RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 PLS1Q14651 629 aa12.03□□□□□ -0.48
SNX29-202ENST00000563308 ANKRD45Q5TZF3 282 aa12.03□□□□□ -0.48
SNX29-202ENST00000563308 NCAPG2Q86XI2 1143 aa12.03□□□□□ -0.48
SNX29-202ENST00000563308 RIOX2Q8IUF8 465 aa12.03□□□□□ -0.48
SNX29-202ENST00000563308 FAM126BQ8IXS8 530 aa12.03□□□□□ -0.48
SNX29-202ENST00000563308 NEK9Q8TD19 979 aa12.03□□□□□ -0.48
SNX29-202ENST00000563308 MKL1Q969V6 931 aa12.03□□□□□ -0.48
SNX29-202ENST00000563308 ZBED2Q9BTP6 218 aa12.03□□□□□ -0.48
SNX29-202ENST00000563308 GOPCQ9HD26 462 aa12.03□□□□□ -0.48
SNX29-202ENST00000563308 CNPY2Q9Y2B0 182 aa12.03□□□□□ -0.48
SNX29-202ENST00000563308 TECTAO75443 2155 aa12.02□□□□□ -0.48
SNX29-202ENST00000563308 SLC25A27O95847 323 aa12.02□□□□□ -0.49
SNX29-202ENST00000563308 STAT3P40763 770 aa12.02□□□□□ -0.49
SNX29-202ENST00000563308 PDE1AP54750 535 aa12.02□□□□□ -0.49
SNX29-202ENST00000563308 LRRFIP1Q32MZ4 808 aaKnown RBP12.02□□□□□ -0.49
SNX29-202ENST00000563308 CEP95Q96GE4 821 aa12.02□□□□□ -0.49
SNX29-202ENST00000563308 MAML3Q96JK9 1138 aa12.02□□□□□ -0.49
SNX29-202ENST00000563308 MTMR4Q9NYA4 1195 aa12.02□□□□□ -0.49
SNX29-202ENST00000563308 CLIP2Q9UDT6 1046 aa12.02□□□□□ -0.49
SNX29-202ENST00000563308 SMCHD1A6NHR9 2005 aa12.02□□□□□ -0.49
SNX29-202ENST00000563308 PLIN4Q96Q06 1357 aa12.02□□□□□ -0.49
SNX29-202ENST00000563308 KMT2EQ8IZD2 1858 aa12.02□□□□□ -0.49
SNX29-202ENST00000563308 COL4A4P53420 1690 aaPredicted RBP12.01□□□□□ -0.49
SNX29-202ENST00000563308 GALR2O43603 387 aaPredicted RBP12.01□□□□□ -0.49
SNX29-202ENST00000563308 ADAMTS4O75173 837 aa12.01□□□□□ -0.49
SNX29-202ENST00000563308 C6orf222P0C671 652 aaPredicted RBP12.01□□□□□ -0.49
SNX29-202ENST00000563308 FCER1AP12319 257 aa12.01□□□□□ -0.49
SNX29-202ENST00000563308 VCPP55072 806 aaKnown RBP12.01□□□□□ -0.49
SNX29-202ENST00000563308 PPARAQ07869 468 aa12.01□□□□□ -0.49
SNX29-202ENST00000563308 PTPROQ16827 1216 aa12.01□□□□□ -0.49
SNX29-202ENST00000563308 VPS53Q5VIR6 699 aa12.01□□□□□ -0.49
SNX29-202ENST00000563308 HERC6Q8IVU3 1022 aa12.01□□□□□ -0.49
SNX29-202ENST00000563308 NEDD1Q8NHV4 660 aa12.01□□□□□ -0.49
SNX29-202ENST00000563308 KCNG4Q8TDN1 519 aa12.01□□□□□ -0.49
SNX29-202ENST00000563308 SLF1Q9BQI6 1058 aa12.01□□□□□ -0.49
SNX29-202ENST00000563308 INCENPQ9NQS7 918 aa12.01□□□□□ -0.49
SNX29-202ENST00000563308 MTUS1Q9ULD2 1270 aa12.01□□□□□ -0.49
SNX29-202ENST00000563308 FAM184BQ9ULE4 1060 aa12.01□□□□□ -0.49
SNX29-202ENST00000563308 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.01□□□□□ -0.49
SNX29-202ENST00000563308 SYNRGQ9UMZ2 1314 aa12.01□□□□□ -0.49
SNX29-202ENST00000563308 ACACBO00763 2458 aa12.01□□□□□ -0.49
SNX29-202ENST00000563308 RAD21O60216 631 aa12□□□□□ -0.49
SNX29-202ENST00000563308 PGK2P07205 417 aa12□□□□□ -0.49
SNX29-202ENST00000563308 ASGR1P07306 291 aa12□□□□□ -0.49
SNX29-202ENST00000563308 KCNJ6P48051 423 aa12□□□□□ -0.49
SNX29-202ENST00000563308 ZXDAP98168 799 aa12□□□□□ -0.49
SNX29-202ENST00000563308 SIGLEC14Q08ET2 396 aa12□□□□□ -0.49
SNX29-202ENST00000563308 TTLL4Q14679 1199 aa12□□□□□ -0.49
SNX29-202ENST00000563308 ZNF792Q3KQV3 632 aa12□□□□□ -0.49
SNX29-202ENST00000563308 DEFB128Q7Z7B8 93 aa12□□□□□ -0.49
SNX29-202ENST00000563308 ZNF444Q8N0Y2 327 aaPredicted RBP12□□□□□ -0.49
SNX29-202ENST00000563308 GMCL1P1Q8NEA9 526 aa12□□□□□ -0.49
SNX29-202ENST00000563308 EVI5LQ96CN4 794 aa12□□□□□ -0.49
SNX29-202ENST00000563308 YTHDC1Q96MU7 727 aaKnown RBP12□□□□□ -0.49
SNX29-202ENST00000563308 NACAP1Q9BZK3 213 aa12□□□□□ -0.49
SNX29-202ENST00000563308 NAPBQ9H115 298 aa12□□□□□ -0.49
SNX29-202ENST00000563308 ZNF287Q9HBT7 754 aa12□□□□□ -0.49
SNX29-202ENST00000563308 SH2B1Q9NRF2 756 aaPredicted RBP12□□□□□ -0.49
SNX29-202ENST00000563308 SYNPO2Q9UMS6 1093 aa12□□□□□ -0.49
SNX29-202ENST00000563308 RIPK3Q9Y572 518 aa12□□□□□ -0.49
SNX29-202ENST00000563308 COL11A1P12107 1806 aaPredicted RBP12□□□□□ -0.49
SNX29-202ENST00000563308 STXBP3O00186 592 aa11.99□□□□□ -0.49
SNX29-202ENST00000563308 ATP2A1O14983 1001 aa11.99□□□□□ -0.49
SNX29-202ENST00000563308 TTLL1O95922 423 aa11.99□□□□□ -0.49
SNX29-202ENST00000563308 TAL1P17542 331 aaPredicted RBP11.99□□□□□ -0.49
SNX29-202ENST00000563308 TFAP4Q01664 338 aa11.99□□□□□ -0.49
SNX29-202ENST00000563308 PDE4BQ07343 736 aa11.99□□□□□ -0.49
SNX29-202ENST00000563308 TIGD5Q53EQ6 642 aa11.99□□□□□ -0.49
SNX29-202ENST00000563308 FRMD5Q7Z6J6 570 aa11.99□□□□□ -0.49
SNX29-202ENST00000563308 SMC5Q8IY18 1101 aa11.99□□□□□ -0.49
SNX29-202ENST00000563308 LRRC47Q8N1G4 583 aaKnown RBP11.99□□□□□ -0.49
SNX29-202ENST00000563308 PRPF38AQ8NAV1 312 aaKnown RBP11.99□□□□□ -0.49
SNX29-202ENST00000563308 KLHDC9Q8NEP7 349 aa11.99□□□□□ -0.49
SNX29-202ENST00000563308 PABPC5Q96DU9 382 aaKnown RBP11.99□□□□□ -0.49
SNX29-202ENST00000563308 TGS1Q96RS0 853 aaKnown RBP11.99□□□□□ -0.49
SNX29-202ENST00000563308 MMP19Q99542 508 aa11.99□□□□□ -0.49
SNX29-202ENST00000563308 TEX13BQ9BXU2 312 aa11.99□□□□□ -0.49
SNX29-202ENST00000563308 IL17RBQ9NRM6 502 aa11.99□□□□□ -0.49
SNX29-202ENST00000563308 DIS3Q9Y2L1 958 aaKnown RBP11.99□□□□□ -0.49
SNX29-202ENST00000563308 NCOR2Q9Y618 2525 aa11.99□□□□□ -0.49
SNX29-202ENST00000563308 UMODL1Q5DID0 1318 aa11.98□□□□□ -0.49
SNX29-202ENST00000563308 DNAJC25-GNG10A0A024R161 153 aa11.98□□□□□ -0.49
SNX29-202ENST00000563308 A0A0D9SFI3 127 aa11.98□□□□□ -0.49
SNX29-202ENST00000563308 CD4P01730 458 aa11.98□□□□□ -0.49
SNX29-202ENST00000563308 IGHDP01880 384 aa11.98□□□□□ -0.49
SNX29-202ENST00000563308 FGRP09769 529 aa11.98□□□□□ -0.49
SNX29-202ENST00000563308 COPB2P35606 906 aa11.98□□□□□ -0.49
SNX29-202ENST00000563308 NOVP48745 357 aa11.98□□□□□ -0.49
SNX29-202ENST00000563308 CTDSPL2Q05D32 466 aa11.98□□□□□ -0.49
SNX29-202ENST00000563308 ALX1Q15699 326 aa11.98□□□□□ -0.49
SNX29-202ENST00000563308 GNASQ5JWF2 1037 aa11.98□□□□□ -0.49
SNX29-202ENST00000563308 SNRNP48Q6IEG0 339 aaKnown RBP11.98□□□□□ -0.49
SNX29-202ENST00000563308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.98□□□□□ -0.49
SNX29-202ENST00000563308 LENG1Q96BZ8 264 aaPredicted RBP11.98□□□□□ -0.49
SNX29-202ENST00000563308 SCLYQ96I15 445 aa11.98□□□□□ -0.49
SNX29-202ENST00000563308 FAM227BQ96M60 508 aa11.98□□□□□ -0.49
SNX29-202ENST00000563308 HINFPQ9BQA5 517 aa11.98□□□□□ -0.49
SNX29-202ENST00000563308 TINF2Q9BSI4 451 aa11.98□□□□□ -0.49
SNX29-202ENST00000563308 FTOQ9C0B1 505 aaKnown RBP eCLIP11.98□□□□□ -0.49
SNX29-202ENST00000563308 SUGCTQ9HAC7 445 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms