RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 PTPREP23469 700 aa19.48■□□□□ 0.71
CMTM3-208ENST00000564247 RGS2P41220 211 aa19.48■□□□□ 0.71
CMTM3-208ENST00000564247 NAPAP54920 295 aa19.48■□□□□ 0.71
CMTM3-208ENST00000564247 NLRP5P59047 1200 aa19.48■□□□□ 0.71
CMTM3-208ENST00000564247 TRMT44Q8IYL2 757 aaKnown RBP19.48■□□□□ 0.71
CMTM3-208ENST00000564247 SHCBP1Q8NEM2 672 aa19.48■□□□□ 0.71
CMTM3-208ENST00000564247 FBXO18Q8NFZ0 1043 aa19.48■□□□□ 0.71
CMTM3-208ENST00000564247 GPKOWQ92917 476 aaPredicted RBP eCLIP19.48■□□□□ 0.71
CMTM3-208ENST00000564247 UNC93B1Q9H1C4 597 aa19.48■□□□□ 0.71
CMTM3-208ENST00000564247 SLC38A10Q9HBR0 1119 aa19.48■□□□□ 0.71
CMTM3-208ENST00000564247 VPS54Q9P1Q0 977 aa19.48■□□□□ 0.71
CMTM3-208ENST00000564247 PCDHA1Q9Y5I3 950 aa19.48■□□□□ 0.71
CMTM3-208ENST00000564247 SLC15A5A6NIM6 579 aa19.47■□□□□ 0.71
CMTM3-208ENST00000564247 CALML3P27482 149 aa19.47■□□□□ 0.71
CMTM3-208ENST00000564247 DDIT3P35638 169 aa19.47■□□□□ 0.71
CMTM3-208ENST00000564247 GJA8P48165 433 aa19.47■□□□□ 0.71
CMTM3-208ENST00000564247 GUCY1B3Q02153 619 aa19.47■□□□□ 0.71
CMTM3-208ENST00000564247 MAP2K5Q13163 448 aa19.47■□□□□ 0.71
CMTM3-208ENST00000564247 WDR78Q5VTH9 848 aa19.47■□□□□ 0.71
CMTM3-208ENST00000564247 KRT40Q6A162 431 aa19.47■□□□□ 0.71
CMTM3-208ENST00000564247 WWC2Q6AWC2 1192 aa19.47■□□□□ 0.71
CMTM3-208ENST00000564247 TRIB2Q92519 343 aa19.47■□□□□ 0.71
CMTM3-208ENST00000564247 BRMS1Q9HCU9 246 aa19.47■□□□□ 0.71
CMTM3-208ENST00000564247 IVNS1ABPQ9Y6Y0 642 aa19.47■□□□□ 0.71
CMTM3-208ENST00000564247 ZNF236Q9UL36 1845 aa19.46■□□□□ 0.71
CMTM3-208ENST00000564247 ICAM1P05362 532 aa19.46■□□□□ 0.71
CMTM3-208ENST00000564247 GNA11P29992 359 aa19.46■□□□□ 0.71
CMTM3-208ENST00000564247 OAZ1P54368 228 aa19.46■□□□□ 0.71
CMTM3-208ENST00000564247 GRB14Q14449 540 aa19.46■□□□□ 0.71
CMTM3-208ENST00000564247 GALNT17Q6IS24 598 aa19.46■□□□□ 0.71
CMTM3-208ENST00000564247 PPP1R18Q6NYC8 613 aa19.46■□□□□ 0.71
CMTM3-208ENST00000564247 CPXCR1Q8N123 301 aa19.46■□□□□ 0.71
CMTM3-208ENST00000564247 SHISA4Q96DD7 197 aa19.46■□□□□ 0.71
CMTM3-208ENST00000564247 APBA2Q99767 749 aa19.46■□□□□ 0.71
CMTM3-208ENST00000564247 GLT8D2Q9H1C3 349 aa19.46■□□□□ 0.71
CMTM3-208ENST00000564247 C6orf50Q9HD87 102 aa19.46■□□□□ 0.71
CMTM3-208ENST00000564247 PAK6Q9NQU5 681 aaPredicted RBP19.46■□□□□ 0.71
CMTM3-208ENST00000564247 STXBP3O00186 592 aa19.45■□□□□ 0.7
CMTM3-208ENST00000564247 STRNO43815 780 aa19.45■□□□□ 0.7
CMTM3-208ENST00000564247 HOXC6P09630 235 aa19.45■□□□□ 0.7
CMTM3-208ENST00000564247 ZSCAN22P10073 491 aaPredicted RBP19.45■□□□□ 0.7
CMTM3-208ENST00000564247 CAPN2P17655 700 aa19.45■□□□□ 0.7
CMTM3-208ENST00000564247 ERCC3P19447 782 aa19.45■□□□□ 0.7
CMTM3-208ENST00000564247 GNL2Q13823 731 aaKnown RBP19.45■□□□□ 0.7
CMTM3-208ENST00000564247 PLS1Q14651 629 aa19.45■□□□□ 0.7
CMTM3-208ENST00000564247 TMEM132BQ14DG7 1078 aa19.45■□□□□ 0.7
CMTM3-208ENST00000564247 USH1GQ495M9 461 aa19.45■□□□□ 0.7
CMTM3-208ENST00000564247 MCTP1Q6DN14 999 aa19.45■□□□□ 0.7
CMTM3-208ENST00000564247 MROH8Q9H579 483 aa19.45■□□□□ 0.7
CMTM3-208ENST00000564247 RAVER2Q9HCJ3 691 aaKnown RBP19.45■□□□□ 0.7
CMTM3-208ENST00000564247 CCPG1Q9ULG6 757 aa19.45■□□□□ 0.7
CMTM3-208ENST00000564247 KCNJ14Q9UNX9 436 aa19.45■□□□□ 0.7
CMTM3-208ENST00000564247 MTMR6Q9Y217 621 aa19.45■□□□□ 0.7
CMTM3-208ENST00000564247 MRPL11Q9Y3B7 192 aaKnown RBP19.45■□□□□ 0.7
CMTM3-208ENST00000564247 SMCO2A6NFE2 343 aa19.44■□□□□ 0.7
CMTM3-208ENST00000564247 PPP1R11O60927 126 aaPredicted RBP19.44■□□□□ 0.7
CMTM3-208ENST00000564247 SLC25A27O95847 323 aa19.44■□□□□ 0.7
CMTM3-208ENST00000564247 MRPL12P52815 198 aaKnown RBP19.44■□□□□ 0.7
CMTM3-208ENST00000564247 MAP3K21Q5TCX8 1036 aa19.44■□□□□ 0.7
CMTM3-208ENST00000564247 REPS2Q8NFH8 660 aa19.44■□□□□ 0.7
CMTM3-208ENST00000564247 BICD2Q8TD16 824 aa19.44■□□□□ 0.7
CMTM3-208ENST00000564247 U2AF1L4Q8WU68 220 aaKnown RBP19.44■□□□□ 0.7
CMTM3-208ENST00000564247 PHF20Q9BVI0 1012 aa19.44■□□□□ 0.7
CMTM3-208ENST00000564247 GJB4Q9NTQ9 266 aa19.44■□□□□ 0.7
CMTM3-208ENST00000564247 ZNFX1Q9P2E3 1918 aaKnown RBP19.44■□□□□ 0.7
CMTM3-208ENST00000564247 ABCB11O95342 1321 aa19.44■□□□□ 0.7
CMTM3-208ENST00000564247 RPTORQ8N122 1335 aa19.44■□□□□ 0.7
CMTM3-208ENST00000564247 ATP2A1O14983 1001 aa19.43■□□□□ 0.7
CMTM3-208ENST00000564247 SGPL1O95470 568 aa19.43■□□□□ 0.7
CMTM3-208ENST00000564247 MMP1P03956 469 aa19.43■□□□□ 0.7
CMTM3-208ENST00000564247 KRT2P35908 639 aa19.43■□□□□ 0.7
CMTM3-208ENST00000564247 STAT3P40763 770 aa19.43■□□□□ 0.7
CMTM3-208ENST00000564247 TRIM32Q13049 653 aa19.43■□□□□ 0.7
CMTM3-208ENST00000564247 TKFCQ3LXA3 575 aa19.43■□□□□ 0.7
CMTM3-208ENST00000564247 NCAPG2Q86XI2 1143 aa19.43■□□□□ 0.7
CMTM3-208ENST00000564247 RIOX2Q8IUF8 465 aa19.43■□□□□ 0.7
CMTM3-208ENST00000564247 ABRAQ8N0Z2 381 aa19.43■□□□□ 0.7
CMTM3-208ENST00000564247 AGBL1Q96MI9 1066 aa19.43■□□□□ 0.7
CMTM3-208ENST00000564247 DEFB118Q96PH6 123 aa19.43■□□□□ 0.7
CMTM3-208ENST00000564247 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.43■□□□□ 0.7
CMTM3-208ENST00000564247 HMX1Q9NP08 348 aaPredicted RBP19.43■□□□□ 0.7
CMTM3-208ENST00000564247 ZNF214Q9UL59 606 aaPredicted RBP19.43■□□□□ 0.7
CMTM3-208ENST00000564247 ESYT2A0FGR8 921 aa19.42■□□□□ 0.7
CMTM3-208ENST00000564247 BRD1O95696 1058 aa19.42■□□□□ 0.7
CMTM3-208ENST00000564247 ALAS1P13196 640 aa19.42■□□□□ 0.7
CMTM3-208ENST00000564247 ADCY7P51828 1080 aa19.42■□□□□ 0.7
CMTM3-208ENST00000564247 CCL14Q16627 93 aa19.42■□□□□ 0.7
CMTM3-208ENST00000564247 FOXD4L5Q5VV16 416 aaPredicted RBP19.42■□□□□ 0.7
CMTM3-208ENST00000564247 FOXD4L4Q8WXT5 416 aaPredicted RBP19.42■□□□□ 0.7
CMTM3-208ENST00000564247 CUL5Q93034 780 aa19.42■□□□□ 0.7
CMTM3-208ENST00000564247 TEX13BQ9BXU2 312 aa19.42■□□□□ 0.7
CMTM3-208ENST00000564247 ZMYND12Q9H0C1 365 aa19.42■□□□□ 0.7
CMTM3-208ENST00000564247 ZSCAN16Q9H4T2 348 aaPredicted RBP19.42■□□□□ 0.7
CMTM3-208ENST00000564247 PSTPIP2Q9H939 334 aa19.42■□□□□ 0.7
CMTM3-208ENST00000564247 PCDHA4Q9UN74 947 aa19.42■□□□□ 0.7
CMTM3-208ENST00000564247 ZNF536O15090 1300 aa19.42■□□□□ 0.7
CMTM3-208ENST00000564247 PRKAR2AP13861 404 aaKnown RBP19.41■□□□□ 0.7
CMTM3-208ENST00000564247 ADORA2AP29274 412 aa19.41■□□□□ 0.7
CMTM3-208ENST00000564247 COPB2P35606 906 aa19.41■□□□□ 0.7
CMTM3-208ENST00000564247 SNRNP48Q6IEG0 339 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms