYNGR3-204ENST00000564642 AP5M1Q9H0R1 490 aa21.28■■□□□ 1
SYNGR3-204ENST00000564642 UPF3AQ9H1J1 476 aaKnown RBP21.28■■□□□ 1
SYNGR3-204ENST00000564642 A0A1W2PQ45 241 aaPredicted RBP21.27■■□□□ 1
SYNGR3-204ENST00000564642 A0A1W2PQY0 241 aa21.27■■□□□ 1
SYNGR3-204ENST00000564642 PPP1R11O60927 126 aaPredicted RBP21.27■■□□□ 1
SYNGR3-204ENST00000564642 HMGB1P09429 215 aaKnown RBP21.27■■□□□ 1
SYNGR3-204ENST00000564642 SMPD1P17405 629 aa21.27■■□□□ 1
SYNGR3-204ENST00000564642 CST5P28325 142 aaPredicted RBP21.27■■□□□ 1
SYNGR3-204ENST00000564642 ADCK5Q3MIX3 580 aa21.27■■□□□ 1
SYNGR3-204ENST00000564642 TLK2Q86UE8 772 aa21.27■■□□□ 1
SYNGR3-204ENST00000564642 SYTL5Q8TDW5 730 aaPredicted RBP21.27■■□□□ 1
SYNGR3-204ENST00000564642 NSUN6Q8TEA1 469 aaKnown RBP21.27■■□□□ 1
SYNGR3-204ENST00000564642 PIBF1Q8WXW3 757 aa21.27■■□□□ 1
SYNGR3-204ENST00000564642 TAAR1Q96RJ0 339 aa21.27■■□□□ 1
SYNGR3-204ENST00000564642 LZTS2Q9BRK4 669 aa21.27■■□□□ 1
SYNGR3-204ENST00000564642 GNEQ9Y223 722 aaKnown RBP21.27■■□□□ 1
SYNGR3-204ENST00000564642 CUL9Q8IWT3 2517 aa21.26■□□□□ 0.99
SYNGR3-204ENST00000564642 MYADML2A6NDP7 307 aa21.26■□□□□ 0.99
SYNGR3-204ENST00000564642 DYNC1LI2O43237 492 aaPredicted RBP21.26■□□□□ 0.99
SYNGR3-204ENST00000564642 SMARCA1P28370 1054 aa21.26■□□□□ 0.99
SYNGR3-204ENST00000564642 SLC35G1Q2M3R5 365 aa21.26■□□□□ 0.99
SYNGR3-204ENST00000564642 SAMD3Q8N6K7 520 aa21.26■□□□□ 0.99
SYNGR3-204ENST00000564642 VTI1AQ96AJ9 217 aa21.26■□□□□ 0.99
SYNGR3-204ENST00000564642 RRP36Q96EU6 259 aaKnown RBP21.26■□□□□ 0.99
SYNGR3-204ENST00000564642 SPZ1Q9BXG8 430 aa21.26■□□□□ 0.99
SYNGR3-204ENST00000564642 WDR11Q9BZH6 1224 aa21.26■□□□□ 0.99
SYNGR3-204ENST00000564642 STARD7Q9NQZ5 370 aa21.26■□□□□ 0.99
SYNGR3-204ENST00000564642 MAP3K20Q9NYL2 800 aaKnown RBP21.26■□□□□ 0.99
SYNGR3-204ENST00000564642 PRKAG2Q9UGJ0 569 aa21.26■□□□□ 0.99
SYNGR3-204ENST00000564642 Q9Y3F1 56 aa21.26■□□□□ 0.99
SYNGR3-204ENST00000564642 ASGR1P07306 291 aa21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 RXRAP19793 462 aa21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 EDNRBP24530 442 aa21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 HSPA4P34932 840 aa21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 IRX5P78411 483 aaPredicted RBP21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 EXOSC10Q01780 885 aaKnown RBP21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 SNX17Q15036 470 aa21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 TRIM60Q495X7 471 aa21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 C1orf53Q5VUE5 145 aa21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 ARHGEF16Q5VV41 709 aa21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 CCSAPQ6IQ19 270 aaPredicted RBP21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 SGMS1Q86VZ5 419 aa21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 FANCBQ8NB91 859 aa21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 TCEANC2Q96MN5 208 aa21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 GLT1D1Q96MS3 346 aa21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 RMDN3Q96TC7 470 aa21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 RBM27Q9P2N5 1060 aaKnown RBP21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 SEC63Q9UGP8 760 aaKnown RBP21.25■□□□□ 0.99
SYNGR3-204ENST00000564642 ZEB2O60315 1214 aa21.24■□□□□ 0.99
SYNGR3-204ENST00000564642 HSD17B4P51659 736 aa21.24■□□□□ 0.99
SYNGR3-204ENST00000564642 NKX3-2P78367 333 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms