RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 TNFRSF25Q93038 417 aa14.79□□□□□ -0.04
SPG7-209ENST00000564047 MAF1Q9H063 256 aa14.79□□□□□ -0.04
SPG7-209ENST00000564047 RBPJLQ9UBG7 517 aa14.79□□□□□ -0.04
SPG7-209ENST00000564047 ATP6V1DQ9Y5K8 247 aa14.79□□□□□ -0.04
SPG7-209ENST00000564047 BAZ2BQ9UIF8 2168 aaKnown RBP14.78□□□□□ -0.04
SPG7-209ENST00000564047 RBBP6Q7Z6E9 1792 aaKnown RBP14.78□□□□□ -0.04
SPG7-209ENST00000564047 A0A0G2JMZ2 1700 aa14.78□□□□□ -0.04
SPG7-209ENST00000564047 PIK3CDO00329 1044 aa14.78□□□□□ -0.04
SPG7-209ENST00000564047 OPLAHO14841 1288 aa14.78□□□□□ -0.04
SPG7-209ENST00000564047 TAL1P17542 331 aaPredicted RBP14.78□□□□□ -0.04
SPG7-209ENST00000564047 COPB2P35606 906 aa14.78□□□□□ -0.04
SPG7-209ENST00000564047 GHRHRQ02643 423 aa14.78□□□□□ -0.04
SPG7-209ENST00000564047 NR5A1Q13285 461 aa14.78□□□□□ -0.04
SPG7-209ENST00000564047 PLS1Q14651 629 aa14.78□□□□□ -0.04
SPG7-209ENST00000564047 MCTP2Q6DN12 878 aa14.78□□□□□ -0.04
SPG7-209ENST00000564047 MCF2L2Q86YR7 1114 aa14.78□□□□□ -0.04
SPG7-209ENST00000564047 NOSTRINQ8IVI9 506 aa14.78□□□□□ -0.04
SPG7-209ENST00000564047 REXO1Q8N1G1 1221 aaKnown RBP14.78□□□□□ -0.04
SPG7-209ENST00000564047 CLEC4DQ8WXI8 215 aa14.78□□□□□ -0.04
SPG7-209ENST00000564047 PAGR1Q9BTK6 254 aa14.78□□□□□ -0.04
SPG7-209ENST00000564047 SPATC1LQ9H0A9 340 aa14.78□□□□□ -0.04
SPG7-209ENST00000564047 MAP3K20Q9NYL2 800 aaKnown RBP14.78□□□□□ -0.04
SPG7-209ENST00000564047 PCDHA6Q9UN73 950 aa14.78□□□□□ -0.04
SPG7-209ENST00000564047 PCDHA8Q9Y5H6 950 aa14.78□□□□□ -0.04
SPG7-209ENST00000564047 MYH6P13533 1939 aa14.78□□□□□ -0.04
SPG7-209ENST00000564047 TRIOBPQ9H2D6 2365 aa14.77□□□□□ -0.04
SPG7-209ENST00000564047 GCOM1H8Y6P7 765 aaPredicted RBP14.77□□□□□ -0.05
SPG7-209ENST00000564047 MEIS2O14770 477 aa14.77□□□□□ -0.05
SPG7-209ENST00000564047 ADAMTS3O15072 1205 aa14.77□□□□□ -0.05
SPG7-209ENST00000564047 SLC25A27O95847 323 aa14.77□□□□□ -0.05
SPG7-209ENST00000564047 POLR2MP0CAP2 368 aa14.77□□□□□ -0.05
SPG7-209ENST00000564047 CLK2P49760 499 aaKnown RBP14.77□□□□□ -0.05
SPG7-209ENST00000564047 KRT25Q7Z3Z0 450 aa14.77□□□□□ -0.05
SPG7-209ENST00000564047 CHST13Q8NET6 341 aa14.77□□□□□ -0.05
SPG7-209ENST00000564047 TNPO1Q92973 898 aaKnown RBP14.77□□□□□ -0.05
SPG7-209ENST00000564047 TRERF1Q96PN7 1200 aa14.77□□□□□ -0.05
SPG7-209ENST00000564047 CFHR5Q9BXR6 569 aa14.77□□□□□ -0.05
SPG7-209ENST00000564047 TXNRD2Q9NNW7 524 aa14.77□□□□□ -0.05
SPG7-209ENST00000564047 RNF146Q9NTX7 359 aa14.77□□□□□ -0.05
SPG7-209ENST00000564047 MORF4L1Q9UBU8 362 aa14.77□□□□□ -0.05
SPG7-209ENST00000564047 RIPK3Q9Y572 518 aa14.77□□□□□ -0.05
SPG7-209ENST00000564047 POTEFA5A3E0 1075 aa14.76□□□□□ -0.05
SPG7-209ENST00000564047 ALDH1A1P00352 501 aa14.76□□□□□ -0.05
SPG7-209ENST00000564047 ERVK-9P63128 1117 aa14.76□□□□□ -0.05
SPG7-209ENST00000564047 ERVK-24P63145 666 aa14.76□□□□□ -0.05
SPG7-209ENST00000564047 AP3B2Q13367 1082 aa14.76□□□□□ -0.05
SPG7-209ENST00000564047 TAF1CQ15572 869 aaPredicted RBP14.76□□□□□ -0.05
SPG7-209ENST00000564047 MUM1L1Q5H9M0 696 aa14.76□□□□□ -0.05
SPG7-209ENST00000564047 SHCBP1Q8NEM2 672 aa14.76□□□□□ -0.05
SPG7-209ENST00000564047 GPRC5AQ8NFJ5 357 aa14.76□□□□□ -0.05
SPG7-209ENST00000564047 MOV10L1Q9BXT6 1211 aaKnown RBP14.76□□□□□ -0.05
SPG7-209ENST00000564047 ACAD9Q9H845 621 aa14.76□□□□□ -0.05
SPG7-209ENST00000564047 HOMER2Q9NSB8 354 aa14.76□□□□□ -0.05
SPG7-209ENST00000564047 BIN2Q9UBW5 565 aaPredicted RBP14.76□□□□□ -0.05
SPG7-209ENST00000564047 FBXO40Q9UH90 709 aa14.76□□□□□ -0.05
SPG7-209ENST00000564047 TRIM17Q9Y577 477 aa14.76□□□□□ -0.05
SPG7-209ENST00000564047 ADGRA2Q96PE1 1338 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 CCDC194A0A1B0GVG4 234 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 NFIBO00712 420 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 PEX10O60683 326 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 CFBP00751 764 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 FOSP01100 380 aaPredicted RBP14.75□□□□□ -0.05
SPG7-209ENST00000564047 HSD17B4P51659 736 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 CCNA1P78396 465 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 GSE1Q14687 1217 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 UBE2SQ16763 222 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 Q3C1V9 767 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 MYSM1Q5VVJ2 828 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 JAKMIP3Q5VZ66 844 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 ATL3Q6DD88 541 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 USP17L6PQ6QN14 398 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.75□□□□□ -0.05
SPG7-209ENST00000564047 RASGRP4Q8TDF6 673 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 ZFYVE28Q9HCC9 887 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 TMEM260Q9NX78 707 aa14.75□□□□□ -0.05
SPG7-209ENST00000564047 RANBP2P49792 3224 aaKnown RBP14.74□□□□□ -0.05
SPG7-209ENST00000564047 NONOQ15233 471 aaKnown RBP eCLIP14.74□□□□□ -0.05
SPG7-209ENST00000564047 FAM110CQ1W6H9 321 aa14.74□□□□□ -0.05
SPG7-209ENST00000564047 RILPL1Q5EBL4 403 aa14.74□□□□□ -0.05
SPG7-209ENST00000564047 EARS2Q5JPH6 523 aaKnown RBP14.74□□□□□ -0.05
SPG7-209ENST00000564047 FAM173BQ6P4H8 233 aa14.74□□□□□ -0.05
SPG7-209ENST00000564047 CLEC17AQ6ZS10 378 aa14.74□□□□□ -0.05
SPG7-209ENST00000564047 PIK3AP1Q6ZUJ8 805 aa14.74□□□□□ -0.05
SPG7-209ENST00000564047 ANKRD13CQ8N6S4 541 aa14.74□□□□□ -0.05
SPG7-209ENST00000564047 TBC1D5Q92609 795 aa14.74□□□□□ -0.05
SPG7-209ENST00000564047 ZNF396Q96N95 335 aaPredicted RBP14.74□□□□□ -0.05
SPG7-209ENST00000564047 MROH8Q9H579 483 aa14.74□□□□□ -0.05
SPG7-209ENST00000564047 NOL7Q9UMY1 257 aaKnown RBP14.74□□□□□ -0.05
SPG7-209ENST00000564047 SPDYE3A6NKU9 549 aa14.73□□□□□ -0.05
SPG7-209ENST00000564047 TLR2O60603 784 aa14.73□□□□□ -0.05
SPG7-209ENST00000564047 BCRP11274 1271 aa14.73□□□□□ -0.05
SPG7-209ENST00000564047 ERCC3P19447 782 aa14.73□□□□□ -0.05
SPG7-209ENST00000564047 HOXA13P31271 388 aaPredicted RBP14.73□□□□□ -0.05
SPG7-209ENST00000564047 TRAPPC10P48553 1259 aa14.73□□□□□ -0.05
SPG7-209ENST00000564047 C17orf99Q6UX52 265 aa14.73□□□□□ -0.05
SPG7-209ENST00000564047 RNF207Q6ZRF8 634 aa14.73□□□□□ -0.05
SPG7-209ENST00000564047 NCAPG2Q86XI2 1143 aa14.73□□□□□ -0.05
SPG7-209ENST00000564047 COL6A3P12111 3177 aa14.73□□□□□ -0.05
SPG7-209ENST00000564047 COL11A1P12107 1806 aaPredicted RBP14.72□□□□□ -0.05
SPG7-209ENST00000564047 FAM205CA6NFA0 338 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms