RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 MNX1P50219 401 aaPredicted RBP20.06■□□□□ 0.8
USB1-209ENST00000564387 APOBRQ0VD83 1088 aa20.06■□□□□ 0.8
USB1-209ENST00000564387 PRAMEF19Q5SWL8 479 aa20.06■□□□□ 0.8
USB1-209ENST00000564387 SLC30A10Q6XR72 485 aa20.06■□□□□ 0.8
USB1-209ENST00000564387 ARMCX2Q7L311 632 aa20.06■□□□□ 0.8
USB1-209ENST00000564387 MCF2L2Q86YR7 1114 aa20.06■□□□□ 0.8
USB1-209ENST00000564387 CCDC144CPQ8IYA2 1237 aa20.06■□□□□ 0.8
USB1-209ENST00000564387 ANKLE1Q8NAG6 615 aa20.06■□□□□ 0.8
USB1-209ENST00000564387 TBC1D5Q92609 795 aa20.06■□□□□ 0.8
USB1-209ENST00000564387 PURBQ96QR8 312 aaKnown RBP20.06■□□□□ 0.8
USB1-209ENST00000564387 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.06■□□□□ 0.8
USB1-209ENST00000564387 DDX20Q9UHI6 824 aaKnown RBP20.06■□□□□ 0.8
USB1-209ENST00000564387 PTPDC1A2A3K4 754 aa20.05■□□□□ 0.8
USB1-209ENST00000564387 HSD17B4P51659 736 aa20.05■□□□□ 0.8
USB1-209ENST00000564387 RTN1Q16799 776 aa20.05■□□□□ 0.8
USB1-209ENST00000564387 HOMER1Q86YM7 354 aa20.05■□□□□ 0.8
USB1-209ENST00000564387 RAB11FIP4Q86YS3 637 aa20.05■□□□□ 0.8
USB1-209ENST00000564387 DNERQ8NFT8 737 aa20.05■□□□□ 0.8
USB1-209ENST00000564387 RRP36Q96EU6 259 aaKnown RBP20.05■□□□□ 0.8
USB1-209ENST00000564387 ABHD16BQ9H3Z7 469 aa20.05■□□□□ 0.8
USB1-209ENST00000564387 ADD3Q9UEY8 706 aaKnown RBP20.05■□□□□ 0.8
USB1-209ENST00000564387 FRMPD3Q5JV73 1810 aa20.04■□□□□ 0.8
USB1-209ENST00000564387 EDNRBP24530 442 aa20.04■□□□□ 0.8
USB1-209ENST00000564387 CDC27P30260 824 aa20.04■□□□□ 0.8
USB1-209ENST00000564387 FGD1P98174 961 aa20.04■□□□□ 0.8
USB1-209ENST00000564387 CMTR1Q8N1G2 835 aaKnown RBP20.04■□□□□ 0.8
USB1-209ENST00000564387 SYTL5Q8TDW5 730 aaPredicted RBP20.04■□□□□ 0.8
USB1-209ENST00000564387 UPF3BQ9BZI7 483 aaKnown RBP20.04■□□□□ 0.8
USB1-209ENST00000564387 CNPY2Q9Y2B0 182 aa20.04■□□□□ 0.8
USB1-209ENST00000564387 CNTNAP5Q8WYK1 1306 aa20.03■□□□□ 0.8
USB1-209ENST00000564387 MCM3APO60318 1980 aa20.03■□□□□ 0.8
USB1-209ENST00000564387 GOLGA8AA7E2F4 631 aa20.03■□□□□ 0.8
USB1-209ENST00000564387 GOLGA8BA8MQT2 603 aa20.03■□□□□ 0.8
USB1-209ENST00000564387 TFRCP02786 760 aaKnown RBP20.03■□□□□ 0.8
USB1-209ENST00000564387 CALML3P27482 149 aa20.03■□□□□ 0.8
USB1-209ENST00000564387 PDIA3P30101 505 aaKnown RBP20.03■□□□□ 0.8
USB1-209ENST00000564387 ALDH5A1P51649 535 aaPredicted RBP20.03■□□□□ 0.8
USB1-209ENST00000564387 ACVR2BQ13705 512 aa20.03■□□□□ 0.8
USB1-209ENST00000564387 COL20A1Q9P218 1284 aa20.03■□□□□ 0.8
USB1-209ENST00000564387 GTF3C3Q9Y5Q9 886 aa20.03■□□□□ 0.8
USB1-209ENST00000564387 CCDC196A0A1B0GTZ2 297 aa20.02■□□□□ 0.8
USB1-209ENST00000564387 MLLT1Q03111 559 aaPredicted RBP20.02■□□□□ 0.8
USB1-209ENST00000564387 ZNF274Q96GC6 653 aaPredicted RBP20.02■□□□□ 0.8
USB1-209ENST00000564387 LRRC37A2A6NM11 1700 aa20.02■□□□□ 0.79
USB1-209ENST00000564387 AKR1A1P14550 325 aa20.01■□□□□ 0.79
USB1-209ENST00000564387 CNGA1P29973 690 aa20.01■□□□□ 0.79
USB1-209ENST00000564387 ADD1P35611 737 aaKnown RBP20.01■□□□□ 0.79
USB1-209ENST00000564387 METAP2P50579 478 aaKnown RBP eCLIP20.01■□□□□ 0.79
USB1-209ENST00000564387 NTRK3Q16288 839 aa20.01■□□□□ 0.79
USB1-209ENST00000564387 PDRG1Q9NUG6 133 aa20.01■□□□□ 0.79
USB1-209ENST00000564387 SEC63Q9UGP8 760 aaKnown RBP20.01■□□□□ 0.79
USB1-209ENST00000564387 TAPT1Q6NXT6 567 aa20■□□□□ 0.79
USB1-209ENST00000564387 CCDC82Q8N4S0 544 aa20■□□□□ 0.79
USB1-209ENST00000564387 TAAR1Q96RJ0 339 aa20■□□□□ 0.79
USB1-209ENST00000564387 VTA1Q9NP79 307 aa20■□□□□ 0.79
USB1-209ENST00000564387 FAM184BQ9ULE4 1060 aa20■□□□□ 0.79
USB1-209ENST00000564387 PIK3CDO00329 1044 aa19.99■□□□□ 0.79
USB1-209ENST00000564387 FARP2O94887 1054 aaPredicted RBP19.99■□□□□ 0.79
USB1-209ENST00000564387 CFBP00751 764 aa19.99■□□□□ 0.79
USB1-209ENST00000564387 COL6A1P12109 1028 aa19.99■□□□□ 0.79
USB1-209ENST00000564387 NKX3-2P78367 333 aa19.99■□□□□ 0.79
USB1-209ENST00000564387 CCDC144BQ3MJ40 725 aa19.99■□□□□ 0.79
USB1-209ENST00000564387 TEX2Q8IWB9 1127 aa19.99■□□□□ 0.79
USB1-209ENST00000564387 NSUN6Q8TEA1 469 aaKnown RBP19.99■□□□□ 0.79
USB1-209ENST00000564387 PIBF1Q8WXW3 757 aa19.99■□□□□ 0.79
USB1-209ENST00000564387 IWS1Q96ST2 819 aa19.99■□□□□ 0.79
USB1-209ENST00000564387 DDX49Q9Y6V7 483 aaKnown RBP19.99■□□□□ 0.79
USB1-209ENST00000564387 RBM47A0AV96 593 aaKnown RBP19.98■□□□□ 0.79
USB1-209ENST00000564387 ADCY6O43306 1168 aa19.98■□□□□ 0.79
USB1-209ENST00000564387 DUSP11O75319 330 aaKnown RBP19.98■□□□□ 0.79
USB1-209ENST00000564387 RBM25P49756 843 aaKnown RBP19.98■□□□□ 0.79
USB1-209ENST00000564387 RMDN3Q96TC7 470 aa19.98■□□□□ 0.79
USB1-209ENST00000564387 KIF2CQ99661 725 aa19.98■□□□□ 0.79
USB1-209ENST00000564387 ZHX1Q9UKY1 873 aaPredicted RBP19.98■□□□□ 0.79
USB1-209ENST00000564387 V9GY48 417 aaPredicted RBP19.98■□□□□ 0.79
USB1-209ENST00000564387 hCG_1642624A0A1W2PR95 340 aa19.97■□□□□ 0.79
USB1-209ENST00000564387 B4DLN1 442 aa19.97■□□□□ 0.79
USB1-209ENST00000564387 GCOM1H8Y6P7 765 aaPredicted RBP19.97■□□□□ 0.79
USB1-209ENST00000564387 hCG_1984214I3L0E3 225 aa19.97■□□□□ 0.79
USB1-209ENST00000564387 MEIS2O14770 477 aa19.97■□□□□ 0.79
USB1-209ENST00000564387 POLR2MP0CAP2 368 aa19.97■□□□□ 0.79
USB1-209ENST00000564387 RARBP10826 455 aa19.97■□□□□ 0.79
USB1-209ENST00000564387 IFNAR1P17181 557 aa19.97■□□□□ 0.79
USB1-209ENST00000564387 MRPL12P52815 198 aaKnown RBP19.97■□□□□ 0.79
USB1-209ENST00000564387 ZNF713Q8N859 430 aaPredicted RBP19.97■□□□□ 0.79
USB1-209ENST00000564387 MPHOSPH6Q99547 160 aaKnown RBP19.97■□□□□ 0.79
USB1-209ENST00000564387 FRMPD4Q14CM0 1322 aa19.97■□□□□ 0.79
USB1-209ENST00000564387 DNM1LO00429 736 aa19.96■□□□□ 0.79
USB1-209ENST00000564387 PRPF3O43395 683 aaKnown RBP19.96■□□□□ 0.79
USB1-209ENST00000564387 ADAMTS4O75173 837 aa19.96■□□□□ 0.79
USB1-209ENST00000564387 ANKRD1Q15327 319 aa19.96■□□□□ 0.79
USB1-209ENST00000564387 WWC2Q6AWC2 1192 aa19.96■□□□□ 0.79
USB1-209ENST00000564387 IQSEC1Q6DN90 963 aa19.96■□□□□ 0.79
USB1-209ENST00000564387 ARRDC4Q8NCT1 418 aa19.96■□□□□ 0.79
USB1-209ENST00000564387 DIS3LQ8TF46 1054 aaKnown RBP19.96■□□□□ 0.79
USB1-209ENST00000564387 PAWRQ96IZ0 340 aaKnown RBP19.96■□□□□ 0.79
USB1-209ENST00000564387 UPF3AQ9H1J1 476 aaKnown RBP19.96■□□□□ 0.79
USB1-209ENST00000564387 PXMP2Q9NR77 195 aa19.96■□□□□ 0.79
USB1-209ENST00000564387 RBM27Q9P2N5 1060 aaKnown RBP19.96■□□□□ 0.79
USB1-209ENST00000564387 NAP1L2Q9ULW6 460 aaPredicted RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms