RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 LRRC15Q8TF66 581 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 MRFAP1L1Q96HT8 127 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 CCSER1Q9C0I3 900 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 MEIS2O14770 477 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 TXKP42681 527 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 CUL4BQ13620 913 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 TNFAIP1Q13829 316 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 FBXO11Q86XK2 927 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 KCNF1Q9H3M0 494 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 HACL1Q9UJ83 578 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 GOLGA6L6A8MZA4 724 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 ATP1A3P13637 1013 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 PTGS1P23219 599 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 RRAGBQ5VZM2 374 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 PPP4R3AQ6IN85 833 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 IGSF22Q8N9C0 903 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 RASSF8Q8NHQ8 419 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 AK8Q96MA6 479 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 GSDMAQ96QA5 445 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 MED15Q96RN5 788 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 P2RX7Q99572 595 aaKnown RBP10.63□□□□□ -0.71
LINC00838-201ENST00000562956 VCPKMTQ9H867 229 aa10.63□□□□□ -0.71
LINC00838-201ENST00000562956 TPM4P67936 248 aa10.62□□□□□ -0.71
LINC00838-201ENST00000562956 KIF4BQ2VIQ3 1234 aa10.62□□□□□ -0.71
LINC00838-201ENST00000562956 CCDC144BQ3MJ40 725 aa10.62□□□□□ -0.71
LINC00838-201ENST00000562956 CCDC186Q7Z3E2 898 aa10.62□□□□□ -0.71
LINC00838-201ENST00000562956 CABP7Q86V35 215 aa10.62□□□□□ -0.71
LINC00838-201ENST00000562956 GLT8D2Q9H1C3 349 aa10.62□□□□□ -0.71
LINC00838-201ENST00000562956 FANCLQ9NW38 375 aa10.62□□□□□ -0.71
LINC00838-201ENST00000562956 OPLAHO14841 1288 aa10.62□□□□□ -0.71
LINC00838-201ENST00000562956 GTPBP6O43824 516 aaPredicted RBP10.62□□□□□ -0.71
LINC00838-201ENST00000562956 ASNSP08243 561 aa10.62□□□□□ -0.71
LINC00838-201ENST00000562956 CD44P16070 742 aaKnown RBP10.62□□□□□ -0.71
LINC00838-201ENST00000562956 TRMT44Q8IYL2 757 aaKnown RBP10.62□□□□□ -0.71
LINC00838-201ENST00000562956 SMYD4Q8IYR2 804 aaPredicted RBP10.62□□□□□ -0.71
LINC00838-201ENST00000562956 GJA10Q969M2 543 aa10.62□□□□□ -0.71
LINC00838-201ENST00000562956 MMTAG2Q9BU76 263 aaKnown RBP10.62□□□□□ -0.71
LINC00838-201ENST00000562956 XPO4Q9C0E2 1151 aaKnown RBP10.62□□□□□ -0.71
LINC00838-201ENST00000562956 DEFB129Q9H1M3 183 aa10.62□□□□□ -0.71
LINC00838-201ENST00000562956 IFNKQ9P0W0 207 aa10.62□□□□□ -0.71
LINC00838-201ENST00000562956 DDX25Q9UHL0 483 aaKnown RBP10.62□□□□□ -0.71
LINC00838-201ENST00000562956 ARFGEF1Q9Y6D6 1849 aa10.62□□□□□ -0.71
LINC00838-201ENST00000562956 SRCAPQ6ZRS2 3230 aa10.62□□□□□ -0.71
LINC00838-201ENST00000562956 PLCG1P19174 1290 aa10.61□□□□□ -0.71
LINC00838-201ENST00000562956 KIFC2Q96AC6 838 aa10.61□□□□□ -0.71
LINC00838-201ENST00000562956 ANO3Q9BYT9 981 aa10.61□□□□□ -0.71
LINC00838-201ENST00000562956 DACH1Q9UI36 760 aa10.61□□□□□ -0.71
LINC00838-201ENST00000562956 ZNF500O60304 480 aaPredicted RBP10.61□□□□□ -0.71
LINC00838-201ENST00000562956 FXR2P51116 673 aaKnown RBP eCLIP10.61□□□□□ -0.71
LINC00838-201ENST00000562956 FANCCQ00597 558 aa10.61□□□□□ -0.71
LINC00838-201ENST00000562956 HAS1Q92839 578 aa10.61□□□□□ -0.71
LINC00838-201ENST00000562956 ZNF341Q9BYN7 854 aa10.61□□□□□ -0.71
LINC00838-201ENST00000562956 HSP90AA4PQ58FG1 418 aa10.61□□□□□ -0.71
LINC00838-201ENST00000562956 DNTTIP2Q5QJE6 756 aaKnown RBP10.61□□□□□ -0.71
LINC00838-201ENST00000562956 NBPF12Q5TAG4 269 aaPredicted RBP10.61□□□□□ -0.71
LINC00838-201ENST00000562956 ARHGAP27Q6ZUM4 889 aa10.61□□□□□ -0.71
LINC00838-201ENST00000562956 SH2D4AQ9H788 454 aa10.61□□□□□ -0.71
LINC00838-201ENST00000562956 FBXO28Q9NVF7 368 aa10.61□□□□□ -0.71
LINC00838-201ENST00000562956 KBTBD4Q9NVX7 518 aa10.61□□□□□ -0.71
LINC00838-201ENST00000562956 POTEMA6NI47 508 aa10.6□□□□□ -0.71
LINC00838-201ENST00000562956 PPP1R3GB7ZBB8 358 aa10.6□□□□□ -0.71
LINC00838-201ENST00000562956 RPN1P04843 607 aaKnown RBP10.6□□□□□ -0.71
LINC00838-201ENST00000562956 TPM3P06753 285 aa10.6□□□□□ -0.71
LINC00838-201ENST00000562956 HOXA13P31271 388 aaPredicted RBP10.6□□□□□ -0.71
LINC00838-201ENST00000562956 KLHL10Q6JEL2 608 aa10.6□□□□□ -0.71
LINC00838-201ENST00000562956 CCDC174Q6PII3 467 aa10.6□□□□□ -0.71
LINC00838-201ENST00000562956 SAMD1Q6SPF0 538 aaPredicted RBP10.6□□□□□ -0.71
LINC00838-201ENST00000562956 ENOX1Q8TC92 643 aaKnown RBP10.6□□□□□ -0.71
LINC00838-201ENST00000562956 TRPM4Q8TD43 1214 aa10.6□□□□□ -0.71
LINC00838-201ENST00000562956 CRYGNQ8WXF5 182 aa10.6□□□□□ -0.71
LINC00838-201ENST00000562956 UIMC1Q96RL1 719 aa10.6□□□□□ -0.71
LINC00838-201ENST00000562956 LRWD1Q9UFC0 647 aa10.6□□□□□ -0.71
LINC00838-201ENST00000562956 NFE2L3Q9Y4A8 694 aa10.6□□□□□ -0.71
LINC00838-201ENST00000562956 GCFC2P16383 781 aaKnown RBP10.6□□□□□ -0.71
LINC00838-201ENST00000562956 ERCC5P28715 1186 aaPredicted RBP10.6□□□□□ -0.71
LINC00838-201ENST00000562956 AP3B2Q13367 1082 aa10.6□□□□□ -0.71
LINC00838-201ENST00000562956 TMEM266Q2M3C6 531 aa10.6□□□□□ -0.71
LINC00838-201ENST00000562956 PRAMEF18Q5VWM3 479 aa10.6□□□□□ -0.71
LINC00838-201ENST00000562956 CHURC1Q8WUH1 139 aa10.6□□□□□ -0.71
LINC00838-201ENST00000562956 FEZ1Q99689 392 aa10.6□□□□□ -0.71
LINC00838-201ENST00000562956 RANBP17Q9H2T7 1088 aaKnown RBP10.6□□□□□ -0.71
LINC00838-201ENST00000562956 H7C1D1 291 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 USP11P51784 963 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 CBX1P83916 185 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 ARHGAP4P98171 946 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 LRMPQ12912 555 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 DGKZQ13574 1117 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 ARID5BQ14865 1188 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 ANGEL2Q5VTE6 544 aaKnown RBP10.59□□□□□ -0.71
LINC00838-201ENST00000562956 C17orf53Q8N3J3 647 aaPredicted RBP10.59□□□□□ -0.71
LINC00838-201ENST00000562956 SPON1Q9HCB6 807 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 PYCARDQ9ULZ3 195 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 CTNND1O60716 968 aaKnown RBP10.59□□□□□ -0.71
LINC00838-201ENST00000562956 PLA2G6O60733 806 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 SERPINC1P01008 464 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 ZNF18P17022 549 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 INPP5BP32019 993 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 STX17P56962 302 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 GRB10Q13322 594 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 PDIA5Q14554 519 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms