RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 TRIM8Q9BZR9 551 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 GPRC5CQ9NQ84 441 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 B4GALT6Q9UBX8 382 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 SPEF1Q9Y4P9 236 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 STXBP3O00186 592 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 MEIS1O00470 390 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 NEMP1O14524 444 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 WNT9AO14904 365 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 MSCO60682 206 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 LSSP48449 732 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 NEK2P51955 445 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 DSG1Q02413 1049 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 KCNAB2Q13303 367 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 ZAR1Q86SH2 424 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 CAMKK2Q96RR4 588 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 KRTAP17-1Q9BYP8 105 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 CRTAC1Q9NQ79 661 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 ADAMTS8Q9UP79 889 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 PCDHA8Q9Y5H6 950 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 E2F8A0AVK6 867 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 DHX15O43143 795 aaKnown RBP3.49□□□□□ -1.85
CHD9-209ENST00000564255 PLS3P13797 630 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 LTBRP36941 435 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 ID4P47928 161 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 OVCH1Q7RTY7 1134 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 MFSD4AQ8N468 514 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 DIO2Q92813 273 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 WNK4Q96J92 1243 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 PCGF6Q9BYE7 350 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 KCNF1Q9H3M0 494 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 MKNK2Q9HBH9 465 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 FGF10O15520 208 aaPredicted RBP3.49□□□□□ -1.85
CHD9-209ENST00000564255 LCP1P13796 627 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 IFNGR1P15260 489 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 SCNN1BP51168 640 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 OXCT1P55809 520 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 TBX4P57082 545 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 GUCY1A3Q02108 690 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 GAB4Q2WGN9 574 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 CREB3L3Q68CJ9 461 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 MTDHQ86UE4 582 aaKnown RBP3.49□□□□□ -1.85
CHD9-209ENST00000564255 TSPYL5Q86VY4 417 aaPredicted RBP3.49□□□□□ -1.85
CHD9-209ENST00000564255 KSR1Q8IVT5 923 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 SHISA5Q8N114 240 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 LINC00116Q8NCU8 138 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 PCDH19Q8TAB3 1148 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 CELF4Q9BZC1 486 aaKnown RBP3.49□□□□□ -1.85
CHD9-209ENST00000564255 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.49□□□□□ -1.85
CHD9-209ENST00000564255 CLEC1BQ9P126 229 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 ZNF891A8MT65 544 aaPredicted RBP3.49□□□□□ -1.85
CHD9-209ENST00000564255 M0R2C6 588 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 PRKD3O94806 890 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 ADCYAP1R1P41586 468 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 CLEC16AQ2KHT3 1053 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 SYDE2Q5VT97 1194 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 CNTD1Q8N815 330 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 IGSF22Q8N9C0 903 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 RCBTB1Q8NDN9 531 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 SMC1BQ8NDV3 1235 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 TSR2Q969E8 191 aaKnown RBP3.49□□□□□ -1.85
CHD9-209ENST00000564255 SCARF2Q96GP6 870 aaPredicted RBP3.49□□□□□ -1.85
CHD9-209ENST00000564255 TRIT1Q9H3H1 467 aaKnown RBP3.49□□□□□ -1.85
CHD9-209ENST00000564255 C7orf69Q9H7B7 122 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 RAXQ9Y2V3 346 aa3.49□□□□□ -1.85
CHD9-209ENST00000564255 PRC1O43663 620 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 MAP4K4O95819 1239 aaPredicted RBP3.48□□□□□ -1.85
CHD9-209ENST00000564255 YBX3P16989 372 aaKnown RBP eCLIP3.48□□□□□ -1.85
CHD9-209ENST00000564255 PPP2R5AQ15172 486 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 INF2Q27J81 1249 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 SKOR2Q2VWA4 1001 aaPredicted RBP3.48□□□□□ -1.85
CHD9-209ENST00000564255 CYP27C1Q4G0S4 372 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 TMEM177Q53S58 311 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 RNF111Q6ZNA4 994 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 OTOP1Q7RTM1 612 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 THAP5Q7Z6K1 395 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 NXPE1Q8N323 547 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 TBC1D32Q96NH3 1257 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 MENTQ9BUN1 341 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 CCDC8Q9H0W5 538 aaPredicted RBP3.48□□□□□ -1.85
CHD9-209ENST00000564255 U3KQE9 123 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 TRBV23OR9-2A0A075B6M9 112 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 SHTN1A0MZ66 631 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 GNAT3A8MTJ3 354 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 WDR64B1ANS9 1081 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 GABRDO14764 452 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 PAMP19021 973 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 ENDOUP21128 410 aaKnown RBP3.48□□□□□ -1.85
CHD9-209ENST00000564255 TMPRSS15P98073 1019 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 FAPQ12884 760 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 PAK1Q13153 545 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 KIZQ2M2Z5 673 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 INAVAQ3KP66 663 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 EEF1DP3Q658K8 133 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 C16orf59Q7L2K0 433 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 CHMP4CQ96CF2 233 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 PTCHD1Q96NR3 888 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 CDIP1Q9H305 208 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 TRHDEQ9UKU6 1024 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 ZNF281Q9Y2X9 895 aa3.48□□□□□ -1.85
CHD9-209ENST00000564255 KIF3BO15066 747 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms