RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 TMX2Q9Y320 296 aa11.09□□□□□ -0.63
UBFD1-202ENST00000563366 FRMPD2Q68DX3 1309 aaPredicted RBP11.09□□□□□ -0.63
UBFD1-202ENST00000563366 CCDC194A0A1B0GVG4 234 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 TRIM75PA6NK02 468 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 ZBTB5O15062 677 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 CTAGE5O15320 804 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 GRIN3BO60391 1043 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 CTNND1O60716 968 aaKnown RBP11.08□□□□□ -0.64
UBFD1-202ENST00000563366 CUTAO60888 179 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 BMP3P12645 472 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 FAM160A1Q05DH4 1040 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 NR5A1Q13285 461 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 ORC2Q13416 577 aaPredicted RBP11.08□□□□□ -0.64
UBFD1-202ENST00000563366 WWC2Q6AWC2 1192 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 KRT25Q7Z3Z0 450 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 CLEC10AQ8IUN9 316 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 MRPS27Q92552 414 aaKnown RBP11.08□□□□□ -0.64
UBFD1-202ENST00000563366 TEPSINQ96N21 525 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 PIGSQ96S52 555 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 ZNF341Q9BYN7 854 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 NUP62CLQ9H1M0 184 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 CLIC4Q9Y696 253 aa11.08□□□□□ -0.64
UBFD1-202ENST00000563366 SHTN1A0MZ66 631 aa11.07□□□□□ -0.64
UBFD1-202ENST00000563366 KINO60870 393 aaKnown RBP11.07□□□□□ -0.64
UBFD1-202ENST00000563366 NDUFB10O96000 172 aa11.07□□□□□ -0.64
UBFD1-202ENST00000563366 STAT2P52630 851 aa11.07□□□□□ -0.64
UBFD1-202ENST00000563366 IKQ13123 557 aaPredicted RBP11.07□□□□□ -0.64
UBFD1-202ENST00000563366 NPY5RQ15761 445 aa11.07□□□□□ -0.64
UBFD1-202ENST00000563366 SUPT20HL1Q3ZLR7 823 aa11.07□□□□□ -0.64
UBFD1-202ENST00000563366 ANGEL2Q5VTE6 544 aaKnown RBP11.07□□□□□ -0.64
UBFD1-202ENST00000563366 BLOC1S3Q6QNY0 202 aa11.07□□□□□ -0.64
UBFD1-202ENST00000563366 LRSAM1Q6UWE0 723 aa11.07□□□□□ -0.64
UBFD1-202ENST00000563366 ADGRF4Q8IZF3 695 aa11.07□□□□□ -0.64
UBFD1-202ENST00000563366 PIBF1Q8WXW3 757 aa11.07□□□□□ -0.64
UBFD1-202ENST00000563366 LPAR1Q92633 364 aa11.07□□□□□ -0.64
UBFD1-202ENST00000563366 GPKOWQ92917 476 aaPredicted RBP eCLIP11.07□□□□□ -0.646e-6■□□□□ 11.1
UBFD1-202ENST00000563366 TNFRSF25Q93038 417 aa11.07□□□□□ -0.64
UBFD1-202ENST00000563366 MTMR8Q96EF0 704 aa11.07□□□□□ -0.64
UBFD1-202ENST00000563366 PGBD1Q96JS3 809 aa11.07□□□□□ -0.64
UBFD1-202ENST00000563366 FTOQ9C0B1 505 aaKnown RBP eCLIP11.07□□□□□ -0.64
UBFD1-202ENST00000563366 GGA3Q9NZ52 723 aa11.07□□□□□ -0.64
UBFD1-202ENST00000563366 PCDHA7Q9UN72 937 aa11.07□□□□□ -0.64
UBFD1-202ENST00000563366 SMCO2A6NFE2 343 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 LAD1O00515 517 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 PLA2G6O60733 806 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 EGFRP00533 1210 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 YBX3P16989 372 aaKnown RBP eCLIP11.06□□□□□ -0.64
UBFD1-202ENST00000563366 CMA1P23946 247 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 MRE11P49959 708 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 ADCY7P51828 1080 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 PTPAQ15257 358 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 TTC38Q5R3I4 469 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 C9orf131Q5VYM1 1079 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 BTNL9Q6UXG8 535 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 RNF19BQ6ZMZ0 732 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 NYAP1Q6ZVC0 841 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 KCTD1Q719H9 257 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 MIGA2Q7L4E1 593 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 FAM160B2Q86V87 743 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 SIAH1Q8IUQ4 282 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 CCAR1Q8IX12 1150 aaKnown RBP11.06□□□□□ -0.64
UBFD1-202ENST00000563366 SCUBE3Q8IX30 993 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 REXO1Q8N1G1 1221 aaKnown RBP11.06□□□□□ -0.64
UBFD1-202ENST00000563366 CHURC1Q8WUH1 139 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 FERMT2Q96AC1 680 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 CCDC34Q96HJ3 373 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 FEZ1Q99689 392 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 UBA5Q9GZZ9 404 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 TNMDQ9H2S6 317 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 VCPKMTQ9H867 229 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 JMJD4Q9H9V9 463 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 AS3MTQ9HBK9 375 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 VAT1LQ9HCJ6 419 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 DACT1Q9NYF0 836 aa11.06□□□□□ -0.64
UBFD1-202ENST00000563366 RBBP6Q7Z6E9 1792 aaKnown RBP11.05□□□□□ -0.64
UBFD1-202ENST00000563366 SYCE3A1L190 88 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 FSD2A1L4K1 749 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 PHF20L1A8MW92 1017 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 TOB1P50616 345 aaPredicted RBP11.05□□□□□ -0.64
UBFD1-202ENST00000563366 MRPL12P52815 198 aaKnown RBP11.05□□□□□ -0.64
UBFD1-202ENST00000563366 USP14P54578 494 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 NONOQ15233 471 aaKnown RBP eCLIP11.05□□□□□ -0.64
UBFD1-202ENST00000563366 GPR162Q16538 588 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 MAP3K11Q16584 847 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 SLC35G1Q2M3R5 365 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 SYDE2Q5VT97 1194 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 PIK3AP1Q6ZUJ8 805 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 USP50Q70EL3 339 aaPredicted RBP11.05□□□□□ -0.64
UBFD1-202ENST00000563366 ILDR2Q71H61 639 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 FSIP1Q8NA03 581 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 CUL5Q93034 780 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 DCPSQ96C86 337 aaKnown RBP11.05□□□□□ -0.64
UBFD1-202ENST00000563366 SHISA4Q96DD7 197 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 NAP1L4Q99733 375 aaKnown RBP11.05□□□□□ -0.64
UBFD1-202ENST00000563366 PYM1Q9BRP8 204 aaKnown RBP11.05□□□□□ -0.64
UBFD1-202ENST00000563366 AMNQ9BXJ7 453 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 CLSTN2Q9H4D0 955 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 FAM13BQ9NYF5 915 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 PNMA2Q9UL42 364 aa11.05□□□□□ -0.64
UBFD1-202ENST00000563366 IQCA1LA6NCM1 817 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 669.1 ms