RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 TTLL1O95922 423 aa11.2□□□□□ -0.62
UBFD1-203ENST00000564106 HOXC6P09630 235 aa11.2□□□□□ -0.62
UBFD1-203ENST00000564106 CYBAP13498 195 aa11.2□□□□□ -0.62
UBFD1-203ENST00000564106 TAL1P17542 331 aaPredicted RBP11.2□□□□□ -0.62
UBFD1-203ENST00000564106 SMARCA1P28370 1054 aa11.2□□□□□ -0.62
UBFD1-203ENST00000564106 UBE2HP62256 183 aa11.2□□□□□ -0.62
UBFD1-203ENST00000564106 DNM1Q05193 864 aaKnown RBP11.2□□□□□ -0.62
UBFD1-203ENST00000564106 COG2Q14746 738 aa11.2□□□□□ -0.62
UBFD1-203ENST00000564106 GRM4Q14833 912 aa11.2□□□□□ -0.62
UBFD1-203ENST00000564106 LRRC26Q2I0M4 334 aa11.2□□□□□ -0.62
UBFD1-203ENST00000564106 GTF3C2Q8WUA4 911 aaPredicted RBP11.2□□□□□ -0.62
UBFD1-203ENST00000564106 TMEM47Q9BQJ4 181 aa11.2□□□□□ -0.62
UBFD1-203ENST00000564106 BRMS1Q9HCU9 246 aa11.2□□□□□ -0.62
UBFD1-203ENST00000564106 MTMR4Q9NYA4 1195 aa11.2□□□□□ -0.62
UBFD1-203ENST00000564106 SYNPO2Q9UMS6 1093 aa11.2□□□□□ -0.62
UBFD1-203ENST00000564106 ADAMTS5Q9UNA0 930 aa11.2□□□□□ -0.62
UBFD1-203ENST00000564106 LTBP2Q14767 1821 aa11.2□□□□□ -0.62
UBFD1-203ENST00000564106 MCM3APO60318 1980 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 LCTP09848 1927 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 CNTNAP5Q8WYK1 1306 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 GOLGA6L4A6NEF3 574 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 FIBPO43427 364 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 NDUFB10O96000 172 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 PGK2P07205 417 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 ASPRV1Q53RT3 343 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 KRT40Q6A162 431 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 NECAB2Q7Z6G3 386 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 LENG1Q96BZ8 264 aaPredicted RBP11.19□□□□□ -0.62
UBFD1-203ENST00000564106 CEP95Q96GE4 821 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 LRCH3Q96II8 777 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 SPATA32Q96LK8 384 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 HTATIP2Q9BUP3 242 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 C11orf49Q9H6J7 331 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 KANSL2Q9H9L4 492 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 ZNF214Q9UL59 606 aaPredicted RBP11.19□□□□□ -0.62
UBFD1-203ENST00000564106 ISY1Q9ULR0 285 aaKnown RBP11.19□□□□□ -0.62
UBFD1-203ENST00000564106 CNPY2Q9Y2B0 182 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 RIPK3Q9Y572 518 aa11.19□□□□□ -0.62
UBFD1-203ENST00000564106 hCG_1984214I3L0E3 225 aa11.18□□□□□ -0.62
UBFD1-203ENST00000564106 WDR46O15213 610 aaKnown RBP11.18□□□□□ -0.62
UBFD1-203ENST00000564106 EVI5O60447 810 aa11.18□□□□□ -0.62
UBFD1-203ENST00000564106 MMP1P03956 469 aa11.18□□□□□ -0.62
UBFD1-203ENST00000564106 PARP1P09874 1014 aaKnown RBP11.18□□□□□ -0.62
UBFD1-203ENST00000564106 PLS1Q14651 629 aa11.18□□□□□ -0.62
UBFD1-203ENST00000564106 GSE1Q14687 1217 aa11.18□□□□□ -0.62
UBFD1-203ENST00000564106 GPATCH4Q5T3I0 446 aaKnown RBP11.18□□□□□ -0.62
UBFD1-203ENST00000564106 LRRC47Q8N1G4 583 aaKnown RBP11.18□□□□□ -0.62
UBFD1-203ENST00000564106 ZNF713Q8N859 430 aaPredicted RBP11.18□□□□□ -0.62
UBFD1-203ENST00000564106 ANKLE1Q8NAG6 615 aa11.18□□□□□ -0.62
UBFD1-203ENST00000564106 CCDC148Q8NFR7 591 aa11.18□□□□□ -0.62
UBFD1-203ENST00000564106 LPAR1Q92633 364 aa11.18□□□□□ -0.62
UBFD1-203ENST00000564106 SPZ1Q9BXG8 430 aa11.18□□□□□ -0.62
UBFD1-203ENST00000564106 FOXP1Q9H334 677 aaPredicted RBP11.18□□□□□ -0.62
UBFD1-203ENST00000564106 ARHGEF10LQ9HCE6 1279 aa11.18□□□□□ -0.62
UBFD1-203ENST00000564106 SH3GLB2Q9NR46 395 aa11.18□□□□□ -0.62
UBFD1-203ENST00000564106 PPP1R9AQ9ULJ8 1098 aa11.18□□□□□ -0.62
UBFD1-203ENST00000564106 VWA5AO00534 786 aa11.17□□□□□ -0.62
UBFD1-203ENST00000564106 RAD21O60216 631 aa11.17□□□□□ -0.62
UBFD1-203ENST00000564106 U2AF2P26368 475 aaKnown RBP eCLIP11.17□□□□□ -0.62
UBFD1-203ENST00000564106 CALML3P27482 149 aa11.17□□□□□ -0.62
UBFD1-203ENST00000564106 CCNA1P78396 465 aa11.17□□□□□ -0.62
UBFD1-203ENST00000564106 IRX5P78411 483 aaPredicted RBP11.17□□□□□ -0.62
UBFD1-203ENST00000564106 GUCY1B3Q02153 619 aa11.17□□□□□ -0.62
UBFD1-203ENST00000564106 FUT2Q10981 343 aa11.17□□□□□ -0.62
UBFD1-203ENST00000564106 FOXD4L6Q3SYB3 417 aaPredicted RBP11.17□□□□□ -0.62
UBFD1-203ENST00000564106 FOXD4L3Q6VB84 417 aaPredicted RBP11.17□□□□□ -0.62
UBFD1-203ENST00000564106 NCAPG2Q86XI2 1143 aa11.17□□□□□ -0.62
UBFD1-203ENST00000564106 CCAR1Q8IX12 1150 aaKnown RBP11.17□□□□□ -0.62
UBFD1-203ENST00000564106 SHCBP1Q8NEM2 672 aa11.17□□□□□ -0.62
UBFD1-203ENST00000564106 CCDC12Q8WUD4 166 aaPredicted RBP11.17□□□□□ -0.62
UBFD1-203ENST00000564106 FGD4Q96M96 766 aa11.17□□□□□ -0.62
UBFD1-203ENST00000564106 GDF15Q99988 308 aa11.17□□□□□ -0.62
UBFD1-203ENST00000564106 POLR3EQ9NVU0 708 aa11.17□□□□□ -0.62
UBFD1-203ENST00000564106 HOXC10Q9NYD6 342 aa11.17□□□□□ -0.62
UBFD1-203ENST00000564106 NYAP2Q9P242 653 aa11.17□□□□□ -0.62
UBFD1-203ENST00000564106 DDX20Q9UHI6 824 aaKnown RBP11.17□□□□□ -0.62
UBFD1-203ENST00000564106 LRRC37A2A6NM11 1700 aa11.17□□□□□ -0.62
UBFD1-203ENST00000564106 LAMA2P24043 3122 aaKnown RBP11.17□□□□□ -0.62
UBFD1-203ENST00000564106 PALM3A6NDB9 673 aaPredicted RBP11.16□□□□□ -0.62
UBFD1-203ENST00000564106 KLRF2D3W0D1 207 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 DTNBO60941 627 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 PPFIA3O75145 1194 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 PLEKHA8P1O95397 391 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 YEATS4O95619 227 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 SCG2P13521 617 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 PTGS1P23219 599 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 MAGEA10P43363 369 aaPredicted RBP11.16□□□□□ -0.62
UBFD1-203ENST00000564106 FOSBP53539 338 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 PFKFB3Q16875 520 aaPredicted RBP11.16□□□□□ -0.62
UBFD1-203ENST00000564106 RILPL1Q5EBL4 403 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 GJC2Q5T442 439 aaPredicted RBP11.16□□□□□ -0.62
UBFD1-203ENST00000564106 MYSM1Q5VVJ2 828 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 GALNT17Q6IS24 598 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 NOSTRINQ8IVI9 506 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 CCDC82Q8N4S0 544 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 SRBD1Q8N5C6 995 aaKnown RBP11.16□□□□□ -0.62
UBFD1-203ENST00000564106 KCNG4Q8TDN1 519 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 MKL1Q969V6 931 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 MAML3Q96JK9 1138 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 CLIP2Q9UDT6 1046 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms